Basic Information

Insect: Leptopilina syphax
Gene Symbol: -
Assembly: GCA_032872505.1
Location: CM065468.1:4817439-4822162[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.25 48 6.0 1.8 1 23 447 469 447 469 0.97

2 19 0.018 3.6 9.6 0.5 2 23 504 525 503 525 0.96

3 19 3.3e-05 0.0063 18.2 0.9 1 23 576 598 576 598 0.95

4 19 0.07 14 7.7 0.2 2 23 602 623 601 623 0.95

5 19 0.00029 0.056 15.2 2.4 2 23 657 678 656 678 0.97

6 19 0.00022 0.043 15.6 2.2 1 23 682 704 682 704 0.98

7 19 0.00097 0.19 13.6 0.4 1 21 710 730 710 734 0.92

8 19 0.00019 0.037 15.8 4.2 1 23 800 822 800 822 0.97

9 19 4.4e-05 0.0085 17.8 3.8 1 23 866 888 866 888 0.97

10 19 0.00031 0.059 15.2 0.7 1 20 893 912 893 914 0.94

11 19 0.051 9.9 8.2 0.3 2 23 925 946 925 946 0.97

12 19 3.1e-05 0.006 18.3 0.6 2 23 985 1006 984 1006 0.97

13 19 2.8e-05 0.0055 18.4 1.6 1 23 1011 1033 1011 1033 0.95

14 19 0.00016 0.031 16.0 2.9 1 23 1039 1061 1039 1061 0.98

15 19 5e-06 0.00097 20.8 0.4 1 23 1077 1099 1077 1099 0.95

16 19 4.1e-07 7.9e-05 24.2 0.6 1 23 1105 1127 1105 1127 0.99

17 19 0.0002 0.039 15.7 0.2 1 23 1133 1155 1133 1155 0.97

18 19 0.00083 0.16 13.8 4.2 1 23 1161 1183 1161 1183 0.96

19 19 0.012 2.2 10.2 0.4 1 20 1189 1208 1189 1210 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.25	48	6.0	1.8	1	23	447	469	447	469	0.97
2	19	0.018	3.6	9.6	0.5	2	23	504	525	503	525	0.96
3	19	3.3e-05	0.0063	18.2	0.9	1	23	576	598	576	598	0.95
4	19	0.07	14	7.7	0.2	2	23	602	623	601	623	0.95
5	19	0.00029	0.056	15.2	2.4	2	23	657	678	656	678	0.97
6	19	0.00022	0.043	15.6	2.2	1	23	682	704	682	704	0.98
7	19	0.00097	0.19	13.6	0.4	1	21	710	730	710	734	0.92
8	19	0.00019	0.037	15.8	4.2	1	23	800	822	800	822	0.97
9	19	4.4e-05	0.0085	17.8	3.8	1	23	866	888	866	888	0.97
10	19	0.00031	0.059	15.2	0.7	1	20	893	912	893	914	0.94
11	19	0.051	9.9	8.2	0.3	2	23	925	946	925	946	0.97
12	19	3.1e-05	0.006	18.3	0.6	2	23	985	1006	984	1006	0.97
13	19	2.8e-05	0.0055	18.4	1.6	1	23	1011	1033	1011	1033	0.95
14	19	0.00016	0.031	16.0	2.9	1	23	1039	1061	1039	1061	0.98
15	19	5e-06	0.00097	20.8	0.4	1	23	1077	1099	1077	1099	0.95
16	19	4.1e-07	7.9e-05	24.2	0.6	1	23	1105	1127	1105	1127	0.99
17	19	0.0002	0.039	15.7	0.2	1	23	1133	1155	1133	1155	0.97
18	19	0.00083	0.16	13.8	4.2	1	23	1161	1183	1161	1183	0.96
19	19	0.012	2.2	10.2	0.4	1	20	1189	1208	1189	1210	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTTGAAATAAATACGTCGGAGTCACCGCAAAATGAAGAGGGAATTGTATCAGCAATGGAAATATGTAGAGTTTGCCTCCTTGGAAATTTATTAATGCGAGACCTATTTCATGATAATGGGGTCGCATCATTGTCCGCTAAGGCCATGAGCTTTACCAACGTTAAGatGTTACCTGGTGATGGACTACCAGGACAAGTTTGTTGTGATTGTGCTGATAAATTAGAAGCTGCCTATGATTTTAAATTACAAGTAGAACAAGCTGACAGTGTGTTGAGAGAAAAATTTGACACTTTGAATATAAAAGaagagttattttttaatgacgTGGAAGTTCATTTAGAAGGAGAGAGAACGAGAGTAAGACGTGAAATTAATGATAATGGTGAATATGTTGAGGCGACAGAATCTTTGCACGACGATGGTAGAGACACTCTTTTAAAGGATCATCTTGCTCTTTTGcaagtagaaaaaattgcagAACAAGAGAGCATGTTACAGCACgGTGTAGAGCACTTGCAAGAGCAACTTCAGGAAGAATTGCACGAGGGTGAATTGGAAGAAGAGGATTTGCAGGAGGAAGAGCAACTACAGGAGCAACATTTGCAGGAACAGCATTTGCAAGAGGAACATTTACAGGAACAACATTTACAGGAACAACATTTACAGGAACATCATTTACAGGAACATCATCTGCAAGAACATCATCTACAAGAGCATCATTTACAAGAGCATCATCTACAGGAACAACAGATGCAAGAAGAACATCTTCAGGAAGAACATTTACAGGAGGAACATTTACAAGAGCAATTGCAAGACGATGATGATCTAGCCGATGATCTCGATAAACAACCAAACGATGAATTACTCCATTTACAACAAATTTCCCAATCAGTCCACAATTTTTCCGATcaacaacaacagcaacaacaacaacaacaacaacaacatgGCATCAAGGACGAAAATCTCCAGGACGTTGAGCCTGAAAATATTCAAGAACAAAATTATCTCGATCAACAGGAATGCTCACAAATGAGTGATGACGATTTTAATAACGACGAACCTTTCGCTGACTCCCAAGAGTCCATGGAATATTCAACAATGGAGAAGGAAGGAGAAATGGAACAAGAACAGAATCAGGATCAAGATGCTTCCATTGAACAAATGGAACACGACTCGCCAGAAAGTGAAACACGTCGTATTAGACGTAAAGTGATACGTCAATCGACCGGATCGGAGCACAATTCCGACGAGgagaattatttcgaaaatttgaatttaagttCACGTTTGAAGAAGACACAGGACGGGCAATCAGAGAAGGTCTTCTTTATGTGTTATCtttgtgataaagaatttttatcgaAGGGAATTTTAAAGGAACATATGCACTCACACGAGGAGGTGAGACGAACTCTCTCCTTGAagaaaAAAGTTCCGGTCACGCCACAAAAATCAGCATTACCTTTAAAAACTCCTCCATCTGGTAAAAAGGCGAATAAATGCCCGTATTGTGGTAAAGAATATCTGTACATAATTTCCTTCAATAAGCACATAAAACAACACGAGAAGGATAAAGACGTAAAAAAGAGTGAATTTATGGCAGGCGATGATGATTCTGTCGATTACGTTGAGAATGTGAATTCCATCGGTGTTTTAGAGACAAGCATCGATGACAATGATTCCGAATCGGAAAATGAGAAAGAATCGGAAGTTTATCAATGCGAAAAGTGTCCTGAGAAATTTAGCAATAGACGCGCACTCCAGAAGCATGGAGTGAAACACATAAATTTGAAATGTTCGGTTTGTGATGTAGAATACGAATCGTTTGAGAAGTTGAACGAGCATCGAATTGAACACGTCACCGAGGGTGTATTAACCGAGGATGATTTACGCAAAGACGCCGAAGAATGGAATGCCCTCGACGACAAATCAGAAACAGATCAAAAGAACGAATTAAAATGTCCCCACTGTACATTGTTGTTCTCATACAAAAAATCCCTTTTAAAACACATCGAGACACATGCAAATAAATTCACCTGTAAAGTTTGTGGCAACGTTTTCATGAAACGGGAACACTTGTCAAAACATCTAGAAAGTCACGTGAGACCAAAATCATTCAAATGCACCGAGTGCACCAAAGTTTTCGGCAATGAACTCACTTTACGTAATCATCTAATAGCCACGAGTCACAAGACAATTCTCCAAGGGGAGGAATACGATCCAAACAAGAGATTGAAGCGGGTCGCAGCCAAAGCCGCACAGAAGATAATCgacaaaattaaaatcgaaGACGAGAGTGACTTCGACGAGGAGGCCAAAAAGAAGGACGTCAATTATCAAGAAGAGTTAAAATCACCATCTAAAAGGACATACAGCAAAAAACTATTCGAATGCGAGACTTGCACCAAAAAATGCAGTTCCAAACAGTCGCTAACAAAACACATGGAACTACACGTCAAGGATGAAAAAAGCGACAAGATCAAACTGGAGAAAAAGGACCCAGAGAAATTCCTCGACGACACCGACGACACCGACGATCGTGACGACGATTTCGAAAGCGGTCTCGACTGGCCCATGGACAATCACGAGTGTCCCACCTGCAAGAAGCGATACAGCACCAAAAAATCCCTCCTCAGGCATCAACTCCTCCACGAGGAGCCCAATTTCGAATGTGACATTTGCAACGTGAAATTCTACCGCAAAGACAAACTCAAAGCCCATTACGACAAGTGCTCCGAGAAGAATCCCGATCAAGTCCGAAAGTGCAACATTTGCGGCGACAGTTTCGAGAATAACGAAATACTCCGCGAGCATCGCGCCAAACACGTGACCGAGGGAATCCTCACCGAAGAGGACCTCCGTGAAATCGAGCCAAGGCCCGAGGAGAGAAAATCCGGCGAGAAAATCCCCCGAAAACGACGCACCGATATCGTCGGTCTCGAATGCACCGAATGCAATAAACAATACACCTCCCGCAAGGGTCTCCTCCGACACATTCAAGTCCACGAGGGCAAAAAATACCTCTGCGACATTTGTCCAAAGAAATTCTACCGCCGCGAACACCTCAAGATCCACGTCGCCAAACACAACATGATCAAACCCTACAAGTGCACCCGCTGCACGAAACGCTTCATCAAAGAGGAACAACTCACCAATCATCTCTCAAAACACGAtcgtaatttcaaaaaaaacaaagaGACAGACAGTTCCAAGCGTTTCCTCTGCGAAATTTGCTCCAAGAGTTTCACCCAGTCGACAACTTTAATTGCCCATTTGCGCGCTCACAACGGCATCAAACCATACGTGTGCGAGGTGTGCTCCCGCCCCTTCACCACAAACGCCTATCTCAAAATGCACATGCGAACACACACCCAGGAACGTCCTTACATCTGTCAATTCTGCTCGCGAGCCTTCGCACGCGCCGACACTCTCGCCAATCATCTCACATCCCACACTGGCGAGGCCAAGTACCACTGTAAATTCTGTCCGAAAAATTTCCGCCGTCTAAAATCACTCAAGGAACACGTCTTTATTCACACCGGTCAAAGACCCTACGCGTGTCCCACTTGCGATCGACGCTTCAACAACAATGGCAGTCGTTACGCTCACAGTAAACGTTGCAAGCAAAATATGCTCCAAAATCAAAATCGTGCGCAACTTGTTTCGCAAGTGCCACAGCAGCAGATACAGATACAGCAACACCAGCAGCAGCAACAACAGCAGCATCATCATCAACAGCAACATCAGAAATTACACCAGACTATTGTTCAGAGTCCATTGATCAAGTCGCAGAATATAAAGACAATCACCATTGCCAGACAAGCGGAACCGATGACAGCTCAACATGTCATGCAGCATCAGGAAATTCTCATGCCACTTATTTTGCCATTGACAGTGACACTTGCCGATGTTGGGGAGGAAGTCATTCTGCCCGAGGGTACGAAAATATTCACCACCTCTTAG
Protein Sequence: MDAVEINTSESPQNEEGIVSAMEICRVCLLGNLLMRDLFHDNGVASLSAKAMSFTNVKMLPGDGLPGQVCCDCADKLEAAYDFKLQVEQADSVLREKFDTLNIKEELFFNDVEVHLEGERTRVRREINDNGEYVEATESLHDDGRDTLLKDHLALLQVEKIAEQESMLQHGVEHLQEQLQEELHEGELEEEDLQEEEQLQEQHLQEQHLQEEHLQEQHLQEQHLQEHHLQEHHLQEHHLQEHHLQEHHLQEQQMQEEHLQEEHLQEEHLQEQLQDDDDLADDLDKQPNDELLHLQQISQSVHNFSDQQQQQQQQQQQQHGIKDENLQDVEPENIQEQNYLDQQECSQMSDDDFNNDEPFADSQESMEYSTMEKEGEMEQEQNQDQDASIEQMEHDSPESETRRIRRKVIRQSTGSEHNSDEENYFENLNLSSRLKKTQDGQSEKVFFMCYLCDKEFLSKGILKEHMHSHEEVRRTLSLKKKVPVTPQKSALPLKTPPSGKKANKCPYCGKEYLYIISFNKHIKQHEKDKDVKKSEFMAGDDDSVDYVENVNSIGVLETSIDDNDSESENEKESEVYQCEKCPEKFSNRRALQKHGVKHINLKCSVCDVEYESFEKLNEHRIEHVTEGVLTEDDLRKDAEEWNALDDKSETDQKNELKCPHCTLLFSYKKSLLKHIETHANKFTCKVCGNVFMKREHLSKHLESHVRPKSFKCTECTKVFGNELTLRNHLIATSHKTILQGEEYDPNKRLKRVAAKAAQKIIDKIKIEDESDFDEEAKKKDVNYQEELKSPSKRTYSKKLFECETCTKKCSSKQSLTKHMELHVKDEKSDKIKLEKKDPEKFLDDTDDTDDRDDDFESGLDWPMDNHECPTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLREIEPRPEERKSGEKIPRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRNFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQFCSRAFARADTLANHLTSHTGEAKYHCKFCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQNRAQLVSQVPQQQIQIQQHQQQQQQQHHHQQQHQKLHQTIVQSPLIKSQNIKTITIARQAEPMTAQHVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00882374; iTF_00881465; iTF_00879917; iTF_00880659;
90% Identity: iTF_00881465;
80% Identity: -