Ecan032103.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421473.1:21600939-21610472[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.6 4e+02 3.5 0.4 2 23 6 27 5 27 0.96 2 13 0.045 7 9.0 0.4 1 23 1038 1061 1038 1061 0.92 3 13 0.00013 0.02 17.0 2.0 2 23 1180 1201 1179 1201 0.96 4 13 0.00015 0.023 16.8 3.1 1 23 1207 1229 1207 1229 0.98 5 13 0.0094 1.5 11.1 2.5 2 23 1236 1257 1235 1258 0.95 6 13 1 1.6e+02 4.7 0.4 6 23 1272 1289 1269 1289 0.98 7 13 0.0043 0.68 12.2 3.7 3 23 1296 1317 1295 1317 0.97 8 13 0.096 15 8.0 0.3 3 23 1335 1354 1334 1354 0.97 9 13 0.00025 0.04 16.1 0.5 1 20 1360 1379 1360 1382 0.91 10 13 0.0061 0.96 11.7 0.9 1 23 1390 1412 1390 1412 0.98 11 13 0.0067 1 11.6 7.2 1 23 1418 1440 1418 1440 0.98 12 13 1.1e-05 0.0017 20.4 1.4 1 23 1446 1470 1446 1470 0.97 13 13 0.0012 0.19 13.9 5.1 1 23 1476 1498 1476 1499 0.95
Sequence Information
- Coding Sequence
- ATGGATCCGCTCGTGCAGTGTCCTGTGTGcaccctctttctccataatGGAATGACCCTGGAATCACATTTGGATACACATCCCAAAGACCAAGTTATAAAAGCATTGTGTAATCTGACTACCAAGGCTCCCAGTTATGGAAGCAGGACTACCACTCCATTACATTCAGAACGGTCGTACAGAAGTAGGTCACGGACACCTGCACCTGAAGATACCAGATGGAATGGATCCCATAGAAGTGATGACCGTTACTGGCGGAGAACACCTAGTAGAACTCCTAAGACCAGTTCTATGTCGAGTTCAACAAGAAATGGAGCTACTGATGTGCGAATAAGTGATATGAATTTTGAAAACAATTGTAGTTCTGTTAGTACAGGTCAACTTTCAGGTGCTCCGTTTATAATGAAGGCTGATAAAATCCAGCAAACATACCAATCACCTCCCATATCAGAATTTGACCCACAGTACATTTACTATGACCAACAAGAGGACAGAGAAATTAAATATTCCCGTAGCGCAGAATACAATTCAATCAGTAGCCCTAATAATATGTTTACTTACAACAATGTGGTGCCCGCTGTGGGTCCAGGAGTTAAATTGGTACCAGCTGTGAATAAAAGGGGCAATGAGCTCACCAAAATATTACCTAAACCAAATAACATACTCCTTAAAAATATGGGTGGTGTGCAATATGTCAGTCCAGGAACTAAGCCAATGCATATGGTTGTGCCTAGTGCATCCACAATTGTccagaaaaatgtacaaaacaaTATGATTATGACAAGTAATATGCCTAATCTACAAATTCAAGTAGACAATAAAAGGGGAGCACCCCCTGTGACTACCAACCAGATGCACCATATTACTTCTAGTGGTTTCACGCCAGGCACTACTGTTGTTACTCAGAATTCTCAAATTATTTACCGGGAAATGGTGAACAATGTTGATGGTAAGCCTTATATTACTAGTATGCCCACAGTGGCGAGTGCTCATGACAATGTCACAAATTTAGCTCAAACCAGCTCATTGTACCAAAATGTAATGGTGGTTGATCAATTTGGAAACACCTCATGTATGTATACAACACCTCAACAGATAATGCCTAAATGCCCAACTACTATTTACAATGAAACTCTACCATCTAGGCAAACACCAACTTTACCACTTAGGCACACACCAACTTTGCCACTTAGGCATACGCCAACTTTACCATCTAGGCAAACTCCAACGTTGCCACTTAGACAAACTCCAACTTTACCTATGCATGAAAACAAGTCCTCTCAAAGTGCAAGTGATCCCAAAACGCTTATAATTGAGGTTGGCCCCATTGCACCTTCAGTGCCAGAAAATATGTGTGAATCTGCCAGCCCTGGTAGATCACCGTCAAACTCAAACAGTTCAGTTGAGAAGCCTGAGAGACAAATAACTGAGAATGTTGATTCTAAGAGTGAAACACAGGGTGTTACTAAAGGTCTGAAAATTCTTAGTAACATAAAAGTTGAAGTACCAGTTCAGCATCACAAAAATATGGTGAACACTGTCATGGATCTCACAGGGCCTAATGATTCAGATTACCATGTGGAACTGGTGCCATCACCTGAAAAGATATTGCCTGATTTAGATGATACTGATAATGATAATGTTAACATACACATAGTATCTGATGATAGCATACACCCATCAAACTCTAGTACAGATGATGCCAGCTCCACATTTACTGTGATAAAGTGTAAGTCTTCCCCGGAAGGATTAGACAAAAATATTGATGACAACAAAATAGATACTGAGTTTTCTGACAGCTGTCCAGTTCCAGATTTAATATGTAACGAGAAACCGTCAATATCACCCTGTAGTGAATTGTCAGAGAATGGTGATAACTCAACCGATCGTACCTCAATATCTCCTAAACCTGCAATTAGTCAAGTTAGccataataatatagatattacAGAAAAGAAAATTCTAGTTCCACAGAAGCCTTATAGGCACAATCCATTAAGACTGAACaatatttatgtgaaaaaaaacAAGAAGATTTTGCAGATAAAGAATGCAAAAACGAGTACTCCAAGCAAATCTACTAAAACATTAGCAACTGTGGCATCTTCATCTAACAAGGCTCCAGAAAATTTTACAATGAATAAATTGCATCAACCAGATAAAAGTGACAAGGAAAAATCTAGTGTGTTACAAACTATATCAGTGGAGGAGATCAAAGAGACtgatgataataatgagttTGATGCTGATACTGAGGAGCAGTCCATGGACATTGAACCCGTAGCACCTTCTAGTATGAATGAACCACCTCAGTTCACTGCAACTGTAGAGCTACAGTGTGTACATGTTAAGGAGGAAATAAACACAAGTAACGAAGGGGGATTTAGTAATCACACAGCAACATCAGACCGAGATCTTGCACCAATGGAAACACTACGTCCAATTAATGTTGTGTCCTATGCCAATATGGCAGGTGATTTCGAAGATGATTCAAATGACAGAGAGCTGCTTGACCTTGAAACGGCATCCAAGAATAAACAGTTTGTCAATATGATGAACGAGAATTATTTTGGTGATAATATCTACGCGGATTACTTTACACCGGATCGTGTCGAGACTTTCGAAGCGGAGAGAGAGGCAGCAGGGTACAAGGAGGGCACAAAAGATGGTATGTATAACATTTGGGGTGAGCCATCTCAGAAGGAGAATGAGAATGAGTTTGTTCTACCCAACTTTATACACGAGAGTTACAAAATAGCAGAGAGTAGTGGAATAGATTATTCTGAGATGGGTGCGGAAGAACAGGGTGATGTCGAAGGAGAGCCTGATAGCAAAGTGGATGTATTGAGCGAAGGTCGCAGCGAGAGCGAAGCGCCGCTGAACATTTGCGCGGACGAGCGCATGCCTCCGCGGGGAGAGCTCAGTGGCCAGGAGAGCAATGGAGATATGGAGTCGCCTTGGGGTGGGATGTACACGGACGTACCGCCGACGGAGCCGTACGACCTGATCGCGAGGGAGAGCTGGGTGTCGGACGGGTCCGACATCGACGTTGGCGAGAAGAGGGAAACGCTAGTGGAAGAGCTACAGTTCCCCAAATCCATACCCCGCGTGTACACCTGCAGGTCATGCGGGATGAAATCGACCTCCCTAAAGGAGCTACGCGCGCACAAGGCACTCGTACACGGCTTGCCAGTACTTCCCACTTGTTCCGCCTCACACGTGCCGAAGCGGACGGCCAAACACGCCTCGCATACGTACAGCCGCCTCGTAACAGATAGGAAGATTAAGAAGGAGGAAAAATCGAATGAGGCCGAGATTCTGTCTGGTAATCTCTTAGCGATAGATAAGAAAGAACCTATCACACCAACAATTCTCCAAGTGTACGACACTTTAGAGGAAGCCAAACCCAAGATCGAAGGGTTGATCAAGATAAAGCAGGAGCCAAAACGAAGGCGGAAGGACTTCGTATGCCCTACGTGTAAAGTCGACCAGGGTAGTGACAAGGCGTTCAATGCTCACCTGAAGATACACCCCCTGGAGTGTCTAACCTGCGGCAAATGTTTCTTTAGAAGAGCGAACATGGCGCTGCATATGAAGATGCATTTAGGAATAAGGAATTACAAATGCGAAGTGTGCGAGAAGCGGTTTATAACTCGGCAGAAGTTGAAGGAACACCACAACGTGCACACGGGCCGCCAGCCCGTCAAGTGCACCGTGTGCGACGACACCTTCCGGAGATACTCCAACATGGTGCAGCATAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCCGTGCGGCGCCGTGTTCCACTCGCGCGCCAAGCTGCTGTGGCACAAGGAGACGCACGACGACAAGCCCAAGGCGTGCCACTACTGCAGCGACAAGTTCGTGCACGCCAGCAGCCTGACGCGCCACGTGCGGCGCTCGCACAACGCCTACTTCCTGTCGGAGCGCGGGCGCGCGCGCGCCGAGAACGCGGCGTGCCCCGTGTGCAAGCAGGTGTGCCTGCGCGCCAACCTGCGCGCGCACCTGGCCACGCACAGCGGCGCGCGCCCCTTCGCCTGCGTCGTGTGCAACAAGGCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACATGTCGCGCTCCGCCAAGCCCTACAAGTGCTCGCTGTGCGCCAGCGCCTTCGTGCGCCACTCCGAGTTCGTGTCGCACATGAACGCGCACAAGTGCGTGCGCCCCTACACCTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGAGGCACGTGCGCGAGCACGAGATGGCCAAGAAGTTCGTGTGCAAGGTTCCCGAGTGCGGTAAGTCCTTCCATCGGAGCTACTACCTGTCCGAGCACATGAAGGTGCACAGTGGCGCGAGGCCGTTCTCGTGCAACATCTGCGGGAAGACCTCGAGCAACAAGTCCAACCATAACAAACATGTCAAGATCCACCACGCGCGGGAGCCCGTCGCCACCGAGGCGTAA
- Protein Sequence
- MDPLVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCNLTTKAPSYGSRTTTPLHSERSYRSRSRTPAPEDTRWNGSHRSDDRYWRRTPSRTPKTSSMSSSTRNGATDVRISDMNFENNCSSVSTGQLSGAPFIMKADKIQQTYQSPPISEFDPQYIYYDQQEDREIKYSRSAEYNSISSPNNMFTYNNVVPAVGPGVKLVPAVNKRGNELTKILPKPNNILLKNMGGVQYVSPGTKPMHMVVPSASTIVQKNVQNNMIMTSNMPNLQIQVDNKRGAPPVTTNQMHHITSSGFTPGTTVVTQNSQIIYREMVNNVDGKPYITSMPTVASAHDNVTNLAQTSSLYQNVMVVDQFGNTSCMYTTPQQIMPKCPTTIYNETLPSRQTPTLPLRHTPTLPLRHTPTLPSRQTPTLPLRQTPTLPMHENKSSQSASDPKTLIIEVGPIAPSVPENMCESASPGRSPSNSNSSVEKPERQITENVDSKSETQGVTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGPNDSDYHVELVPSPEKILPDLDDTDNDNVNIHIVSDDSIHPSNSSTDDASSTFTVIKCKSSPEGLDKNIDDNKIDTEFSDSCPVPDLICNEKPSISPCSELSENGDNSTDRTSISPKPAISQVSHNNIDITEKKILVPQKPYRHNPLRLNNIYVKKNKKILQIKNAKTSTPSKSTKTLATVASSSNKAPENFTMNKLHQPDKSDKEKSSVLQTISVEEIKETDDNNEFDADTEEQSMDIEPVAPSSMNEPPQFTATVELQCVHVKEEINTSNEGGFSNHTATSDRDLAPMETLRPINVVSYANMAGDFEDDSNDRELLDLETASKNKQFVNMMNENYFGDNIYADYFTPDRVETFEAEREAAGYKEGTKDGMYNIWGEPSQKENENEFVLPNFIHESYKIAESSGIDYSEMGAEEQGDVEGEPDSKVDVLSEGRSESEAPLNICADERMPPRGELSGQESNGDMESPWGGMYTDVPPTEPYDLIARESWVSDGSDIDVGEKRETLVEELQFPKSIPRVYTCRSCGMKSTSLKELRAHKALVHGLPVLPTCSASHVPKRTAKHASHTYSRLVTDRKIKKEEKSNEAEILSGNLLAIDKKEPITPTILQVYDTLEEAKPKIEGLIKIKQEPKRRRKDFVCPTCKVDQGSDKAFNAHLKIHPLECLTCGKCFFRRANMALHMKMHLGIRNYKCEVCEKRFITRQKLKEHHNVHTGRQPVKCTVCDDTFRRYSNMVQHRDRHHLQKRAKVRDFVCPCGAVFHSRAKLLWHKETHDDKPKACHYCSDKFVHASSLTRHVRRSHNAYFLSERGRARAENAACPVCKQVCLRANLRAHLATHSGARPFACVVCNKAFTTKWNLKLHRWTHMSRSAKPYKCSLCASAFVRHSEFVSHMNAHKCVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909172;
- 90% Identity
- iTF_00638059; iTF_01167026;
- 80% Identity
- -