Ncya027460.1
Basic Information
- Insect
- Neoitamus cyanurus
- Gene Symbol
- nfxl1
- Assembly
- GCA_947538895.1
- Location
- OX384540.1:7730657-7737463[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.5 2.4e+04 -3.7 1.1 15 19 171 175 170 175 0.83 2 19 0.09 1.5e+03 0.2 0.4 4 10 206 212 205 212 0.96 3 19 3.4e-07 0.0056 17.5 20.6 1 19 220 237 220 237 0.99 4 19 1.4 2.4e+04 -3.7 0.9 5 10 262 267 262 267 0.91 5 19 0.00051 8.4 7.4 16.4 1 19 273 292 273 292 0.96 6 19 1.4 2.3e+04 -3.6 1.8 6 10 317 321 316 321 0.89 7 19 3.6e-08 0.00059 20.6 14.2 1 19 327 345 327 345 0.99 8 19 1e-07 0.0016 19.2 10.0 1 18 380 397 380 398 0.96 9 19 2 3.3e+04 -5.0 2.3 5 10 421 426 421 426 0.91 10 19 4.2e-07 0.0069 17.2 16.5 1 18 432 449 432 450 0.98 11 19 2.1e-08 0.00034 21.4 12.1 3 18 461 476 459 477 0.91 12 19 0.23 3.8e+03 -1.1 2.1 5 10 505 510 505 510 0.93 13 19 0.18 3e+03 -0.8 10.6 8 19 522 533 514 533 0.88 14 19 0.012 2e+02 3.0 5.3 3 12 546 555 536 555 0.85 15 19 0.57 9.4e+03 -2.4 0.7 6 10 616 620 615 620 0.90 16 19 5.7e-07 0.0094 16.8 7.8 1 12 626 637 626 637 0.96 17 19 0.0066 1.1e+02 3.8 11.7 1 19 665 682 665 682 0.93 18 19 1.1e-06 0.017 15.9 11.1 1 16 733 747 733 753 0.87 19 19 2 3.3e+04 -4.4 0.9 6 10 782 786 782 786 0.94
Sequence Information
- Coding Sequence
- ATGTCTGGAAATCCTTGGAAAAAAGCATCCAAACCAGAAAAGAAAAAGTCGGAGAATACCAAAAGTCATAAAAAGCTTGAGAATGTTAATCAAGTAGCAATTAAAAAATTTGAAGAGATTCAAACAAGAAATATTGAGAAAGCCAAAGCTTATACGGAGAATTGCAGCTCTAGCTCAGACGAAGAGGAGGAACTAAACACCGGGGACATTTTGGAGAAACTGTTCAGGGAATATTCCGGTGAACGCAGTCAACTTTCGAAGATTGGGACTTTCCTAGAGAACTTCTTGCAGTCGGGTTCAGCTATTTGTTTAATTTGTATAGGAACTGTGAAGAGAAATAATTCTATCTGGTCATGCAAGAGCTGCTTCTGTTTCTTCCATTTTCAATGTATTAAACGCTGGGGCAACGACAGCATTTCACAGCAGAAGTGCAGTGTAAATGACGAGCAAGGTTATTACAATAACTTGGGGGAATATGTACCAAAGAAAGTTAAATTAATTAAGTGGCATTGTCCCAAGTGTAGGAAGGAGTACAATCCTGATGATATTCCCACAGTATATACCTGCTTCTGCGGGAAGGAAATCAATCCCATCGCGCATCCATGGACAATCCCACACTCGTGTGGAGAGCTATGTGAGAAATACCTGGTACCTGATTGTGGGCACAGATGTCATCTCCTCTGTCACCCTGGACCATGTCCACCTTGTCCCCAGAGCATTTTTACTTCTTGCAAATGCAGGCAATCCAAGCCGAAATCTATAAGATGTTTTCAGAAGACATGGACATGCGATTCTAAATGCCTTCGCATATTAGCTTGTGGGAGTCACAAATGTGGAAAAGAATGTCACAGTCCAGAAGAATGCCCTCCCTGCACAAAGAAAAGCAAACAAAGCTGCCAATGCGGAGCGGAAATTTCAGAAAGAAGTTGCTCTGAGCTATTATGGCAGTGCAAAAAGGTCTGCGACAAATATTATAGCTGCGGTATTCACAAGTGTAAGAAGGTGTGCCACACTGGTGGATGTAGTAATTGCCCACTAGGACTCCCAAGGTCTTGTCCATGCGGAAAAACTAAAACCATTGCACCCTGCAGTGAAGTCATAGACACTTGTGGCGATACATGCCAAAAGATGTTGGCGTGTGGGCTTCACAATTGTGCGCAAAGGTGCCACAAAGGAGAATGCAGTCTATGCTTGACCTTAGTTGAAAAGAAGTGCCGCTGTGGATTACGTTCTAAGGAACAGCCATGTTCTCGTATTTTCACTTGTGAAACAAAATGTAAACAAATTAGAGATTGTGGAAAGCATATGTGTAACAAGAAATGCTGTGATGGCCAATGCCCACCATGCGACAAAATATGTGCGAAAACTCTATCATGCAAAAAACATAAATGTAAATCTGTTTGCCACGATGGCCCTTGCTACCCCTGCGATTTAAAATCACAAGTTAAATGTCGATGTGGCTACACATCGATAACAGTGCTCTGCGGTAGGGAGAAAAAGACTCGTCCTCCAAAATGCCAACAGCCTTGCAGAATTCCATCAAAATGCCACCACCAAAACCCTCACGTCTGTCATCTGAACGAGTGTCCACCTTGTACGCAAAGATGTGGCTTGAAAAATGAAGTATCGAATTGTGAGCACCCTTGTGAAGCTAAATGCCATGATGCAGTAAAAGTTGCCGTAAACGCTAAAAATCTAAAACCAGCTAGTATTTGGGACTGGAATATAGATAAGTTTGAAATTAAAAAGATGCCACACCCGCGTTGTGAAGTAAAAGTAATGGTAACTTGCATAGGAGGTCATGAGACGGCAATTTGGCCCTGCTGGAATTCAAAGCCTAACTCATGCGAAAGGATATGCGGAAGAGCTTTAAAATGTGGTAATCATACTTGTCAGCGGGTTTGCCACACGCTTCCCAGCATAGAGGATAAATATGAACAAGAAGGCTGTATACCTTGCGAGCAACAATGTAATATACCAAGGCCTGCTGGATGTTCACATCCGTGCCGAAAGGCCTGCCACATAGCTCCGTGTGCACCCTGTACAATAACGCTCAAAATAAATTGTCACTGCGGCCTTGGTCAAGTTTACAATAAATGTTCTGATTTTAGCAGAACAGATCTCGATCCTGACTCATTGCAAATATTTCGTGACCAACTGAAAAGTTGCGGCAACAGGTGTATTAAGAATTTAGTTTGTGGCCATCGATGCATGTCGATATGCCATGCAGGTGAATGCCCTGATCCGGAAAAATGCAAGAAAAAAGTAAAAATTTATTGTAAGTGTAAAAACTTGAAAGCAGAAATTACATGCGAAAGGTCTCGTAAAGGTTTTACCATTCCTTGCGACGAATTATGTGCTCAAAACCGGGAAGCTGAAGAACGAATCAAGCGAAATGCAGAGGAAAAACAACGAAAACTTGAAGAAGAGAAAAACCGTTTAGAATTGGAGCAATTTGAAAAGAAATTCGGGAAGAAAAAACATCGTGAGAGGAAGATCTATGAGAAAACTCCACAAGAGAACAGTTTTAAACTTTTATGGGTGTTGTCGGGTGCTGCAGCAGTGATTTTGTCTATACTTTTTGCCACTTACTTTTTAAAATAA
- Protein Sequence
- MSGNPWKKASKPEKKKSENTKSHKKLENVNQVAIKKFEEIQTRNIEKAKAYTENCSSSSDEEEELNTGDILEKLFREYSGERSQLSKIGTFLENFLQSGSAICLICIGTVKRNNSIWSCKSCFCFFHFQCIKRWGNDSISQQKCSVNDEQGYYNNLGEYVPKKVKLIKWHCPKCRKEYNPDDIPTVYTCFCGKEINPIAHPWTIPHSCGELCEKYLVPDCGHRCHLLCHPGPCPPCPQSIFTSCKCRQSKPKSIRCFQKTWTCDSKCLRILACGSHKCGKECHSPEECPPCTKKSKQSCQCGAEISERSCSELLWQCKKVCDKYYSCGIHKCKKVCHTGGCSNCPLGLPRSCPCGKTKTIAPCSEVIDTCGDTCQKMLACGLHNCAQRCHKGECSLCLTLVEKKCRCGLRSKEQPCSRIFTCETKCKQIRDCGKHMCNKKCCDGQCPPCDKICAKTLSCKKHKCKSVCHDGPCYPCDLKSQVKCRCGYTSITVLCGREKKTRPPKCQQPCRIPSKCHHQNPHVCHLNECPPCTQRCGLKNEVSNCEHPCEAKCHDAVKVAVNAKNLKPASIWDWNIDKFEIKKMPHPRCEVKVMVTCIGGHETAIWPCWNSKPNSCERICGRALKCGNHTCQRVCHTLPSIEDKYEQEGCIPCEQQCNIPRPAGCSHPCRKACHIAPCAPCTITLKINCHCGLGQVYNKCSDFSRTDLDPDSLQIFRDQLKSCGNRCIKNLVCGHRCMSICHAGECPDPEKCKKKVKIYCKCKNLKAEITCERSRKGFTIPCDELCAQNREAEERIKRNAEEKQRKLEEEKNRLELEQFEKKFGKKKHRERKIYEKTPQENSFKLLWVLSGAAAVILSILFATYFLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00937704;
- 90% Identity
- -
- 80% Identity
- -