Basic Information

Insect: Lithosia quadra
Gene Symbol: -
Assembly: GCA_963576445.1
Location: OY754882.1:14407299-14417986[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.4 1.6e+02 3.5 0.4 2 23 6 27 5 27 0.96

2 14 0.11 7.4 7.7 0.2 1 23 1001 1024 1001 1024 0.92

3 14 4.7 3.2e+02 2.6 0.1 1 23 1119 1141 1119 1141 0.95

4 14 0.00012 0.0081 17.0 2.0 2 23 1144 1165 1143 1165 0.96

5 14 0.00014 0.0093 16.9 3.1 1 23 1171 1193 1171 1193 0.98

6 14 0.0081 0.54 11.3 2.6 2 23 1200 1221 1199 1222 0.94

7 14 2.5 1.6e+02 3.5 2.0 5 23 1235 1253 1233 1253 0.96

8 14 0.0005 0.033 15.1 0.7 3 23 1260 1281 1259 1281 0.97

9 14 0.71 48 5.2 0.4 3 23 1301 1320 1300 1320 0.95

10 14 0.00042 0.028 15.3 0.5 1 20 1326 1345 1326 1348 0.91

11 14 0.018 1.2 10.2 0.3 1 23 1356 1378 1356 1378 0.98

12 14 0.0063 0.42 11.7 7.2 1 23 1384 1406 1384 1406 0.98

13 14 6.9e-06 0.00047 21.0 1.4 1 23 1412 1436 1412 1436 0.97

14 14 0.0011 0.077 14.0 5.1 1 23 1442 1464 1442 1465 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.4	1.6e+02	3.5	0.4	2	23	6	27	5	27	0.96
2	14	0.11	7.4	7.7	0.2	1	23	1001	1024	1001	1024	0.92
3	14	4.7	3.2e+02	2.6	0.1	1	23	1119	1141	1119	1141	0.95
4	14	0.00012	0.0081	17.0	2.0	2	23	1144	1165	1143	1165	0.96
5	14	0.00014	0.0093	16.9	3.1	1	23	1171	1193	1171	1193	0.98
6	14	0.0081	0.54	11.3	2.6	2	23	1200	1221	1199	1222	0.94
7	14	2.5	1.6e+02	3.5	2.0	5	23	1235	1253	1233	1253	0.96
8	14	0.0005	0.033	15.1	0.7	3	23	1260	1281	1259	1281	0.97
9	14	0.71	48	5.2	0.4	3	23	1301	1320	1300	1320	0.95
10	14	0.00042	0.028	15.3	0.5	1	20	1326	1345	1326	1348	0.91
11	14	0.018	1.2	10.2	0.3	1	23	1356	1378	1356	1378	0.98
12	14	0.0063	0.42	11.7	7.2	1	23	1384	1406	1384	1406	0.98
13	14	6.9e-06	0.00047	21.0	1.4	1	23	1412	1436	1412	1436	0.97
14	14	0.0011	0.077	14.0	5.1	1	23	1442	1464	1442	1465	0.95

Sequence Information

Coding Sequence: ATGGATCCGCTCGTGCAGTGTCCTGTATGCACGCTTTTCCTCCACAATGGAATGACCCTGGAGTCACATTTGGACACACATCCTAAAGACCAGGTCATAAAAGCATTGTGTAATCTGACAACCAAGGCTCCCAGCTATGGGAGCAGAACTACCACTCCGTTACATTCAGAACGGTCATACAGAAGTAGGTCACGGACACCTGCAACTGAAGATACTAGATGGAATGGCTCCCATAGAAGTGATGACCGCTACTGGCGGAGAACACCTAGTAGGACTCCTAAGGGCAATTCTATGTCAAGTTCAGCAAGAAATGGAGCACCTGATGTGCGAATGAGTGATAtgaattttgaaaacaattGTAGTTCTGTTAATACAGGTCAAATTTCAAGTTCTCCATTTATAATGAAGGCTGACAAAATCCAGCAGACATACCAATCTCCTCCCATGTCAGAATTTGACCCACAGTACATTTACTATGACCAGCAAGAGGacagagaaataaaatattcccgTAGTGCTGAATACAATTCAATGAGTAGTCCTAATAACTTGTTTGCTTACAACAACATGGTGCCAGCTGTGGGTCCAGGAGTTAAATTGGTACCAGCCATGCCTAAAAGGGGCAATGaccttacaaaaatattacctaaaccAAATAACATACTCCTTAAAAATATGGGTGGTGTGCAATATGTCAGTCCAGGAACCAAGCCAATGCATATGGTGGTGCCTAGTGCATCTGCAATTGTCCAGAAAAGTGTACAAAACAATATGATTATGACAGGTAATGTGCCTAATCTACATATTCAAGTAGATGGTAAAACGGGGACACCACCTGTGACCAACAACCACATACACCAAATTACTTCTAGTGGTTTCACTCCAGGCACTACTGTTGTTACTCAGAATTCTCAAATCATCTACCGAGAAATGTTAAACAGTGGAGACGGTAAGCCTTTTATTACTAGTATGCCCACAGTGGTGAGTGCTCATGATAATGTCGCAAATTTAGCTCCAACCAGCTCATTGTACCAAAATGTAATGGTGGTTGATCAGTTTGGAAACACCTCATGTATGTATGCAACACCTCAACAGATAATGCCTAAATGCCCGACTACCATTTACAATGAAACACCAACTTTACCATCTAGCACTATGCATGGAACCAAATCGCCTCAAAGTGTAAATGACCCCAAAACACTAATAATTGAGGTTAGTCCCATTGCACCTTCAGTGTCAGAAAATGTGTGTGAATCTTCCAGCTCTGCTGGGTCACCACTAAACGTAAGTAGTCCAGTTGAGAAACCTGAGAAACAGATAAATGAGAATGTTGAATCAAGGAGTGAAGCGTTGGTTGTCACCAAAGGTCTAAAAATTCTTAGTAACATAAAAGTTGAAGTGCCAGTTCAGCATCACAAAAATATGGTAAACACTGTCATGGATCTCACAGGGCCTAATGATTCAGACTACCATGTGGAACTAGTGCCATCACCTGAAAAGATATTGCCTGACTTAGATGATAATGAAAATACAGCTATGATATCTGATGATTGCATACAACCATCAAACTCTAGCAACAATGGTGGCAACTCCACATTTGCTGTCATAAAGTGTAAGTCTTCCCCAGCTGAATTAGACAAAAGTAATGATAACAGCAAAATCGACACTGAGTTTTCTGACAGCTGTCCAGTTCCAGATTTAATTTGTAATGAGAAACCGTCTATATCACCTTGTAGTGAATTGTCAGAGAATGGTGAGAACTCAACCGATCGTACCTCAATATCTCCTAAACCTGCAATTAGTCAAGTTAGCCATAATAAAATAGACATTACAGAAAAGAAAATTCAACTTCCACAGAAGCCATTTAGGCAAAATTCATTAAGACTGAACAATATTTATGTGAAAAAGAACAAGAAAATTTTGCAGATAAAGAATGCAAAAAACTGTACTACAAGTAAATCTGCTAAAACTTTAGCAGCAGTAGCATCTTCATCTAACAACAAGGCTCCAGAAAATTTTACAATGAATAAATTGCATCAACCAGAGAAAAGTGATAACAAGGAAAAATCTAGTGTGTTGCAAACTATATCAGTGGAGGAGATCAAAGAAAATGATGATAACAATGAGTTTGATGCCGATACAGAGGAACAGTCGATGGATATTGAACCAGTGGCACCCTCTAGTATGAACAAACCACCGCAGTTCACTGCAACTGTAGAATTGCAATGCATACATGTCAAGGAGGAAATAAATTCGAGTAATGAAGGGGGATTTAGTAATCACACAGCTACATCGGACCGCGAACTTGCGCCAATGGAAACACTGCGTCCAATTAATGTTGTTTCCTATGCAAATATGTCGGGGGATTTTGAAGATGACTCAAATGACAGAGAGTTGCTCGACCTCGAAACAGCATCCAAGAACAAACAGTTTGTTAGTATGATGAATGAGAATTATTTTGGTGATAATATCTATGCGGACTACTTTACACCAGATCGTGTCGAGAGCTTCGAAGCAGAACGAGAGGCAGCAGGGTTCAAGGAGGGCCCGAAAGATGGTATGTATAACATTTGGGGTGAGCCATCTCAAAAGGACACTGAAAATGAGTTTGTTCTACCTAACTTTATACATGAGAGTTACAAAATAGCTGAGAGTAGTGGAATAGACTATTCTGAGCTTGGCACAGAGGAACAGGGTGACGTTGAAGGCGAGCCTGATAGCAAAGCGGATGTGCTGAGCGAAGGTCGTAGCGAGAGCGAAGCGCCGCTTAACATTTGCGCGGATGAGCGCATGCCGCCGCGGGGCGAACTTAGTGGTCAGGAGAGCAACGGAGATATGGAGTCACCTTGGGGAGggATGTATACGGACGTACCGCCGGCGGAGCCGTACGACTTGATGGCGAGAGAGAGCTGGGTCTCCGACGGTTCAGACATCGACGTTGGCGAGAAGAGGGAAACGCTAGTGGAAGAACTGCAGTTCACCAAGTCTTTGTCCCGCGTGTACACTTGCCGGTCTTGCGGGATGAAGGCGACGTCACTGAAAGAGCTGCGCGCACACAAGGCTTTGATCCACGCCATGCCCGCCCTCCCCACTTGTTCCGCGAGCACTCAAGAGCCAAAGCGGGTGGCCAAACACGCCCCCCACACGTACAGCCGCCTTGTCACCGACAGGAAGATTAAGAAGGAAGAGAAGTCAGCTGACGCTGAGATTCTGTCTAGCAATCTCTTAGCGATAGACAAGAAAGAACCTATCACACCAACAATTCTTCAAGTGTGCGACACGTTGGAGGAAGCCAAACCGAAGCTTGAAGGTTTGCTCAAGATCAAGCAAGAGACTAAGCGCAGACGAAAGGACTTCGTATGCGCTACGTGTAAAGTCGACCTGGGCAGTGACAAGGCATTCAACGCTCATCTCAAAATACACCCGCTGGAGTGTTTGACCTGCGGCAAATGTTTCTTTAGAAGAGCGAATATGGCGCTGCATATGAAGATGCATTTGGGGATCAAGAATTACAAATGCGAAGTGTGTGAGAAGCGGTTTATAACTCGACAGAAGTTGAAGGAGCACCACAACGTGCACACTGGGCGGCAACCCATCAAGTGCACCGTGTGCGACGACACCTTCCGGAGATACTCCAACATGGTGCAACATAGGGACCGGCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCATTGCGGCGGCGTGTTCCACTCGCGCGCCAAGCTGCTGTGGCACAAGGAGACGCACGAGGAGCGGCCCAAGGCGTGCCCCTACTGCAGCGACAAGTTCGTGCACGCCAGCAGCCTCACGCGCCACGTGCGGCGCGCGCACAACGCGTACTTCCTGCCGGAGCGCGCGCGCGGCCGGGCCCGCGGCGAGAACGTGTTCTGCCCCGTGTGCCGCGCCGTGTGCCTGCGGGCCAACCTGCGCGCGCACCTGGCCACGCACGGCGGCGCGCGGCCCTACGCGTGCGCCATGTGCAGCAAGGCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACCTGGCGCGCTCCGCCAAGCCCTACAAGTGCGCGCTGTGCGCCGGCGCCTTCGTGCGCCACTCGGAGTTCGTGTCGCACATGAACGCGCACCGCAGCGTGCGCCCCTACACGTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGGTGGCCAAGAAGTTCGTGTGCAAGGTGCCCGACTGCGGCAAGTCCTTCCACCGCAGCTACTACCTGTCCGAGCACATGAAGGTGCACAGCGGCGCGCGCCCCTTCTCCTGCAACATCTGCGGCAAGACCTCCAGCAACAAGTCCAACCACAACAAGCACGTGAAGATTCACCACGCGCGGGAACCTGTGGCCACCGAGGCGTAA
Protein Sequence: MDPLVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCNLTTKAPSYGSRTTTPLHSERSYRSRSRTPATEDTRWNGSHRSDDRYWRRTPSRTPKGNSMSSSARNGAPDVRMSDMNFENNCSSVNTGQISSSPFIMKADKIQQTYQSPPMSEFDPQYIYYDQQEDREIKYSRSAEYNSMSSPNNLFAYNNMVPAVGPGVKLVPAMPKRGNDLTKILPKPNNILLKNMGGVQYVSPGTKPMHMVVPSASAIVQKSVQNNMIMTGNVPNLHIQVDGKTGTPPVTNNHIHQITSSGFTPGTTVVTQNSQIIYREMLNSGDGKPFITSMPTVVSAHDNVANLAPTSSLYQNVMVVDQFGNTSCMYATPQQIMPKCPTTIYNETPTLPSSTMHGTKSPQSVNDPKTLIIEVSPIAPSVSENVCESSSSAGSPLNVSSPVEKPEKQINENVESRSEALVVTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGPNDSDYHVELVPSPEKILPDLDDNENTAMISDDCIQPSNSSNNGGNSTFAVIKCKSSPAELDKSNDNSKIDTEFSDSCPVPDLICNEKPSISPCSELSENGENSTDRTSISPKPAISQVSHNKIDITEKKIQLPQKPFRQNSLRLNNIYVKKNKKILQIKNAKNCTTSKSAKTLAAVASSSNNKAPENFTMNKLHQPEKSDNKEKSSVLQTISVEEIKENDDNNEFDADTEEQSMDIEPVAPSSMNKPPQFTATVELQCIHVKEEINSSNEGGFSNHTATSDRELAPMETLRPINVVSYANMSGDFEDDSNDRELLDLETASKNKQFVSMMNENYFGDNIYADYFTPDRVESFEAEREAAGFKEGPKDGMYNIWGEPSQKDTENEFVLPNFIHESYKIAESSGIDYSELGTEEQGDVEGEPDSKADVLSEGRSESEAPLNICADERMPPRGELSGQESNGDMESPWGGMYTDVPPAEPYDLMARESWVSDGSDIDVGEKRETLVEELQFTKSLSRVYTCRSCGMKATSLKELRAHKALIHAMPALPTCSASTQEPKRVAKHAPHTYSRLVTDRKIKKEEKSADAEILSSNLLAIDKKEPITPTILQVCDTLEEAKPKLEGLLKIKQETKRRRKDFVCATCKVDLGSDKAFNAHLKIHPLECLTCGKCFFRRANMALHMKMHLGIKNYKCEVCEKRFITRQKLKEHHNVHTGRQPIKCTVCDDTFRRYSNMVQHRDRHHLQKRAKVRDFVCHCGGVFHSRAKLLWHKETHEERPKACPYCSDKFVHASSLTRHVRRAHNAYFLPERARGRARGENVFCPVCRAVCLRANLRAHLATHGGARPYACAMCSKAFTTKWNLKLHRWTHLARSAKPYKCALCAGAFVRHSEFVSHMNAHRSVRPYTCNYCGCQFIRKYNCQRHVREHEVAKKFVCKVPDCGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00405318; iTF_00638059; iTF_00636846; iTF_01167026; iTF_00707244; iTF_01502383;
90% Identity: iTF_00405318;
80% Identity: -