Basic Information

Insect: Lasioglossum calceatum
Gene Symbol: -
Assembly: GCA_963966675.1
Location: OZ016549.1:3828321-3832584[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 9.3 1e+03 1.1 0.1 3 17 60 74 59 75 0.91

2 21 2.2 2.4e+02 3.1 5.7 2 23 242 264 241 264 0.96

3 21 0.016 1.8 9.8 2.5 1 23 312 334 312 334 0.97

4 21 0.03 3.3 8.9 1.9 1 23 383 405 383 405 0.98

5 21 0.052 5.6 8.2 0.4 1 19 462 480 462 482 0.93

6 21 0.00041 0.045 14.8 1.5 1 23 523 545 523 545 0.96

7 21 0.0003 0.033 15.2 0.3 1 23 594 616 594 616 0.97

8 21 0.00077 0.084 14.0 0.1 1 23 622 644 622 644 0.97

9 21 3e-06 0.00033 21.5 0.3 2 23 688 710 688 710 0.96

10 21 0.00016 0.017 16.2 0.7 2 23 718 740 717 740 0.95

11 21 6.6e-05 0.0072 17.3 0.1 2 23 748 770 748 770 0.97

12 21 6.3e-05 0.0069 17.4 0.1 1 23 778 800 778 800 0.94

13 21 0.036 3.9 8.7 0.4 1 20 860 879 860 879 0.97

14 21 1.9e-05 0.0021 19.0 0.3 1 23 897 919 897 919 0.97

15 21 7.8e-05 0.0085 17.1 0.9 1 23 937 959 937 959 0.97

16 21 0.0011 0.11 13.5 7.2 1 23 981 1004 981 1004 0.94

17 21 0.015 1.7 9.9 1.6 2 23 1063 1085 1062 1085 0.93

18 21 0.0052 0.57 11.4 1.7 2 23 1120 1142 1119 1142 0.92

19 21 0.021 2.3 9.4 0.0 1 23 1149 1173 1149 1173 0.93

20 21 1.3 1.4e+02 3.8 2.3 1 23 1178 1201 1178 1201 0.96

21 21 0.052 5.7 8.2 2.3 2 23 1231 1253 1231 1253 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	9.3	1e+03	1.1	0.1	3	17	60	74	59	75	0.91
2	21	2.2	2.4e+02	3.1	5.7	2	23	242	264	241	264	0.96
3	21	0.016	1.8	9.8	2.5	1	23	312	334	312	334	0.97
4	21	0.03	3.3	8.9	1.9	1	23	383	405	383	405	0.98
5	21	0.052	5.6	8.2	0.4	1	19	462	480	462	482	0.93
6	21	0.00041	0.045	14.8	1.5	1	23	523	545	523	545	0.96
7	21	0.0003	0.033	15.2	0.3	1	23	594	616	594	616	0.97
8	21	0.00077	0.084	14.0	0.1	1	23	622	644	622	644	0.97
9	21	3e-06	0.00033	21.5	0.3	2	23	688	710	688	710	0.96
10	21	0.00016	0.017	16.2	0.7	2	23	718	740	717	740	0.95
11	21	6.6e-05	0.0072	17.3	0.1	2	23	748	770	748	770	0.97
12	21	6.3e-05	0.0069	17.4	0.1	1	23	778	800	778	800	0.94
13	21	0.036	3.9	8.7	0.4	1	20	860	879	860	879	0.97
14	21	1.9e-05	0.0021	19.0	0.3	1	23	897	919	897	919	0.97
15	21	7.8e-05	0.0085	17.1	0.9	1	23	937	959	937	959	0.97
16	21	0.0011	0.11	13.5	7.2	1	23	981	1004	981	1004	0.94
17	21	0.015	1.7	9.9	1.6	2	23	1063	1085	1062	1085	0.93
18	21	0.0052	0.57	11.4	1.7	2	23	1120	1142	1119	1142	0.92
19	21	0.021	2.3	9.4	0.0	1	23	1149	1173	1149	1173	0.93
20	21	1.3	1.4e+02	3.8	2.3	1	23	1178	1201	1178	1201	0.96
21	21	0.052	5.7	8.2	2.3	2	23	1231	1253	1231	1253	0.94

Sequence Information

Coding Sequence: atggACGAGGTGGTGGTGTTGCAGAACATGGAAAATGTGTGCAGGCTCTGCCTCTCCGGCGACGAGCCGAAATTATCGGTGTTCGGGTCGCAAGAAACTCCGGTACCACTGGCTACTAAGATCCAAACCTGCCTATCGATCCAGATTTTAGCCACGGACAGGTTGTCGACGCAGATATGTACACAGTGTGTGAAAAATGTGAATCAGTGGCATAATTATAAGGAAGCTTGCCTTCGCTCGCAAGATAAATTACACCAATGGTTGGACAGACATGTACGATGCAATCCGATGGTTGTGACTATCAAAGACGAACCCGTCGATCTGGACTTCTATGAAGATAATATTGAGGTCATTTCTGAGTCTACCGTTGATTCGGACTTACAATCAACTAATATGGAAGAAAGTCACGACTCCGTAAACATGCTTCACATCCAAGAGATAACTGACGACGAAGAGGATCATACAAGAGTTACGCCAACATTAACGAAAGATTTAGATGTCTGTGTAAAGCCAGAGCCGGCAGAGGACTGCGATACAGACTGTACTATAGAAATAGAATCTGTAACTGGCAACGAACTGGTATTGAATCACCTTTCAAACAAGGAAGATAGAGTAATGGAGGCAGATTCTACGCAGAAGTCCAAAGCGTCAACATCAGCGAGTAAAAAGAAACTGAGAAGGGGTCCTCATACTCATTACAGAGGAATACGTGCGTTTAAGCAGAAGTGCGTGCACTGTCAAATCTTTCTACATTCTAAATATTCGTATTCCAAGCACATGGAGAGATTCCATACAGAAAAACAGAACGGTGATGCTAACGAACAGTTGAAAGACGAGGAAGAGGTTGAAGATCTGGAAGATGAGCTGATGAGTATGGAGAAAGATGCTCCGCTGACTCAAGTGCAGCAGAACATAAtcagtcaattgaaaactttttCGTGTTACTCCTGTCAGCAATCGTTCAGCGATCGTAGAAGTACGCTTTCTCATATTCGTCAACATATGCCGGATCTGAGACCGTACACGTGTATCGCATGCTTAACAGAGTTCCCTGACCGCTCGATGTACAAAATGCATTGCGGCGCGTCGTTCGAATGTGCAATGAAAATTGCTCTGGTGATACCGAGCGAGGGCGAAGAGAAATATTTCACGTGTAACATGTGTCTGCGTTCGATGCGAAACAGAAAAGAATTGCTCAGCCATCTCTCGAAACACTCCGACAAACAGTATCAACAACTAGTTTCACCGTCGCGATCACCTCCTAAACTGAAACCAATTTCACCTCTGCCGGCGCCTAAACAAGAATCTCCTACAAAGAAATCGATCGGAGGCGGAGGTTTGGAAATTCCGTTCCCTTACAAAAACGGCGATCCAGCCCATAATCACATTTGCGATTTGTGCGGTATGATCTACAGATACAAGCCGAACATGTTCAAGCATAAAGACTTGTGCCAGCGTTTGCAGCCGGGAATTCGAACCTCCTACAAATGCATACACTGTGGAATGACCTATCTGGTATTCAAAAAGTTCCACAACCACATCACTATAGACCATAAAAAGAAAGACTTCTTCTGTTCCGAGTGCGGTGCTAAATTTCGATCTCCTAGTGAGTATTTGACACATCACGATATGCATCGTGGCACACAGAAGAAGAAGTCGGTGCTGGAAAAGGGCGGACCATCTCCTAACACTAACACGCAGAACTTCTCATCACCCATCAAAGATTGGGACACGTTCGAAGCTGAAATGAACTCTAGTAGAATATCTGACAGCAACCGGTATAGTTGTGCTTTGTGCAACTTGGAGTTTTCCACCAGAGCTGAACTGACAGAGCATAGGAACCTTCATCTCAAGGTTAAGATCTATTCGTGCGTGATCTGCCGCAGCATGTTCAGCAGTGCGGGTGCATTGGAGATCCACATGAAGGATCATGGCATAGAGGACCCCAACGAGAGAAACGCGAACAGCTCGTGCGTAGAGTATGGAACAATGAACAACTCTTCAGAGGATTGTAAACCGGTGAATATGAGCGCCACATCAGACCCGGGTACTGAAAAGAACGAATGTCGCGAATGCGGCAAGGTATTCTCGAACTATGCGAACGTTAGACGACACATACGTAACATTCATAAGACTAACAAGTTTCGCGTCAGTTGCAATCAATGTTCTCGGAAGTTCAAAACCAAGGAGTCCTTGGGCAGGCACATCGCGAGCGAGCACAAGGTCACGAAGGCTGTTCGCCAGTGTCCTCTGTGTCCAAAGACCTTCGTCTTCCAAGCGAACTTGGACCTTCATTATCAGACCGCTCATAACAACATGAAGAGTGGTGGTTATAAATGCGATATTTGCGGTAAGGCGTTCATAGAGGAAACATCCCTGAAAATACACCGAGGATGGCACAACAGAACGAACTCTCGACTGAGCTTGCGAACAACGCCGAAAACGCCAGAAGATCGGAAACCGGCCAAGGATACGCTCACGCCTAAGCAAGAGAAGGTGTTCAACACCAATTCCGAAAAGCCCGCCAGAGCCAGAAAATCATTTCCCAATTCGCCGCCCGTGAAACCTGAGGGTAAATTTCAGTGTCAGGTATGCAACGACAAGTTCAACGATGTCACCGAATTGAGGAAACACTTGTGGGACGTCCACTGCTCCCACAAAACCGAGAAAAGTTTTGCAGACGAAGAGTTCACGTGCGAGATCTGCAACCATATCTTCCCTGACAAAGAGTCGCTGACCATTCACATGGAGTGGCACAAGTCGTGTCCGAACCTGAGTTACGTCAGGAAAGCTAGGAAGCAGAGTAACTTCCCGTGCGACGTTTGCGGGAAATTCTACAGCTCGAAGAAGGTGCTATGGAGACACAAGAAGCTTCATAAAGTGACGAACCTCGCCGCCGTTAAATTGCAATCCATAGTCAAGAAGCCGATCCCGAATCAGCACATATGCAACATTTGCCACAAGACCTTTTGCAGCAACCAGTCTCTGCTACGTCACAAGATGAACCTGCACAAAGATTTATCCAACCAGCGGTCGCAGTCGATGTTCTCTGGTACGAGAAGGATGTCCCAGGGGGGGCCTAAAGTGAAGAAGATGAAACTAGAGGAAGACGCGGAGATGGAAGAGGAGGTTCTGCAAAAACCCGTGGTAGCCGGAAATTCAACGAACGTCGGCAAGAAGCCGGTCATGTGTCACGTCTGCAGCAAGTTCTTCGCGAACATGAGCGTGCTATATAAACACAAACAATTGATGCACAGCAAGTCTCGGCCGACGAAAAACGTCGGGAAGGCGTCTTCGTCCGCGTCCTCGATCTCGACGTCGCAATGTATCCCGTTGGCCGGAGAGGATGGCAAAGTTTCCTGCAACGTCTGCTACAAGTCGTTCTCTGCGATATCGCACCTGCGCCAGCACTTCACCATCAAGCACAAGAACAGCCCACCCAAGTTCGCCTGTCCTATCGACGGTTGCAAGCTGATGTTCCCATCTGCGGCGGCTTTGAGGGCCCACGAGGTATCCCACACCAGCATGATCTTCAACTGTAATCTGTGCCGTCGCCATATGTTCAACAGGCAGGCGATGACCGACCACATGCTGACCGCGCACAACACCGTTTACGATGCTGAAAAGAGCAAAAACTTCCACAGAGAGGCGGACCTGAGTCTCTACGTTGTGCAGAACGCGGTCGACGCAACTTGCCCTCACTGCAAGATCAAGTATCCCAACAACAGAGCCATGAAGATCCATTACTTTAAGTTCCACGACTACTTACAATAA
Protein Sequence: MDEVVVLQNMENVCRLCLSGDEPKLSVFGSQETPVPLATKIQTCLSIQILATDRLSTQICTQCVKNVNQWHNYKEACLRSQDKLHQWLDRHVRCNPMVVTIKDEPVDLDFYEDNIEVISESTVDSDLQSTNMEESHDSVNMLHIQEITDDEEDHTRVTPTLTKDLDVCVKPEPAEDCDTDCTIEIESVTGNELVLNHLSNKEDRVMEADSTQKSKASTSASKKKLRRGPHTHYRGIRAFKQKCVHCQIFLHSKYSYSKHMERFHTEKQNGDANEQLKDEEEVEDLEDELMSMEKDAPLTQVQQNIISQLKTFSCYSCQQSFSDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKMHCGASFECAMKIALVIPSEGEEKYFTCNMCLRSMRNRKELLSHLSKHSDKQYQQLVSPSRSPPKLKPISPLPAPKQESPTKKSIGGGGLEIPFPYKNGDPAHNHICDLCGMIYRYKPNMFKHKDLCQRLQPGIRTSYKCIHCGMTYLVFKKFHNHITIDHKKKDFFCSECGAKFRSPSEYLTHHDMHRGTQKKKSVLEKGGPSPNTNTQNFSSPIKDWDTFEAEMNSSRISDSNRYSCALCNLEFSTRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANSSCVEYGTMNNSSEDCKPVNMSATSDPGTEKNECRECGKVFSNYANVRRHIRNIHKTNKFRVSCNQCSRKFKTKESLGRHIASEHKVTKAVRQCPLCPKTFVFQANLDLHYQTAHNNMKSGGYKCDICGKAFIEETSLKIHRGWHNRTNSRLSLRTTPKTPEDRKPAKDTLTPKQEKVFNTNSEKPARARKSFPNSPPVKPEGKFQCQVCNDKFNDVTELRKHLWDVHCSHKTEKSFADEEFTCEICNHIFPDKESLTIHMEWHKSCPNLSYVRKARKQSNFPCDVCGKFYSSKKVLWRHKKLHKVTNLAAVKLQSIVKKPIPNQHICNICHKTFCSNQSLLRHKMNLHKDLSNQRSQSMFSGTRRMSQGGPKVKKMKLEEDAEMEEEVLQKPVVAGNSTNVGKKPVMCHVCSKFFANMSVLYKHKQLMHSKSRPTKNVGKASSSASSISTSQCIPLAGEDGKVSCNVCYKSFSAISHLRQHFTIKHKNSPPKFACPIDGCKLMFPSAAALRAHEVSHTSMIFNCNLCRRHMFNRQAMTDHMLTAHNTVYDAEKSKNFHREADLSLYVVQNAVDATCPHCKIKYPNNRAMKIHYFKFHDYLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763380;
90% Identity: iTF_00865479; iTF_00863417; iTF_00860572; iTF_00862048; iTF_00862731; iTF_00864788; iTF_00864125; iTF_00866165; iTF_00866851;
80% Identity: -