Lclr014184.1
Basic Information
- Insect
- Lordiphosa clarofinis
- Gene Symbol
- sip1
- Assembly
- GCA_018904275.1
- Location
- JAEIGQ010000256.1:36720-39339[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-95 7.2e-91 304.7 12.9 3 275 408 677 406 677 0.97 2 2 0.03 2.9e+02 1.0 0.1 156 203 688 732 681 733 0.77
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAGCGCTTCGAAATCACCGACTATGACCTGGACAATGAATTCAATATCAACAGACCGCGGGGCAGGCAGAGCAAGCACCAGCAAATCTATGGAATTTGGGCGGATGACAGCGACGAGGAGAGCGGTGGAGAGGCAAGCAAACGCAAAGGACGTGCCACTCGTCAGCCCAAGGATTATACATTGCCTGTGAACTTTGTGGCCGGGGGCATCCAACAGGCGGGCAAGAAAAAGCCAAAGAACAAAGAGGAAGGAGATCAAGAGGAGGCCCAATATAGCGACGAGTCTGAGGAGAATGCACGTCCAGCTTTCGGTGAGCTTTCCGATAATTCTGCCAATTCCACTTCGGAGGAGGAGCAGGAGCAAAAACCCTCCCTGGGCAGAACGAAGGCCCAAGCCGGCTTCAAGCATCAATCGCATATACCCAGCGAACGTCATGTGGGTGCCTGGGAGCAGCATACCAGAGGCATAGGAGCCAAATTGTTGCTACAGATGGGCTACGAGCCAGGCAAGGGATTGGGCAAGGATTTGCAGGGCATCTCTCAGCCGGTGCAGGCACATGTGCGCAAAGGACGTGGAGCCATAGGAGCCTATGGTCCCGAAACAGCAGCCAGCATACCAGGCAAACCCAAACCCAGCATAAAAATGGATGAAGATCTGCAGGAGGCCAAGGAATTTAAAGAGCAAATGAACAAATGGCGAAAGGGAGGTGTAGGAGCTGCAGCAGAAGTCCCGGAGAAACAGGGCAAACGATACTATTACAAATCCGTGGAGGAAGTCATAGCCAAAGGCAAAAAATCCCAACACTTGCTATCCGAAAAGTTGAGCCAAAAACTGGGCAACGTGCCGGTAATTGATATGACGGGGCCGGAGAAAAGAGTTTTAAGTGGTTACCATGCCTTGGGCCAGACCAAAATATCAACGGATGAGCTGGAGGATAGGTCAGCAGGAGCAGCCAGTGCTCCCTGTGTCTTTGCCTTGCCCGAATTGACGCACAATCTGCAGCTTTTGGTCAGTCAATGTGAACAGCAAATCATTTCCATAGACAAATCCGAAAGAGAATCCTCCAGCCAGCAGCAGCAACTGGAATTTGAGTATAAGAAACTAGATGAACTGGTCCAGCTGGAAAGGAATCACATTAAAACGCTGGAAGAGGCCTTGGAGCGCGTGGAGAAACTCAGTGAGGACCCCGATTTAAGTCTGACGAAGGCGGAGCATTTATTCCTCGAGCTGCAGCATGATTATGCTTCGGAATTCCAGGAATTTGGCTTGGCAGATTTAGCTGCAGGTGTGATAGCGCCGCTGGTCAAGCGAGATCTGTCCTCGTGGTCGCCCCTAGAGCAGCCCACCCAACCCTTGGCGCTAATCAAGAAATGGCGTGGATTTCTGCAAAAGACAGATGAATCTTCTGCAGAGCAGCAAACTCGTAATGTGTTCGATCCCTATTCCTCGCTTATCTGGGCGGGTGTTATGCCCTCATTTCGTTCATGCGCCTCCTCCTGGTCACCCAAAGAACATGCACCCATGGCAGCCCTGCTCGATGCTTGGGCTCCACTGTTGCCCACTTGGATTTTGGATTCGATATTGGAACAAATAATTTTGCCACGTTTGGCGGCTGGGGTTCTGGAATGGGATCCCTTGACCGATACTGTGCCCATACACAGCTGGATTTTGCCTTGGCATGGGATTTTGGGTCCGAAATTGGAGGAATCAATTTATCCCCAAATTCGTAGTAAACTGGGTGTGGCTCTGCAGGCCTGGTCACCGCAGGATCGTTCTGCCCGAGCCATGCTTACACCCTGGCAGCAAGCCTTTCCCGAGGAGGAATTGTTGGACTTTCTACTGCAGCATATCATACCCAAATTGCAGTTGGTACTCGGCGAATTCATTATTAATCCCCTGCATCAGGATCTAGAGCTGTGGAATCAGGTGTGGGAATGGCATGAATTGATACCACCCATGCATATGGCCATGTTGTTGGATAAGCATTTCTTTCCACGTTGGATGCAGGTTCTGGTCCTGTGGCTAAATCAATCACCCGACTATGCAGAAATCTCACGCTGGTATACCGGCTGGAAGAGCATGTTGAGTGAGCCTCTGTTACGTGAGCCCAGCATCAAAGAACACTTGCGTCGTGCTTTAGAAATGATGCATCGAGCCACAGATGCCATGCTACAACCCACATCGACTCCTCCGCCACCAGTTCCACCTGCTCCGGTCCTTCTGCCACCCGTTATGCTAGTGGATGTGGTTCAGCCAGCTCAACTAGAATTTAAGGAGTTGGTCTCACAGAAATGCGCCGAATTGGGCATTATATTTGCTCCTCTACCCGGACGACGGGAACTGGGCAAGCAGATTTATCGTGTGGGCAAGCTTTTTTGCTATATCGATCGCAATGTTTGCATGGTGAGCGATAGCAGCTTCAGCAACTGGCAACCGGTGGCCCTCAATCAACTGCTGGAACGCTCACAAACGGGAATCGTTTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRGRQSKHQQIYGIWADDSDEESGGEASKRKGRATRQPKDYTLPVNFVAGGIQQAGKKKPKNKEEGDQEEAQYSDESEENARPAFGELSDNSANSTSEEEQEQKPSLGRTKAQAGFKHQSHIPSERHVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIPGKPKPSIKMDEDLQEAKEFKEQMNKWRKGGVGAAAEVPEKQGKRYYYKSVEEVIAKGKKSQHLLSEKLSQKLGNVPVIDMTGPEKRVLSGYHALGQTKISTDELEDRSAGAASAPCVFALPELTHNLQLLVSQCEQQIISIDKSERESSSQQQQLEFEYKKLDELVQLERNHIKTLEEALERVEKLSEDPDLSLTKAEHLFLELQHDYASEFQEFGLADLAAGVIAPLVKRDLSSWSPLEQPTQPLALIKKWRGFLQKTDESSAEQQTRNVFDPYSSLIWAGVMPSFRSCASSWSPKEHAPMAALLDAWAPLLPTWILDSILEQIILPRLAAGVLEWDPLTDTVPIHSWILPWHGILGPKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWQQAFPEEELLDFLLQHIIPKLQLVLGEFIINPLHQDLELWNQVWEWHELIPPMHMAMLLDKHFFPRWMQVLVLWLNQSPDYAEISRWYTGWKSMLSEPLLREPSIKEHLRRALEMMHRATDAMLQPTSTPPPPVPPAPVLLPPVMLVDVVQPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMVSDSSFSNWQPVALNQLLERSQTGIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919049;
- 90% Identity
- iTF_00919049; iTF_00918123; iTF_00916228; iTF_00919812; iTF_00917203; iTF_00914496;
- 80% Identity
- -