Pcoq004419.1
Basic Information
- Insect
- Proctacanthus coquilletti
- Gene Symbol
- nfxl1
- Assembly
- GCA_001932985.1
- Location
- MNCL01000065.1:393464-396911[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.7e+04 -5.1 1.9 15 19 171 175 171 175 0.85 2 19 0.09 1.2e+03 0.2 0.4 4 10 206 212 205 212 0.96 3 19 2.9e-08 0.00039 20.9 16.6 1 19 220 237 220 237 0.99 4 19 1.4 1.9e+04 -3.7 0.9 5 10 262 267 262 267 0.91 5 19 3.1e-05 0.41 11.3 15.5 1 19 273 292 273 292 0.96 6 19 1.4 1.8e+04 -3.6 1.8 6 10 317 321 316 321 0.89 7 19 2e-08 0.00027 21.4 11.3 1 19 327 345 327 345 0.99 8 19 0.92 1.2e+04 -3.0 0.5 1 7 370 375 369 377 0.49 9 19 1.5e-07 0.002 18.7 10.8 1 18 380 397 380 398 0.96 10 19 1.7e-06 0.022 15.3 18.8 1 18 432 449 432 450 0.98 11 19 2.1e-08 0.00028 21.4 12.1 3 18 461 476 459 477 0.91 12 19 1.5 2e+04 -3.7 1.9 5 10 505 510 505 510 0.73 13 19 1.6 2.1e+04 -3.8 0.5 9 12 515 518 514 520 0.72 14 19 0.12 1.6e+03 -0.2 6.9 10 19 524 533 521 533 0.91 15 19 0.027 3.6e+02 1.9 5.7 4 12 547 555 545 555 0.89 16 19 0.72 9.6e+03 -2.7 0.9 6 10 616 620 615 620 0.89 17 19 6.1e-07 0.0081 16.7 7.2 1 12 626 637 626 637 0.97 18 19 0.019 2.5e+02 2.4 15.1 3 19 666 682 665 682 0.91 19 19 3.1e-06 0.041 14.5 11.9 1 16 733 747 733 753 0.87
Sequence Information
- Coding Sequence
- ATGTCTGCAAATCCTtggaaaattacttcaaaaccGGAACCAAGGAAGGCAAACATtatgaaaaatcataaaaagcaCGAGTGTACCAACGAGGTGGCACAgaagaaatttgaagaagtccaagcgaaaaatattgagaaagcGAAAACCTATACTGAGAATTACAATTCCAGTTCTGATGAAGAGGAAGAATTAAACACCGGTGATATTCTAAtgaaattgtttaaatattatgcCGGAGAACGGAATCAGCTTTCGAAAACAGAAGCTTTCTTAGAGAACTTTTTGCAGTCGGGATCCGCTATATGCTTGATTTGCATAGGAACTGTTAAGCGAAATGATTCGATTTGGTCGTGCAAGAACTGCTATTGCTTTTTCCATCTTCAATGCATTAAACGTTGGGGAAACGATAGCATTTCTCAACAAAAGATTACTGTAAACGAGGAGCAAGgctattataataatttaggaCAATATGTGCCTAAGAAGATAAAGCAGATTAAGTGGTATTGTCCCAAATGCAGAAAGGAATACCATCCAGAAGACATTCCGAAAGTGTATGTTTGCTTCTGCGAGAAGGAGATCAATCCTAACCCACATCCTTGGACAATCCCACATTCGTGCGGTGAGCTTTGTGAGAAATACCTTGTACCCGATTGCGGCCACAGATGCCTACTTCTTTGCCATCCAGGACCATGCCCTCCTTGTCCGCAAAGCATTTTGACTTCATGCAAGTGCAAGAAATCTAAACCTAAGTCGATCAGGTGCTTTCAGAAATCGTGGACTTGTGATTCTAAATGCCAATGTCTATTGGCTTGTGGCATTCATAAATGCGAACAGGGATGTCACAGTCCACGTGAGTGCCCTCCTTGCACAAAGAAAAGTAAGCAAAGGTGCCAGTGTGGGGCAGAGATGTCTGAACGAAACTGCTCTGAACTCATTTGGCAATGTAAGAAGGTCTGCAACAAGCCCTACAGTTGTGGCATTCATAAGTGCAAAAAAGTATGCCACGCCGACGACTGTGGCACTTGTCCATTAGGACTTCCAAGATCTTGCCCCTGTGGGAAAactAAAACCGTTGCGCCTTGCAGTGAGGTCATAGACACCTGTGGAGATACTTGCCAAAAACTCCTCGCTTGTGGGCTTCATAACTGTACACAAAGGTGCCATAAAGGCGAATGCAGTCTTTGTCTAACTATTGTCGAAAAAAAATGCCGATGTGGTCTTCGAACGAAGGAGCAACCATGCTCTCGTCCATTTATTTGTGAAACCAAATGCAAGCAGATTAGGGACTGTGGAAAGCATCCGTGTAACAAAAAGTGCTGCGACGGCCAATGTCCTCCATGCGATAAAATATGCTCAAAAACCCTTTCgtgtaaaaaacataaatgtaAGTCTGTTTGCCACGATGGTCCTTGTTATCCATGCGATTTAAAATCGCAAGTTAAGTGCCGATGTGGTTTTACATCAATAACAGTGCCTTGcggaagagaaaaaaagactCGGTCCCCAAAATGTCACCAACCGTGCAGAATTGCATCGAAATGCCACCACCAAAACCCTCACAACTGCCACATGAACGAGTGTCCACCGTGCACACAAAGATGTAACCTCAAGAACGACGTAACCAACTGCGACCACCCCTGTGAGGCCAAGTGCCACGATGCTGTAAAAGTAGCAGTAGATCCCAGAAATCAAAAGCCAGTCAGCATTTGGGAATGGAATGTAGAGAAGtttgaaattaaaaaactgccGCATCCACGTTGCGAAGTCAAAGTTATGGTAACCTGCCTGGGAGGTCACGAGACAGCGCTTTGGCCCTGCTGGAATTCGAAGCCTAGCTCGTGTGAGAAGATTTGCGGACGAGTTTTGAAATGTGGTAATCACACTTGCCAAAGGATATGCCACTCCGTTGCTAACATCGAGAACAAAAACGAGCAAGAGGGCTGCATTTCTTGCGAGGAGGAATGCAAGATACCGAGAACCAATGGGTGTACACATCCCTGTCGAAAACCTTGCCACTTGGCCCCTTGTACACCCTGTACAGTTACTGTGAAGTCAAATTGCCATTGTGGTCTGGGCCAGGTGTACTACAAGTGTTCCGAATTTAATAGAACCGACATTAATCTTGAGTCCTTGCAAAAACTCCGAGATCAACTTAAAAGTTGTGGCAATCGATGTATTAAGAATTACACTTGTGGTCATCGGTGTGTATCTGTTTGCCACGCAGGTGAATGTCCCGACCcggaaaagtgtaaaaaaaaggtaaagatTTATTGCAAATGTAAGAACTTGAAGGCGGAAATTACGTGCGAGAAATATCGCAATGGATTCACCATTATTTCTTGCGACGATGTCTGTGCTCAGAAAATGGAAGCTGAAGAACGAGCTAAACACGAAATGGAAGAAAAGCGACGAAAACTGGAAGAAGAGAAAAACCGTCTAGAACTGGAGCAATTCGagaaaaagtttggaaaaaagaaacaccGCGAACGAAAAGTTTACGAGCAAACTCCAGAAGGGAAAAACCTTGAAATTCTGTGGATCATTTCCAGCGTTCTATCAGTAACATTCGCAGTACTTTTGGctatttatttcctaaattgA
- Protein Sequence
- MSANPWKITSKPEPRKANIMKNHKKHECTNEVAQKKFEEVQAKNIEKAKTYTENYNSSSDEEEELNTGDILMKLFKYYAGERNQLSKTEAFLENFLQSGSAICLICIGTVKRNDSIWSCKNCYCFFHLQCIKRWGNDSISQQKITVNEEQGYYNNLGQYVPKKIKQIKWYCPKCRKEYHPEDIPKVYVCFCEKEINPNPHPWTIPHSCGELCEKYLVPDCGHRCLLLCHPGPCPPCPQSILTSCKCKKSKPKSIRCFQKSWTCDSKCQCLLACGIHKCEQGCHSPRECPPCTKKSKQRCQCGAEMSERNCSELIWQCKKVCNKPYSCGIHKCKKVCHADDCGTCPLGLPRSCPCGKTKTVAPCSEVIDTCGDTCQKLLACGLHNCTQRCHKGECSLCLTIVEKKCRCGLRTKEQPCSRPFICETKCKQIRDCGKHPCNKKCCDGQCPPCDKICSKTLSCKKHKCKSVCHDGPCYPCDLKSQVKCRCGFTSITVPCGREKKTRSPKCHQPCRIASKCHHQNPHNCHMNECPPCTQRCNLKNDVTNCDHPCEAKCHDAVKVAVDPRNQKPVSIWEWNVEKFEIKKLPHPRCEVKVMVTCLGGHETALWPCWNSKPSSCEKICGRVLKCGNHTCQRICHSVANIENKNEQEGCISCEEECKIPRTNGCTHPCRKPCHLAPCTPCTVTVKSNCHCGLGQVYYKCSEFNRTDINLESLQKLRDQLKSCGNRCIKNYTCGHRCVSVCHAGECPDPEKCKKKVKIYCKCKNLKAEITCEKYRNGFTIISCDDVCAQKMEAEERAKHEMEEKRRKLEEEKNRLELEQFEKKFGKKKHRERKVYEQTPEGKNLEILWIISSVLSVTFAVLLAIYFLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00937704;
- 90% Identity
- -
- 80% Identity
- -