Basic Information

Insect: Lordiphosa stackelbergi
Gene Symbol: -
Assembly: GCA_018904235.1
Location: JAEIFU010000072.1:118037-127611[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.012 0.54 10.6 0.3 1 23 1207 1230 1207 1230 0.95

2 12 0.00022 0.0097 16.1 2.7 2 23 1406 1427 1406 1427 0.97

3 12 0.00014 0.0063 16.7 0.9 3 23 1435 1455 1433 1455 0.98

4 12 7.2e-07 3.1e-05 24.0 4.1 2 23 1462 1483 1461 1483 0.97

5 12 6.8 3e+02 2.0 0.4 5 23 1496 1514 1494 1514 0.96

6 12 1.7 73 3.9 5.4 3 23 1521 1542 1519 1542 0.93

7 12 0.18 7.8 7.0 0.2 2 23 1553 1573 1552 1573 0.96

8 12 6.9e-05 0.003 17.7 0.4 1 19 1579 1597 1579 1601 0.95

9 12 4.3e-05 0.0019 18.4 0.4 1 23 1609 1631 1609 1631 0.98

10 12 0.00013 0.0056 16.9 7.6 1 23 1637 1659 1637 1660 0.96

11 12 0.00025 0.011 16.0 5.9 1 23 1665 1687 1665 1687 0.98

12 12 0.036 1.5 9.2 8.2 1 23 1693 1715 1693 1716 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.012	0.54	10.6	0.3	1	23	1207	1230	1207	1230	0.95
2	12	0.00022	0.0097	16.1	2.7	2	23	1406	1427	1406	1427	0.97
3	12	0.00014	0.0063	16.7	0.9	3	23	1435	1455	1433	1455	0.98
4	12	7.2e-07	3.1e-05	24.0	4.1	2	23	1462	1483	1461	1483	0.97
5	12	6.8	3e+02	2.0	0.4	5	23	1496	1514	1494	1514	0.96
6	12	1.7	73	3.9	5.4	3	23	1521	1542	1519	1542	0.93
7	12	0.18	7.8	7.0	0.2	2	23	1553	1573	1552	1573	0.96
8	12	6.9e-05	0.003	17.7	0.4	1	19	1579	1597	1579	1601	0.95
9	12	4.3e-05	0.0019	18.4	0.4	1	23	1609	1631	1609	1631	0.98
10	12	0.00013	0.0056	16.9	7.6	1	23	1637	1659	1637	1660	0.96
11	12	0.00025	0.011	16.0	5.9	1	23	1665	1687	1665	1687	0.98
12	12	0.036	1.5	9.2	8.2	1	23	1693	1715	1693	1716	0.95

Sequence Information

Coding Sequence: ATGGTCGAAAGCGTGCAGTGCCCCGTGTGCACTTTGTACTTGCATGCGGGCATGAATCTGTCCGATCACTTGGAGACGCACCCCAAAGAGCAGGTCATAAAAGCACTGGTCCAAATGACAATCAGTGGCAATAGTGGCATGGGGAGTGCCTTGGCGGCCGCCATGCTGACTGGTGGGGGCAGTGGTGTTAACATAGATACCGGCGACTCCACATCAGCGGCTGATGTAAAACCAGCAATAGAGGAAACCTCTACATCAAAGGCAACGCCAGCGCCGGCCTCCCTGCCACCGCCACCGCTATCCTCCTCCGCTCCCTCCTCTGCCAGTAGCAACAGCAAATTAAATAATCCACCGAATAAGGCACTGAAAAGCGCAACGCCCACGACTGAGGCGCCAGCCAACCCATCCGCACCCACCACAAGCAGCGTAACCGCTGTGTATCAGCCATCCTTGTCCACATCCGACTATCGCTACGACCAGCAATCGGCACAGCAGCAACAGCAACACGGGTTCTCGCGTACTGCCACCGCCACCTTGGTGATACCACAGGTGCCGCAGCAGCATTTCCTAGCCAGTCAGCAACAGCAACATGCTCTGTTTGCACACCAACAGCAGTCTGGACTGAAATATACCTACGCCACCACGCTGCCGCCTCCACCACCATTGCAGCTCTTCGCACAGCAACAGCAATCGGCCACGCAGTCCCCGTCCCATCAAAAGCCGCCACCCGCGTATGGAGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAACAAACAGCAGCAACACCAACAACTAACCTTGCACCATAACTTGGCCCTGGCACCACCGACAACAGCTGCTGGAAAACCCAGCAAAGTCCATTCGGAAGTATTTTTGAATCCCCCACCACCGCCACCGCCGCCACCACCGGCAACGCAGTCGCAACTGCACCACCAACATCAAGTGGCTTTAACAACATCCTCCACAAGACTGCAGGTACAGCCATCAATTCCACTCCAAACGTACTCCTCAATTGGAAACATTTGCTCCTCAACCACATCAACGGCTGCTGCTGGTCGAGCCAGTCGTCAAACCAATTCACCCTTTGGAGCACTGCTTAATGCAGCGGCAGCTGCTGCCTGCGCCTCACCTTCATCGGCCTCGTCAGTGCTGCGCTTTGCCGAATCGCCAGTGGCCCACTACCTGGAGCGTGAGAATGGCGATTTCATTGTCCAGGAGACGCCTAAGCATATTGTGGAGTGCGTGGAAAAGGAAGATGGCGAATTCTCCGTGATTGAACGCATTTATCAGTCGCCGCCGAGTGTACTCCATATACACGATGAGAACGAGGATGAGAACGACGACGAAGACGAAGAAGAAGACGAGGATGAAGCGGAGCAGGATGAGCCGTCCGATCATGTGGAGGATGGCGATGATGAGCAAGAGGACAACAGCCGAAGCCGCTGCCGCAGCCGGAATGCTCCGAAAAACATAAAGAAGTCTCGCAAGTCAAAGCCCAAGCGAACATCCAAACAACCTACATCGGATGAGGAGGAATTCATGAGCATAAGCAGCAGCGTAGACAGTGAATCAGAAGGCGACGAGCGAGATGAAAAGGTTAAACAGTTTGAGGTGCCACCACCACCGCTCTGCACGGCTCCATCCACCAGCAATGCGGCTGCCGCTGCAGCCTCAGCCACCTCATCCACCTCAGGCGATGGCAATTCCAACTCCAATTCCACTTCCACTGCCACCAAGTCCAAGAAGAATCGAATTACCGTGCTCAGTGATGTTCCGCTGAATATGAATGAGTATTTAGATCTAATGGGCAACATTGTCGCCTCCAGTCGGATTGGGGCGGCACGTCCCTTTGCCGCTGTGGCACCCATTCCACTGGTCAAAGTGGAAAAGGAAGAGCCACTGGATGACTATGACAACGTCACGCAAACTGAGTGCACGCCTCCAGTGGAGCAGAAGCCCACCTTGGGCACCACCAGCGTCATACGAATGGCCAGCACCAGCATCACAGCTCCCGAGGATCTCACCCAGGCACCGGCAATGAAAATCGAGGTGGACGTTGAGAGCACGACCCTGTTGCCTCAACGGTTCTCGGCCCCGGCCCAGCAGCGTGGGCCCAAGAAATTAGTCATCAAACCAAAGGCCACGGCCACGACGACAACACAAAAGACTGACACCCCATCTTCCGGCAGTTCCGAGCAGCTGCTGCTTTCCTCCATATCAAATGGAACCCCCGTTACGGCTCCCACCTCAGAGATGGTCCAGATCAAGAGCGAGAAGTTGGATGTGCCCACAACAGGCAGCATCCTGGAGAAGCATCTGACCACTCGTCAACTCCACTCGACCATCAACGATGACGATGCTCGTGTGCTACTAGATTTTGCCAACTCCAAGCAGCCGCCGCCACCAGCCGGCGGCGCCTCCAACACCACATTCGTGGTGGGTGCTGCCGCCCCAACCTGTTTCCCCTCGGCTGGCTCCGTTTTTGCCAGCAGCACAACAACTATGCAGAAAGCGTGCAAGCCGGGCGAGGAATACATTCTGCCCGATAATAATCTGGAGGCGGATGAAATTGTGATATCCTCGTCTTCCTTCGCTTCAACCTCACAGAGGCATGCGCAGGCGCAGCCTGATCTGGCCCCCACATCAGGGCAGCCGAACACAGCAGGCGCTTCTTTCAATGAATTCAATTTTCTTTACCATCAATCCACAACGACAACAACGACTACTTCGGCGGTTGGTGCCTACTTCTCACCTTTTGCCAGGCAGCAGCAGCAGCAGCACACACAGCATGGAGCCAGCGAGGCCACCAATGCCGCCACACTGGCCTCCTCCTCCAGCAACTCGTCGGCCATGGATCACGACTCTATGAATGCTACTTTCCGTGTGGCCAAAACGCAATCCTCGCAGTCCTGGTACCAGCCAGTACAGCCAGCAACAGCAACGACTGGAGCGTCGTCATCCTCGCACAACCACGACATGGCCCAACCAACCAACTTCAATGCGGCCTTGGCTGCCGTTGACTGCTGCAACGTGGCCGTTGACAGCGAAGTCAAGTACTTGGATCTGGATGCCTGCAAGCGGGAACAGCTCAGCAACAGCAGTAATCTGCCCTCCGCCTCGGCTTCCGCATCCACCACATCTTCTTCATTTGCCGGAGCTGCCACGGAGAGCAGCTTGGTGGGGGGTCTCAACATACGCACCGATGAGAAAATGCCCGCCAAGGGCGAAATCTCCGAGCAGGAAAGCAACTGCGACATTGAGAACTCCTGGAGTCAGTCGATGTATGGCGACATATCACAGCGGTACTTTAGAAACCAGTTTTCAGGCGGCTACAATCCCGACTGGCGGCAGGACTACTATCCGGCTCAGGATCTCAGTGCCCAGCAGCGCGAGCTTAAACGCTTCGACTTCACAGCGGTCGACGAGGAGGCTTCCTGTAGCTCCAAAAAAAGCCATTTGCTAGATGGCGTAGACACACCCACTGTTTTTTCATCCTCATCGGCTTTGCTGGCTGGTCCACCAATAGCCTCCACATCCAGGGCAGCCGCCGAGGCGGCGGCGGTGGCTGCAGCAGCGGCTGCGGCGCAGCGTAAGCCGCCGCGTCGCAAGATTTATAAATGTCCGCACTGCGAGGCAATTTTCGAGAAGCTCAAGGATCGCAATGCGCACATGATTGGCGAGCACAATTATGTGCGCCAGAATCGCCGCCTAATATGCACTCAGCCGCTGGACAACTCATCGATGTTACCGCCACAGCAGCAGCAGCAGCCACTGTTGCCGCTCCAAGTGGACCCCAGCACCGTCAGCGGAATCATGCAAGAGGATTCTAAGGACGGCATTGTTAAGATCAAGCAAGAACAGTGCCCGGATAAGAATGAGTCAGAAGAACAACTTCATACTCATGCCGAACTGACGGATATCAAGACTGCCGAGCTGCTAGGCGATGGTGACATAAAGCCACCCAATGTGGCTCAACTAGACGAGAAGCCGGCCATTGTGCCGCTGGCTATGACCACGCCCGCTGCCAAGCTGGAAGCGCTTTATCGCATGTTAATTGCCTACAACGAATCGAAACTGGGCCAGGAACGCAACAACATCAGTGAGTTGGAGCAGAAGGCCATGGAGAAGTCGATATTTCTCTGTTACGTTTGTCGCACCGATTTTCCCTCTGTGAAGCTCTACGATGCGCATCTCACGGAACATCCCGCCGAGTGTTTCACCTGTGGCAAGAAATTTTATCGCTGGAAGAACTTCTCGCTGCATTTGAAGCGTCATCTGGGCTGGAAAGAGTTCGGCTGCTGTGTGTGTGACAAGAAGTTTGTGGTGCGAAGCGCTCTTGTGGAGCACATGCGCATGCATACCGGCCAAACGCCGCTCAAGTGCAAGATATGCGGCAAAAAATTCAAGCGTTACTCCAACTTGACGCAGCATCGGAAGCGGCACACCAAAATGATGGTTCGCAAAAAGGAATATGTGTGCCATTGCGGAGAGGTGCTGCCGTCAAAGGCCCGCTTCCTGTGGCACAAGGAGACCCACGATCTGAAGCCCAAGTGTTGTCCCTACTGCTGCGACAGGTTCGTGCATGCCAACTCTCTGCGCCGACATATACGACTGGCCCACTCGGACAAGTTCGACTATGCCGAGCCCATGGAGTGTCCCATGTGTAAGCAAATTTTTGCGAAGACATCCATCAAGGCGCACATGGCCACGCACTCGACGGATCCGCAGTACGACTGCGCCATTTGCAATAAGAGCTTCTCCACCAAATGGAATCTCAAGATACACTCGTGGGTGCACGCCAACCGTACCGCTAAGCCCTTCAAGTGCGAGTACTGCCCCAAGGCGTTTGTGCGCGAGCTGGACTTTAAGAATCACATCAATGCGCACAAGCAGATCAAGCCGTACACCTGCGAGTACTGTGGCTGCAAGTTCATACGCAAGTACAACTACATGCGGCATCGGCGCGAGCACCATGGCAATAAGAAGTTCACCTGCGATCAGTGCGATAAGTCCTTCCATCGGCACTACTATCTCATCGAGCACCGGCGCATCCACACCGGCGAGCGGCCCTTTCACTGCACCATCTGCGGCAAGAGCTCCACCACCAAAACCAATCACAACAAGCATCTAAAGATTCATCACTCTCGCGACCCCTTTACCGTGGAGGTCTAA
Protein Sequence: MVESVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTISGNSGMGSALAAAMLTGGGSGVNIDTGDSTSAADVKPAIEETSTSKATPAPASLPPPPLSSSAPSSASSNSKLNNPPNKALKSATPTTEAPANPSAPTTSSVTAVYQPSLSTSDYRYDQQSAQQQQQHGFSRTATATLVIPQVPQQHFLASQQQQHALFAHQQQSGLKYTYATTLPPPPPLQLFAQQQQSATQSPSHQKPPPAYGAAISQIRSQHNQNKQQQHQQLTLHHNLALAPPTTAAGKPSKVHSEVFLNPPPPPPPPPPATQSQLHHQHQVALTTSSTRLQVQPSIPLQTYSSIGNICSSTTSTAAAGRASRQTNSPFGALLNAAAAAACASPSSASSVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDENEDENDDEDEEEDEDEAEQDEPSDHVEDGDDEQEDNSRSRCRSRNAPKNIKKSRKSKPKRTSKQPTSDEEEFMSISSSVDSESEGDERDEKVKQFEVPPPPLCTAPSTSNAAAAAASATSSTSGDGNSNSNSTSTATKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDDYDNVTQTECTPPVEQKPTLGTTSVIRMASTSITAPEDLTQAPAMKIEVDVESTTLLPQRFSAPAQQRGPKKLVIKPKATATTTTQKTDTPSSGSSEQLLLSSISNGTPVTAPTSEMVQIKSEKLDVPTTGSILEKHLTTRQLHSTINDDDARVLLDFANSKQPPPPAGGASNTTFVVGAAAPTCFPSAGSVFASSTTTMQKACKPGEEYILPDNNLEADEIVISSSSFASTSQRHAQAQPDLAPTSGQPNTAGASFNEFNFLYHQSTTTTTTTSAVGAYFSPFARQQQQQHTQHGASEATNAATLASSSSNSSAMDHDSMNATFRVAKTQSSQSWYQPVQPATATTGASSSSHNHDMAQPTNFNAALAAVDCCNVAVDSEVKYLDLDACKREQLSNSSNLPSASASASTTSSSFAGAATESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSGGYNPDWRQDYYPAQDLSAQQRELKRFDFTAVDEEASCSSKKSHLLDGVDTPTVFSSSSALLAGPPIASTSRAAAEAAAVAAAAAAAQRKPPRRKIYKCPHCEAIFEKLKDRNAHMIGEHNYVRQNRRLICTQPLDNSSMLPPQQQQQPLLPLQVDPSTVSGIMQEDSKDGIVKIKQEQCPDKNESEEQLHTHAELTDIKTAELLGDGDIKPPNVAQLDEKPAIVPLAMTTPAAKLEALYRMLIAYNESKLGQERNNISELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00915626;
90% Identity: iTF_00917656;
80% Identity: -