Basic Information

Insect: Lordiphosa magnipectinata
Gene Symbol: -
Assembly: GCA_018904285.1
Location: JBAMBO010001227.1:182596-192158[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.013 1 10.6 0.3 1 23 1209 1232 1209 1232 0.95

2 12 0.00024 0.018 16.1 2.7 2 23 1408 1429 1408 1429 0.97

3 12 0.00016 0.012 16.7 0.9 3 23 1437 1457 1435 1457 0.98

4 12 7.7e-07 5.8e-05 24.0 4.1 2 23 1464 1485 1463 1485 0.97

5 12 7.3 5.5e+02 2.0 0.4 5 23 1498 1516 1496 1516 0.96

6 12 1.8 1.4e+02 3.9 5.4 3 23 1523 1544 1521 1544 0.93

7 12 0.19 15 7.0 0.2 2 23 1555 1575 1554 1575 0.96

8 12 7.4e-05 0.0056 17.7 0.4 1 19 1581 1599 1581 1603 0.95

9 12 4.7e-05 0.0035 18.4 0.4 1 23 1611 1633 1611 1633 0.98

10 12 0.00014 0.01 16.9 7.6 1 23 1639 1661 1639 1662 0.96

11 12 0.00027 0.02 16.0 5.9 1 23 1667 1689 1667 1689 0.98

12 12 0.038 2.9 9.2 8.2 1 23 1695 1717 1695 1718 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.013	1	10.6	0.3	1	23	1209	1232	1209	1232	0.95
2	12	0.00024	0.018	16.1	2.7	2	23	1408	1429	1408	1429	0.97
3	12	0.00016	0.012	16.7	0.9	3	23	1437	1457	1435	1457	0.98
4	12	7.7e-07	5.8e-05	24.0	4.1	2	23	1464	1485	1463	1485	0.97
5	12	7.3	5.5e+02	2.0	0.4	5	23	1498	1516	1496	1516	0.96
6	12	1.8	1.4e+02	3.9	5.4	3	23	1523	1544	1521	1544	0.93
7	12	0.19	15	7.0	0.2	2	23	1555	1575	1554	1575	0.96
8	12	7.4e-05	0.0056	17.7	0.4	1	19	1581	1599	1581	1603	0.95
9	12	4.7e-05	0.0035	18.4	0.4	1	23	1611	1633	1611	1633	0.98
10	12	0.00014	0.01	16.9	7.6	1	23	1639	1661	1639	1662	0.96
11	12	0.00027	0.02	16.0	5.9	1	23	1667	1689	1667	1689	0.98
12	12	0.038	2.9	9.2	8.2	1	23	1695	1717	1695	1718	0.95

Sequence Information

Coding Sequence: ATGGTCGACAGCGTGCAGTGCCCCGTGTGCACTTTGTACTTGCATGCGGGCATGAATCTGTCCGATCACTTGGAGACGCACCCCAAAGAGCAGGTCATTAAAGCATTGGTCCAAATGACAATCAGTGGCAATAGTGGCATGGGGAGTGCCTTAGCGGCCGCCATGCTGTCTGGTGGTGGCAGTGGCGTTAACATAGATAACAAAACCGGCTCCTCCACATCAACTGCTGATGTAAAACCAGCAATAGAGGAGACCAGTACAGCAAAGGCAACACCATCGCCGGCCTCCCTGCCACCGCCACCGCTATCCTCCTCCACTCCCTCCTctgccagcagcaacagcaaattAAATAATCCACCGACTAAGGCACTGAAAAGCGCAACGCCCACGACTGAGGCGCCAGCCAACCCATCCGCACCCACCACAAGCAGCGTAACCGCTGTGTATCAGCCATCGTTGGCCACATCAGACTATCGCTACGACCAGCAGTctgcacagcagcagcagcaacacggGTTCTCGCGTACTGCCACCGCCACCTTGGTGATACCACAGGTGCCGCAGCAGCATTTCCTAGCCAGTCAGCAACAGCAACATGCGCTCTTTGCTCACCAACAGCAGTCTGGACTGAAATATACCTACGCCACAACGCTGCCGCCGCCACCACCATTGCAGCTCTTCGCACAGCAACAGCAATCGGCCACGCAGTCCCCTTCACATCAAAAGCCGCCACCCGCCTATGGAGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAACAAACAGCAGCAACACCAACACCTAACCTTGCACCATAACTTAGCCCTGGCACCACCGACAACAGCTGCTGGAAAGCCCAGCAAAGTCCATTCGGAAGTATTTTTGAATCCcccaccaccgccaccgccgccaCCACCGGCAACGCAGTCGCAACCGCATCACCAACAGCAAGTGGCTTTATCATCATCCTCCACAAGACTGCAGATACAGCCATCAATTCCACTCCAAACGTACTCCTCAATTGGAAACATTTGCTCCTCAACCACATCAACGGCTGTTGCTGGACGAGCCAGTCGTCAAACCAATTCACCCTTTGGGGCACTGCTCAATGCAGCGGCAGCTGCTGCCTGCGCCTCACCCTCATCGGCCTCATCAGTGCTGCGCTTTGCCGAATCACCAGTGGCTCACTATCTGGAGCGTGAGAATGGCGATTTCATTGTCCAGGAGACGCCTAAGCATATTGTGGAGTGCGTTGAGAAGGAAGATGGCGAATTCTCAGTGATTGAACGCATTTATCAGTCGCCGCCGAGTGTACTCCATATACACGATGAGAACGAGGATGagaacgacgacgacgacgaagaaGAAGACGAGGATGAAGCGGAGCAGGATGAGCCGTCCGATCATGTGGAGGATGGCGACGATGAGCAAGAGGACAACAGTCGAAGCCGCTGCCGCAGCCGAAATGCTCCGAAAACCATAAAGAAGTCTCGCAAGTCGAAGCCCAAGCGTACATCCAAGCAACCTACATCGGATGAGGAGGAATTCATGAGCATAAGCAGCAGCGTAGAAAGTGAATCAGAAGGCGACGAGCGAGATGAAAAGGTTAAACAGTTTGAGGTGCCACCACCGCCGCTCTGCACGGCTCCATCCACGAGCAGTGCGGCTGCCGCTGCAGCCTCCACCACCTCATCCACCTCAGGCGATGGCAATTCCAACTCTAATTCCATTTCCACTGCCACCAAGTCCAAGAAGAATCGAATTACCGTGCTCAGTGATGTTCCGCTGAATATGAACGAGTATTTGGATCTGATGGGCAACATTGTCGCCTCCAGTCGGATTGGGGCTGCACGTCCTTTTGCAGCTGTGGCACCCATTCCACTGGTCAAAGTGGAGAAGGAGGAGCCGCTGGATGACTATGACAATGTCACGCAAACTGAGTGCACGCCGCCCGTGGAGCAGAAGCCCACTTTGGGCACCACCAGCGTCATACGAATGGCTAGCACCAGCATCACAGCTCCCGAGGATCTCACCCAGACACCGGCAATGAAAATCGAGGTGGAAGTTGAAAGCACGACGTTGTTGCCTCAACGCTTCTCGGCCCCGGCCCAGCAGCGTGGGCCCAAGAAATTAGTCATCAAACCAAAGGCCACGGCCACGACGACAACACAAAAGACTGACACACCATCCTCCGGCAGTTCCGAACAGCTGCTGTTTTCCTCCATATCAGATGGAAACCCCGTTACGGCTCCCACCTCAGAGATGGTCCAGATCAAGAGCGAGAAGTTGGACACGCCCACTACAGGCAGCATCCTGGAGAAGCATCTGACCACTCGCCAACTCCACTCGACCATCAACGATGACGATGCTCGTGTGCTACTAGATTTTGCCAACTCCAAGCAGCCGCCGCCCCTAGCCGGTGGCGCCTCCAACACCACATTCGTGGTGGGTGCTGCCGCTCCAACCTGTTTCCCGTCGGCTGGCTCCGTTTTTGCCAGCAGCACAACAACCATGCAGAAAGCGTGCAAGCCGGGCGAGGAATACATTCTGCCCGATAATAATCTGGAGGCGGATGAAATTGTGATATCCTCGTCTTCCTTCGCTTCATCCTCACAGAGGCATGCGCAGGCGCAGGCTGATCTGGCCAGCACATCAGTGCAGCCGAACACAGCTGGAGCTTCTTTCAATGAATTCAATTTTCTTTACCATCAAtccacaacgacaacaacgacTACTTCGGCGGTTGGTGCCTACTTCTCACCTTTTgcccggcagcagcagcagcaccacacTCAGCATGGAGCCAGCGAGGCCACCAATGCCGCCACACTGGCCTCCTCCTCCAGCAACTCCTCGGCCATGGATCACGACTCTATGAATGCCACTTTCCGTGTGGCCAAAACGCAATCCTCGCAGTCCTGGTACCAGCCAGTACAGCAACAGCCAGCGGCGACTGGAACGTCGTCATCTTCGCACAACCACGACATGGCCCAACCAACCAACTTTAATGCGGCATTGGCTGCCGTCGATTGCTGCAACGTGGCCGTTGACAGCGAAGTGAAGTACTTGGATCTGGATGCCTGTAAGCGGGAACAGCTCAGCAACAGCAGTAATCTGCCCTCCGCCTCGGCTTCCGCATCCACCACATCTTCTTCGTTTGCCGGAGCAGCCACGGAGAGCAGCTTGGTGGGGGGTCTCAACATACGCACCGATGAGAAAATGCCCGCCAAGGGCGAAATCTCCGAGCAGGAAAGCAACTGCGACATTGAGAACTCCTGGAGTCAATCGATGTATGGCGACATATCACAGCGGTACTTTAGAAACCAGTTTTCAGGCGGCTACAATCCCGACTGGCGGCAGGACTACTATCCGGCTCAGGATCTCAGTGCCCAGCAGCGGGAGCTCAAACGCTTCGACTTCACTGCGGTCGACGAGGAGGCATCCTGTAGCTCTAAAAAAAGCCATTTACTGGATGGCGTAGATACACCCACTGTTTTTTCATCCTCATCGGCTTTGCTGGCTGGTCCACCAATAGCCTCCACATCCAGGGCAGCCGCTGAGGCGGCGGCGGTAGCCGCAGCAGCGGCTGCGGCTCAGCGGAAGCCGCCGCGTCGCAAGATTTATAAATGTCCGCACTGCGAGGCAATTTTCGAAAAGCTCAAGGATCGCAATGCGCATATGATTGGCGAGCACAATTATGTGCGCCAAAATCGCCGCTTAATTTGCACTCAGCCGCTGGACAACTCATCGATGTTACcgccacagcagcagcaccagccaCTATTGCCGCTCCAAGTGGACCCCAGCACTATCGGCGGAATCATCCAAGAGGATTCTAAGGACGGCATTGTCAAGATCAAGCAAGAACAGTGCCCGGATAAGCATGAGTCAGAGGAACAAATTCATACTCACGCCGAACTGACGGATATCAAGACTGCCGTGCTGCTGGGAGATGATGACATAAAGCCACCCAGTGTGGCCCAACTAGACGAGAAGCCTACCATAGTGCCGCTGGCCATGACCACGCCCGCTGCCAAGCTGGAAGCGCTTTATCGCATGTTAATTGCCTACAACGAATCGAAACTGGGCCAGGAACGCAACAACATCAGTGAGCTGGAGCAGAAGGCCATGGAGAAGTCGATCTTTCTCTGTTACGTTTGTCGCACAGATTTTCCCTCTGTGAAGCTCTACGATGCGCATCTCACGGAACATCCCGCCGAGTGTTTCACCTGTGGCAAGAAATTTTATCGCTGGAAGAACTTCTCGCTGCATTTGAAGCGTCATCTGGGATGGAAGGAGTTCGGCTGCTGTGTGTGTGACAAGAAGTTTGTGGTTCGAAGCGCTCTTGTGGAGCACATGCGCATGCATACCGGCCAAACGCCGCTCAAGTGTAAGATATGCGGCAAAAAATTTAAGCGTTACTCCAACTTGACGCAACATCGCAAACGGCACACCAAAATGATGGTTCGCAAAAAGGAATATGTGTGCCATTGCGGCGAGGTGCTGCCGTCAAAGGCCCGCTTCCTGTGGCACAAGGAGACTCACGATCTGAAGCCCAAATGTTGTCCCTACTGCTGCGATAGGTTCGTGCATGCCAACTCTCTGCGCCGACATATACGACTGGCCCACTCGGACAAGTTCGACTATGCCGAGCCCATGGAGTGTCCCATGTGTAAGCAGATCTTTGCCAAGACATCCATCAAGGCGCACATGGCCACGCACTCAACGGATCCGCAGTACGACTGCGCCATTTGCAATAAGAGCTTCTCCACCAAATGGAATCTCAAGATACACTCGTGGGTGCACGCCAACCGTACCGCCAAACCTTTCAAGTGCGAGTACTGCCCCAAGGCGTTTGTGCGCGAGCTGGACTTTAAAAATCACATCAATGCGCACAAGCAGATCAAGCCGTACACCTGCGAGTACTGTGGCTGCAAGTTCATACGCAAGTACAACTACATGCGGCATCGGCGCGAGCACCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAGTCCTTCCATCGACACTACTATCTCATCGAGCACCGGCGCATCCACACCGGCGAGCGGCCCTTCCACTGCACCATCTGCGGCAAGAGCTCCACCACTAAAACCAATCACAATAAGCATCTAAAGATTCATCACTCTCGCGACCCCTTCACCGTGGAGGTCTAA
Protein Sequence: MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTISGNSGMGSALAAAMLSGGGSGVNIDNKTGSSTSTADVKPAIEETSTAKATPSPASLPPPPLSSSTPSSASSNSKLNNPPTKALKSATPTTEAPANPSAPTTSSVTAVYQPSLATSDYRYDQQSAQQQQQHGFSRTATATLVIPQVPQQHFLASQQQQHALFAHQQQSGLKYTYATTLPPPPPLQLFAQQQQSATQSPSHQKPPPAYGAAISQIRSQHNQNKQQQHQHLTLHHNLALAPPTTAAGKPSKVHSEVFLNPPPPPPPPPPATQSQPHHQQQVALSSSSTRLQIQPSIPLQTYSSIGNICSSTTSTAVAGRASRQTNSPFGALLNAAAAAACASPSSASSVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDENEDENDDDDEEEDEDEAEQDEPSDHVEDGDDEQEDNSRSRCRSRNAPKTIKKSRKSKPKRTSKQPTSDEEEFMSISSSVESESEGDERDEKVKQFEVPPPPLCTAPSTSSAAAAAASTTSSTSGDGNSNSNSISTATKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDDYDNVTQTECTPPVEQKPTLGTTSVIRMASTSITAPEDLTQTPAMKIEVEVESTTLLPQRFSAPAQQRGPKKLVIKPKATATTTTQKTDTPSSGSSEQLLFSSISDGNPVTAPTSEMVQIKSEKLDTPTTGSILEKHLTTRQLHSTINDDDARVLLDFANSKQPPPLAGGASNTTFVVGAAAPTCFPSAGSVFASSTTTMQKACKPGEEYILPDNNLEADEIVISSSSFASSSQRHAQAQADLASTSVQPNTAGASFNEFNFLYHQSTTTTTTTSAVGAYFSPFARQQQQHHTQHGASEATNAATLASSSSNSSAMDHDSMNATFRVAKTQSSQSWYQPVQQQPAATGTSSSSHNHDMAQPTNFNAALAAVDCCNVAVDSEVKYLDLDACKREQLSNSSNLPSASASASTTSSSFAGAATESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSGGYNPDWRQDYYPAQDLSAQQRELKRFDFTAVDEEASCSSKKSHLLDGVDTPTVFSSSSALLAGPPIASTSRAAAEAAAVAAAAAAAQRKPPRRKIYKCPHCEAIFEKLKDRNAHMIGEHNYVRQNRRLICTQPLDNSSMLPPQQQHQPLLPLQVDPSTIGGIIQEDSKDGIVKIKQEQCPDKHESEEQIHTHAELTDIKTAVLLGDDDIKPPSVAQLDEKPTIVPLAMTTPAAKLEALYRMLIAYNESKLGQERNNISELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00915626;
90% Identity: iTF_00917656;
80% Identity: -