Basic Information

Insect: Cybosia mesomella
Gene Symbol: -
Assembly: GCA_946251875.1
Location: CAMIUH010000167.1:509390-520077[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.3 4.6e+02 3.5 0.4 2 23 6 27 5 27 0.96

2 14 0.095 19 7.9 0.4 1 23 1002 1025 1002 1025 0.93

3 14 0.2 40 6.9 0.1 1 23 1120 1142 1120 1142 0.98

4 14 0.00028 0.056 15.8 1.6 2 23 1145 1166 1144 1166 0.96

5 14 0.0002 0.039 16.3 3.3 1 23 1172 1194 1172 1194 0.98

6 14 0.00021 0.041 16.3 2.5 2 23 1201 1222 1200 1223 0.94

7 14 0.94 1.9e+02 4.7 0.4 6 23 1237 1254 1234 1254 0.98

8 14 0.0039 0.77 12.3 3.7 3 23 1261 1282 1260 1282 0.97

9 14 0.046 9.2 8.9 0.6 2 23 1299 1319 1298 1319 0.96

10 14 4.8e-05 0.0095 18.3 0.8 1 20 1325 1344 1325 1347 0.92

11 14 0.0049 0.98 11.9 1.0 1 23 1355 1377 1355 1377 0.98

12 14 0.006 1.2 11.7 7.2 1 23 1383 1405 1383 1405 0.98

13 14 9.6e-06 0.0019 20.5 1.4 1 23 1411 1435 1411 1435 0.97

14 14 0.0011 0.22 14.0 5.1 1 23 1441 1463 1441 1464 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.3	4.6e+02	3.5	0.4	2	23	6	27	5	27	0.96
2	14	0.095	19	7.9	0.4	1	23	1002	1025	1002	1025	0.93
3	14	0.2	40	6.9	0.1	1	23	1120	1142	1120	1142	0.98
4	14	0.00028	0.056	15.8	1.6	2	23	1145	1166	1144	1166	0.96
5	14	0.0002	0.039	16.3	3.3	1	23	1172	1194	1172	1194	0.98
6	14	0.00021	0.041	16.3	2.5	2	23	1201	1222	1200	1223	0.94
7	14	0.94	1.9e+02	4.7	0.4	6	23	1237	1254	1234	1254	0.98
8	14	0.0039	0.77	12.3	3.7	3	23	1261	1282	1260	1282	0.97
9	14	0.046	9.2	8.9	0.6	2	23	1299	1319	1298	1319	0.96
10	14	4.8e-05	0.0095	18.3	0.8	1	20	1325	1344	1325	1347	0.92
11	14	0.0049	0.98	11.9	1.0	1	23	1355	1377	1355	1377	0.98
12	14	0.006	1.2	11.7	7.2	1	23	1383	1405	1383	1405	0.98
13	14	9.6e-06	0.0019	20.5	1.4	1	23	1411	1435	1411	1435	0.97
14	14	0.0011	0.22	14.0	5.1	1	23	1441	1463	1441	1464	0.95

Sequence Information

Coding Sequence: ATGGATCCGCTCGTGCAGTGTCCTGTGTGCACGCTTTTTCTCCATAATGGAATGACCCTGGAGTCACATTTGGACACACATCCCAAAGACCAGGTTATAAAAGCATTGTGTAATCTGACAACCAAGGCTCCCAGTTATGGAAGCAGAACTACCACTCCATTACATTCAGAACGGTCATACAGAAGTAGGTCACGGACACCTGCAACCGAAGATACTAGATGGAATGGATCCCATAGAAGTGAAGACCGCTACTGGCGGAGAACACCTAGTAGAACTCCTAAGGCCAATTCTATGTCAAGTTCAGTAAGAAATGGAGCACCTGATGTGCGAATGAGTGATATGAATTTTGAAAACAATTGTAGTCCTGTTAATACAGGTCCAATTTCAGGTGCTTCATTTGCAATGAAGGCTGATAAAATTCAGCAGACATACCAATCTCCTCCCATATCAGAATTTGACCCGCACTACATTTACTATGACCAACAAGAGGATAGAGAAATTAAATATTCCCGTAGCGCTGAATACAATTCAATGAGTAGTCCTAATAACATGTTTGCTTACAACAACATGGTACCGACTGTGGGTCCAGGAATTAAATTGGTAACAGCCATGCCTAAAAGGGGCAATGACCTCACAAAAATTTTACCTAAACCAAATAACATACTCCTTAAAAATGTGGGTGGTGTGCAATATGTCAGTCCAGGAACTAAGCCAATGCATATGGTGGTGCCTAGTGCATCTGCAATTGTCCAGAAAAGTGTACAAAACAATATGATTATGACAGGTAATGTGCCTAATCTACAAATTCAAGTAGACGGTAAAAAGGGAACACCACCAGTGTCCAAAAACCAGATACACCAAATTACTTCTAGTGGATTCACTCCAGGCACTACTGTTGTTACTCAGAATTCTCAATTCATTTACCGGGAAATGGTGAACAATGGCGACGGCAAGCCTTTTATTACTAGCATGCCCACAGTGGTGAGTGCTCATGATAATGTCACAAATTTAGCTCCAACCAGCTCATTGTACCAAAATGTAATGGTAGTTGATCAATTTGGAAACACCTCATGTATGTACGCAACACCTCAACAGATAATGCCTAAATGCCCAACTACCATTTACAATGAAACTCCAACTTTACCATCAAGCACTATGCATGAAAACAAATCCCCTCAAAGTGTAAGTGACCCCAAAACGCTTATAATTGAGGTTAGCCCCATTGCACCTTCAGTGTCAGAAAATATGTGTGAAACTTCCAGCCCTGCTGGGTCACCGTCTAATGCAAATGGTCCAGTTGAGAAATCTGAGAAACAGATAAATGAGAATGTTGAATCAAAGAGTGAAACATTGGGTGTTACTAAAGGTCTAAAAATTCTTAGTAACATAAAAGTTGAAGTGCCAGTTCAGCATCACAAAAATATGGTGAATACTGTCATGGATCTCACAGGGCCTAATGATTCAGACTACCATGTGGAACTGGTGCCATTACCTGAAAAGATATTGCCTGATTTGGATGGTAATGATAACACACACATGATATCTGATGATGGCATAAGACCATCAAACTCTAGCAGAGATGGTGTCAAGTCCACATTTGCTGTGATAAAGTGTAAGTCTTCCCCAACAGAATTAGACAAAAATATTGCTGATAACAAAATCGACACAGAGTTTTCTGACAGCTGTCCAGTTCCAGATTTAATATGTAATGAGAAACCGTCAATATCACCTTGTAGCGAATTGTCAGAGAGTGGTGATAACTCAACCGATCGTACCTCAATATCTCCTAAACCTGCAATTAGTCAAGTTAGCCATAATAAGATAGATATGACAGAAAAGAAAATTCATCTTCCACAGAAGCCATATAGGCAAAATCCATTAAGACTGAACAAtatttatgtgaaaaaaaataagaaaattttgcagataaaaaatgcaaaaaacagTACTGCAAGTAAATCTGCTAAAACACTAGCAACTATAGCATCTTCATCTAAAAACAAGGCTCCAGAAAATTTTACAATGAATAAATTGCATCAACCAGATAAAAGTGAGAACAAGGAAAAATCTAGTGTGTTACAAACTATATCAGTGGAGGAGATCAAagaaaatgatgataataatgagTTTGATGCTGATACAGAGGAACAGTCCATGGATATTGAACCAGGAGTAGCACCTTCTAGTATGAATGAACCGCCTCAGTTCACTGCAACTGTAGAGTTACAATGTATACATGTTAAGGAGGAAATAAATTCGAGTAATGAAGGGGGATTTAGTAATCACACAGCTACATCAGATCGTGAACTAGCACCAATGGAAACACTGCGTCCAATTAATGTCGTTTCCTATGCTAATATGTCAGGGGATTTTGAAGATGATTCAAATGACAGAGAGTTGCTCGACCTTGAAACAGCATCCAAGAACAAACAATTTGTCAGTATGATGAATGAGAATTATTTTGGTGATAATATCTATGCGGACTACTTTACACCAGACCGTGTCGAGACCTTCGAAGCAGAGCGAGAGGCAGCAGGGTTCAAGGAGGGACCTAAAGATGGTATGTATAACATTTGGGGTGAGCCATCACAAAAGGAGAATGGAAATGAGTTTGTTCTACCTAACTTTATACACGAGAGTTACAAAATAGCAGAGAGTAGTGGAATAGATTATTCTGACATCGGCACGGAGGAACAGGGTGATGTCGAAGGAGAGCCTGATAGCAAAGCGGATGTGTTGAGTGAAGGTCGTAGCGAGAGCGAAGCGCCGCTAAACATTTGCGCGGACGAGCGCATGCCGCCGCGGGGTGAACTTAGTGGTCAGGAGAGCAACGGAGATATGGAGTCGCCTTGGGGTGGGATGTATACGGACGTACCGGCGACGGAGCCGTACGACTTGATCGCGAGAGAGAGCTGGGTCTCGGACGGTTCGGACATCGACGTCGCCGAGAAGAGGGAAACGCTAGTGGAAGAACTTCAGTTTTCCAAGTCTTTGCCCCGCGTGTACACCTGCAGGTCTTGCGGGATGAAGGCGACGTCGTTGAAGGAGCTACGCGCGCACAAGTCCCTAGTACATGGCATGCCCGCGCTCCCCACTTGTTCCGCGACCTCGCACGTGCCGAAGCGAGTGACCAAACACGCCCCCCACACTTACAGCCGCCTCGTCACCGATAGGAAGATTAAGAAGGAAGAGAAGTCACCTGATGCTGAGATTCTGTCTAGCAATCTTCTAGCGATAGACAAGAAAGAACCTATCACACCAACAATTCTTCAAGTGTATGACACTTTGGAGGAAGCCAAACCGAAGATCGAAGGATTGATCAAGATCAAGCAAGAGACTAAGCGGAGACGAAAGGACTTCGTGTGCCCTACGTGTAAAGAGGATCTGGGCAGTGACAAGGCATTTAACGCTCATCTCAAAATACACCCACTGGAATGTTTGACCTGTGGGAAATGTTTCTTTAGAAGAGCGAATATAGCGCTGCATATGAAGATGCATTTAGGAATCAGAAATTTCAAATGCGAAGTGTGCGAGAAGCGGTTTATAACTCGGCAGAAGTTGAAGGAGCACCACAACGTGCATACTGGCCGGCAACCCATCAAGTGCACCGTTTGCGACGAGACCTTTCGGAGATACTCCAATATGGTGCAACATAGAGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCCGTGCGGCGCCGTGTTCCACTCGCGCGCCAAGCTGCTGTGGCACAAGGAGACGCACGACGACAAGCCCAAGGCCTGCCACTACTGCAGCGACAAGTTCGTGCACGCCAGCAGCCTCACGCGCCACGTGCGCCGCTCGCACAACGCCTACTTCCTGTCCGACCGGCTCAAGGCTAAGGGCGAGAACGTGTCCTGCCCCGTCTGCAAGCAGGTGTGCCTGCGCGCGAACTTACGCGCCCACCTCAGCACGCACAGCGGGGCGCGGCCCTACCCGTGCGTGGTGTGCAACAAGTCTTTCACCACCAAGTGGAACCtcaagctgcaccgctggacgCACATGTCCCGGTCCGCGAAGCCCTACAAGTGTACGCTATGCGCCAGCGCCTTCGTCCGCCACTCCGAATTCGTCTCCCACATGAATGCTCACAAGTGTGTTCGCCCCTACACCTGCAACTACTGCGGCTGCCAATTCATCCGAAAATACAATTGCCAGCGGCATGTCAGAGAACACGAGATGGCCAAAAAGTTCGTGTGCAAGGTCCCCGAGTGCGGTAAGTCCTTCCACCGGAGCTACTATTTGTCTGAACACATGAAGGTACACAGCGGTGCAAGACCTTTCTCCTGCAACATCTGCGGGAAGACCTCTAGCAACAAATCCAATCACAACAAACACGTCAAGATTCACCATGCGCGAGAACCTGTTGCCACCGAGGCGTAA
Protein Sequence: MDPLVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCNLTTKAPSYGSRTTTPLHSERSYRSRSRTPATEDTRWNGSHRSEDRYWRRTPSRTPKANSMSSSVRNGAPDVRMSDMNFENNCSPVNTGPISGASFAMKADKIQQTYQSPPISEFDPHYIYYDQQEDREIKYSRSAEYNSMSSPNNMFAYNNMVPTVGPGIKLVTAMPKRGNDLTKILPKPNNILLKNVGGVQYVSPGTKPMHMVVPSASAIVQKSVQNNMIMTGNVPNLQIQVDGKKGTPPVSKNQIHQITSSGFTPGTTVVTQNSQFIYREMVNNGDGKPFITSMPTVVSAHDNVTNLAPTSSLYQNVMVVDQFGNTSCMYATPQQIMPKCPTTIYNETPTLPSSTMHENKSPQSVSDPKTLIIEVSPIAPSVSENMCETSSPAGSPSNANGPVEKSEKQINENVESKSETLGVTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGPNDSDYHVELVPLPEKILPDLDGNDNTHMISDDGIRPSNSSRDGVKSTFAVIKCKSSPTELDKNIADNKIDTEFSDSCPVPDLICNEKPSISPCSELSESGDNSTDRTSISPKPAISQVSHNKIDMTEKKIHLPQKPYRQNPLRLNNIYVKKNKKILQIKNAKNSTASKSAKTLATIASSSKNKAPENFTMNKLHQPDKSENKEKSSVLQTISVEEIKENDDNNEFDADTEEQSMDIEPGVAPSSMNEPPQFTATVELQCIHVKEEINSSNEGGFSNHTATSDRELAPMETLRPINVVSYANMSGDFEDDSNDRELLDLETASKNKQFVSMMNENYFGDNIYADYFTPDRVETFEAEREAAGFKEGPKDGMYNIWGEPSQKENGNEFVLPNFIHESYKIAESSGIDYSDIGTEEQGDVEGEPDSKADVLSEGRSESEAPLNICADERMPPRGELSGQESNGDMESPWGGMYTDVPATEPYDLIARESWVSDGSDIDVAEKRETLVEELQFSKSLPRVYTCRSCGMKATSLKELRAHKSLVHGMPALPTCSATSHVPKRVTKHAPHTYSRLVTDRKIKKEEKSPDAEILSSNLLAIDKKEPITPTILQVYDTLEEAKPKIEGLIKIKQETKRRRKDFVCPTCKEDLGSDKAFNAHLKIHPLECLTCGKCFFRRANIALHMKMHLGIRNFKCEVCEKRFITRQKLKEHHNVHTGRQPIKCTVCDETFRRYSNMVQHRDRHHLQKRAKVRDFVCPCGAVFHSRAKLLWHKETHDDKPKACHYCSDKFVHASSLTRHVRRSHNAYFLSDRLKAKGENVSCPVCKQVCLRANLRAHLSTHSGARPYPCVVCNKSFTTKWNLKLHRWTHMSRSAKPYKCTLCASAFVRHSEFVSHMNAHKCVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00909172;
90% Identity: iTF_00909172;
80% Identity: -