Basic Information

Insect: Lordiphosa clarofinis
Gene Symbol: -
Assembly: GCA_018904275.1
Location: JAEIGQ010000353.1:139565-151945[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.013 0.66 10.6 0.3 1 23 1203 1226 1203 1226 0.95

2 12 0.00023 0.012 16.1 2.7 2 23 1400 1421 1400 1421 0.97

3 12 0.00015 0.0077 16.7 0.9 3 23 1429 1449 1427 1449 0.98

4 12 7.5e-07 3.8e-05 24.0 4.1 2 23 1456 1477 1455 1477 0.97

5 12 7.1 3.6e+02 2.0 0.4 5 23 1490 1508 1488 1508 0.96

6 12 1.8 90 3.9 5.4 3 23 1515 1536 1513 1536 0.93

7 12 0.19 9.5 7.0 0.2 2 23 1547 1567 1546 1567 0.96

8 12 7.2e-05 0.0036 17.8 0.4 1 19 1573 1591 1573 1595 0.95

9 12 4.5e-05 0.0023 18.4 0.4 1 23 1603 1625 1603 1625 0.98

10 12 0.00013 0.0068 16.9 7.6 1 23 1631 1653 1631 1654 0.96

11 12 0.00026 0.013 16.0 5.9 1 23 1659 1681 1659 1681 0.98

12 12 0.037 1.9 9.2 8.2 1 23 1687 1709 1687 1710 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.013	0.66	10.6	0.3	1	23	1203	1226	1203	1226	0.95
2	12	0.00023	0.012	16.1	2.7	2	23	1400	1421	1400	1421	0.97
3	12	0.00015	0.0077	16.7	0.9	3	23	1429	1449	1427	1449	0.98
4	12	7.5e-07	3.8e-05	24.0	4.1	2	23	1456	1477	1455	1477	0.97
5	12	7.1	3.6e+02	2.0	0.4	5	23	1490	1508	1488	1508	0.96
6	12	1.8	90	3.9	5.4	3	23	1515	1536	1513	1536	0.93
7	12	0.19	9.5	7.0	0.2	2	23	1547	1567	1546	1567	0.96
8	12	7.2e-05	0.0036	17.8	0.4	1	19	1573	1591	1573	1595	0.95
9	12	4.5e-05	0.0023	18.4	0.4	1	23	1603	1625	1603	1625	0.98
10	12	0.00013	0.0068	16.9	7.6	1	23	1631	1653	1631	1654	0.96
11	12	0.00026	0.013	16.0	5.9	1	23	1659	1681	1659	1681	0.98
12	12	0.037	1.9	9.2	8.2	1	23	1687	1709	1687	1710	0.95

Sequence Information

Coding Sequence: ATGGTCGAAAGCGTGCAGTGCCCCGTGTGCACTTTGTACTTGCATGCGGGCATGAACCTGTCCGATCACTTGGAGACGCACCCCAAAGAGCAGGTCATTAAAGCATTGGTCCAAATGACAATCAGTGGCAACAGTGGCATGGGGAGTGCCTTAGCGGCCGCCATGCTGACTGGTGGGGGCAGTGGCGTTAACATAGACACCGGCGACTCCACATCAACCGCTGATGTAAAACCAGCAATAGAGGAGACCTCTACAGCAAAGGCAACGCCATCGCCAGCCTCCCTGCCACCGCCCCCGCTATCCTCGTCCGCTCCCTCCTCTGCCAGCAGCAACAGCAAAATAAATAATCCACCGACTAAGGCACTGAAAAGCGCAACGCCCACGACTGAGGCGGCAGCCAACCCATCCGCACCCACCACAAGCAGCGTAAGCGCTGTGTATCAGCCATCGTTGTCCACATCAGACTATCGCTACGACCAGCAATCGGCACAGCAGCACGGGTTCTCGCGAACTGCCACCGCCACCTTGGTGATACCACAGGTGCCGCAGCAGCATTTCCTAGCCAGTCAGCAACAGCAACATGCTCTCTTTGCTCACCAACAGCAATCTGGACTGAAGTATACCTACGCCACCACGCTGCCGCCTCCACCACCCCTGCAGCTCTTCGCACAGCAGCAGCAATCGGCCACGCAGTCCCCATCACATCAAAAGCCGCCACCCGCCTATGGAGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAACAAACAGCAGCAACACCAACAACTAACCTTGCACCATAACATGGCCCTGGCACCACCGACAACAGCAGCTGGAAAGCCCAGCAAAGTCCAGACGGAAGTATTTTTGAATCCCCCACCACCGCCACCGCCGCCACCACCGGCAACGCAGTCGCAACTGCACCACCAGCAGCAAGTGGCATTAACAACATCCTCCACAAGACTGCAAATACAGCCATCAGTTCCACTCCAACCGTACTCCTCAATTGGAAACATTTGCTCCTCCACCACATCAACGGCTGTTGCTGGTCGAGCCAGTCGTCAAACCAATTCACCTTTTGGAGCGCTGCTTAATGCAGCGGCAGCTGCTGCCTGCGCCTCACCCTCATCGGCCTCGTCAGTGCTGCGCTTTGCCGAATCGCCAGTGGCTCACTACCTGGAGCGTGAGAACGGCGACTTCATTGTCCAGGAGACGCCTAAGCATATTGTGGAGTGCGTTGAAAAGGAAGATGGCGAATTCTCAGTGATTGAACGCATTTATCAGTCGCCGCCGAGTGTACTCCATATACACGACGAGAACGAGGATGAGAACGACGACGAAGACGAAGAAGAAGACGAGGATGAAGCGGAGCAGGATGAGCCGTCCGATCATGTGGACGATGGCGATGACGAGCAAGAGGACAACAGTAGAAGCCGCTGCCGCAGCCGAAATGCTCCGAAAAACACAAAGAAGTCGCGCAAGTCAAAGCCCAAGCGAACATCCAAACAGCCTACATCGGATGAGGAGGAGTTCATGAGCATAAGCAGCGGCGTAGAAAGTGAGTCAGAAGGGGACGAGCGAGAGGAAAAGGTTAAGCAGTTTGAGGTGCCACCACCGCCGCTCTGCACGGCTCCATCCACAAGCAATGCGGCTGCCGCTGCAGCCTCAGCCACCTCATCCACCTCAGGCGATGGCAATTCCAACTCCAATTCCACTTCCACTGCCGCCAAGTCCAAGAAGAATCGCATTACCGTGCTCAGTGATGTTCCGCTGAATATGAACGAGTATTTAGATCTGATGGGCAACATTGTCGCCTCCAGTCGGATTGGGGCGGCACGTCCTTTTGCCGCTGTGGCACCCATTCCCCTGGTCAAAGTGGAAAAGGAGGAGCCTCTGGATGACTATGACAACGTCACGCAAACTGAGTGCACGCCGCCCGTGGAGCAGAAGCCCACGTTGGGCACCACCAGCGTCATCCGAATGGCCAGCACCAGCATCACAGCTCCCGAGGATCTCACCCAGACTCCGGCAATGAAAATCGAGGTGGATGTTGAGAGCACGACGTTGTTGCCCCAACGGTTCTCGGCCCCGGCCCAGCAGCGTGGGCCCAAGAAATTAGTCATCAAACCAAAGGCCACGGCCACGACGACAACACAAAAGACTGACACCCCATCTTCCGGCAGTTCCGAGCAGCTGCTGCTTTCCTCCATATCAAATGGAACCCCCGTTACGGCTCCCACCTCAGAGATGGTCCAGATCAAGAGCGAGAAGATGGATGTGCCCACAACAGGCAGCATCCTGGAGAAGCATCTGACCACTCGCCCACTCCACTCGACCATCAACGATGACGATGCTCGTGTGCTACTGGATTTCGCCAACTCCAAGCAGCCGCCGCCCCCAGCCGGTGGCGCCTCCAACACCACATTCGTGGTGGGTGCTGCTGCCGCCCCCACCTGTTTCCCCTCGGCTGGCTCCGTTTTCGCCAGCAGCACAACAACTATGCAGAAAGCGTGCAAGCCGGGCGAGGAATACATTCTGCCCGATAATAATCTGGAGGCGGATGAAATTGTGATATCCTCGTCTTCCTTCGCTTCATCCTCGCAGAGGCATGCGCAGGCGCAGCCTGATCTGGCCACCACATCAGTGCAGCCGAACACATCTGGCGCTTCTTTCAATGAGTTCAATTTTCTTTACCATCAATCCACAACGACAACCACGACTACTTCGGCGGTTGGTGCCTACTTCTCACCTTTTGCCAGGCAGCAGCAGCACACTCAGCATGGAGCTAGCGAGGCCACCAATGCCGCCACACTGGCGTCCTCCTCGAGCAACTCCTCGGCCATGGACCACGACTCTATGAATGCTACTTTCCGTGTGGCCAAAACGCAATCCTCGCACTCCTGGTACCAGCCAGTACAGCCAGCGTCAGCGGCAACTGGAGCGTCGTCATCCTCGCACAACCACGACATGGCACAGCCAACCAACTTTAATGCGGCCTTGGCTGCAGTCGACTGCTGCAACGTGGGCGTTGACAGCGAAGTCAAGTACTTGGATCTGGATGCCTGCAAGCGGGAACAGCTCAGCAACAGCAGTAATCTGCCCTCCGCCTCGGCTTCCGCATCCACCACATCTTCTTCATTTGCCGGAGCTGCCACGGAGAGCAGCTTGGTTGGGGGTCTCAACATACGCACCGATGAGAAAATGCCCGCCAAGGGCGAAATCTCCGAGCAGGAGAGCAACTGCGACATTGAGAACTCCTGGAGTCAGTCGATGTATGGCGACATATCACAGCGGTACTTTAGAAACCAGTTTTCAGGCGGCTACAATCCCGACTGGCGGCAGGACTACTATCCGGCTCAGGATCTCAGTGCGCAGCAGCGCGAGCTTAAACGCTTCGACTTCACAGCGGTCGACGAGGAGGCCTCCTGTAGCTCCAAGAAAAGCCATTTGCTGGATGGCGTAGATACACCCACTGTTTTTTCATCCTCATCGGCTTTGCTGGCTGGTCCACCAATAGCCTCCACATCCAGGGCAGCCGCTGAAGCTGCGGCGGTGGCTGCAGCAGCGGCTGCGGCCCAGCGGAAGCCGCCGCGTCGCAAGATTTATAAATGTCCGCACTGCGAGGCAATTTTCGAGAAGCTCAAGGATCGCAATGCGCACATGATTGGCGAGCACAATTATGTGCGCCAAAATCGCCGCCTAATTTGCACTCAGCCGCTGGACAACTCATCTATGTTACCGCCACAGCAGCAGCCATTATTGCCGCTCCAAGTGGACCCCAGCATGGTCAGCGGAATCATACAAGAGGATTCCAAGGACGGCATTGTCAAGATCAAGCAAGAACAGTGCGCGGATAAGCAAGAGTCTGAAGAACAACTTCATACTCATGCCGAACTGACGGACATCAAGACTGCCGAGCTGCTTGGCGATGGTGACATAAAGCCACCCAGTGTGGCTCAACTGGACGAGAAGCCGGCCATAGTGCCGCTGGCTATGACCACGCCCGCTGCCAAGCTGGAAGCGCTTTATCGCATGTTAATTGCCTACAACGAATCGAAACTGGGCCAGGAGCGCAACAATATCAGTGAGCTGGAGCAGAAGGCCATGGAGAAGTCGATCTTTCTCTGTTACGTTTGTCGCACAGATTTCCCCTCTGTCAAGCTCTACGATGCGCATCTCACGGAACATCCCGCCGAGTGTTTCACCTGTGGCAAGAAATTTTATCGCTGGAAGAACTTCTCGCTGCATTTGAAGCGTCATCTGGGCTGGAAAGAGTTCGGCTGCTGTGTGTGTGACAAGAAGTTTGTGGTGCGAAGCGCTCTTGTGGAGCACATGCGTATGCATACCGGCCAAACGCCGCTCAAGTGCAAGATATGCGGCAAAAAATTCAAGCGTTACTCCAACTTGACGCAGCATCGGAAGCGGCACACCAAAATGATGGTACGCAAAAAGGAATATGTGTGCCATTGCGGCGAGGTGCTGCCCTCAAAGGCCCGCTTCCTGTGGCACAAGGAGACACACGATCTGAAGCCCAAGTGCTGTCCCTACTGCTGCGATAGGTTCGTGCATGCCAACTCTCTGCGCCGACATATTCGACTGGCCCACTCCGACAAGTTCGACTATGCCGAGCCCATGGAGTGTCCCATGTGTAAGCAAATTTTTGCGAAGACATCCATCAAGGCGCACATGGCCACGCACTCCACGGATCCGCAGTACGACTGCGCCATTTGCAATAAGAGCTTCTCCACCAAATGGAATCTCAAGATACACTCGTGGGTGCACGCCAACCGTACCGCTAAGCCCTTCAAGTGCGAGTACTGCCCCAAGGCGTTTGTGCGCGAGCTGGACTTTAAGAATCACATCAATGCGCACAAGCAGATCAAGCCGTACACCTGCGAGTACTGTGGCTGCAAGTTCATACGCAAGTACAACTACATGCGGCACCGGCGCGAGCACCATGGCAATAAGAAGTTCACCTGCGATCAGTGCGATAAGTCCTTCCATCGGCACTACTATCTCATCGAGCACCGGCGCATCCACACCGGCGAGCGGCCCTTTCACTGCACCATCTGCGGCAAGAGCTCCACCACCAAAACCAATCACAACAAGCATCTAAAGATCCATCACTCCCGCGACCCCTTCACCGTGGAGGTCTAA
Protein Sequence: MVESVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTISGNSGMGSALAAAMLTGGGSGVNIDTGDSTSTADVKPAIEETSTAKATPSPASLPPPPLSSSAPSSASSNSKINNPPTKALKSATPTTEAAANPSAPTTSSVSAVYQPSLSTSDYRYDQQSAQQHGFSRTATATLVIPQVPQQHFLASQQQQHALFAHQQQSGLKYTYATTLPPPPPLQLFAQQQQSATQSPSHQKPPPAYGAAISQIRSQHNQNKQQQHQQLTLHHNMALAPPTTAAGKPSKVQTEVFLNPPPPPPPPPPATQSQLHHQQQVALTTSSTRLQIQPSVPLQPYSSIGNICSSTTSTAVAGRASRQTNSPFGALLNAAAAAACASPSSASSVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDENEDENDDEDEEEDEDEAEQDEPSDHVDDGDDEQEDNSRSRCRSRNAPKNTKKSRKSKPKRTSKQPTSDEEEFMSISSGVESESEGDEREEKVKQFEVPPPPLCTAPSTSNAAAAAASATSSTSGDGNSNSNSTSTAAKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDDYDNVTQTECTPPVEQKPTLGTTSVIRMASTSITAPEDLTQTPAMKIEVDVESTTLLPQRFSAPAQQRGPKKLVIKPKATATTTTQKTDTPSSGSSEQLLLSSISNGTPVTAPTSEMVQIKSEKMDVPTTGSILEKHLTTRPLHSTINDDDARVLLDFANSKQPPPPAGGASNTTFVVGAAAAPTCFPSAGSVFASSTTTMQKACKPGEEYILPDNNLEADEIVISSSSFASSSQRHAQAQPDLATTSVQPNTSGASFNEFNFLYHQSTTTTTTTSAVGAYFSPFARQQQHTQHGASEATNAATLASSSSNSSAMDHDSMNATFRVAKTQSSHSWYQPVQPASAATGASSSSHNHDMAQPTNFNAALAAVDCCNVGVDSEVKYLDLDACKREQLSNSSNLPSASASASTTSSSFAGAATESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSGGYNPDWRQDYYPAQDLSAQQRELKRFDFTAVDEEASCSSKKSHLLDGVDTPTVFSSSSALLAGPPIASTSRAAAEAAAVAAAAAAAQRKPPRRKIYKCPHCEAIFEKLKDRNAHMIGEHNYVRQNRRLICTQPLDNSSMLPPQQQPLLPLQVDPSMVSGIIQEDSKDGIVKIKQEQCADKQESEEQLHTHAELTDIKTAELLGDGDIKPPSVAQLDEKPAIVPLAMTTPAAKLEALYRMLIAYNESKLGQERNNISELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00919318; iTF_00914744; iTF_00918440; iTF_00920093; iTF_00916565; iTF_00917656;
90% Identity: iTF_00917656;
80% Identity: -