Basic Information

Insect: Lasioglossum oenotherae
Gene Symbol: -
Assembly: GCA_028455765.1
Location: CM052281.1:1037565-1041819[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 8.7 7.2e+02 1.1 0.1 3 17 60 74 59 75 0.91

2 21 7.2 5.9e+02 1.4 6.0 2 23 243 265 242 265 0.96

3 21 0.015 1.3 9.8 2.5 1 23 313 335 313 335 0.97

4 21 0.19 16 6.3 1.6 1 23 384 406 384 406 0.98

5 21 0.049 4.1 8.2 0.2 1 20 463 482 463 484 0.92

6 21 0.00038 0.032 14.8 1.5 1 23 524 546 524 546 0.96

7 21 0.00029 0.024 15.2 0.3 1 23 595 617 595 617 0.97

8 21 0.00073 0.06 14.0 0.1 1 23 623 645 623 645 0.97

9 21 2.9e-06 0.00024 21.5 0.3 2 23 689 711 689 711 0.96

10 21 0.0002 0.017 15.7 0.4 2 23 719 741 718 741 0.95

11 21 3.8e-05 0.0032 18.0 0.1 2 23 749 771 749 771 0.97

12 21 0.00016 0.013 16.0 0.1 1 23 779 801 779 801 0.94

13 21 0.034 2.8 8.7 0.4 1 20 859 878 859 878 0.97

14 21 4.7e-05 0.0039 17.7 0.3 1 23 896 918 896 918 0.97

15 21 7.3e-05 0.006 17.1 0.9 1 23 936 958 936 958 0.97

16 21 0.0011 0.088 13.4 6.3 1 23 980 1003 980 1003 0.94

17 21 0.014 1.2 9.9 1.6 2 23 1062 1084 1061 1084 0.93

18 21 0.0019 0.16 12.6 0.7 2 23 1119 1141 1118 1141 0.92

19 21 0.011 0.92 10.2 0.0 1 23 1148 1172 1148 1172 0.93

20 21 3.6 3e+02 2.3 1.4 1 23 1177 1200 1177 1200 0.92

21 21 0.049 4.1 8.2 2.3 2 23 1230 1252 1230 1252 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	8.7	7.2e+02	1.1	0.1	3	17	60	74	59	75	0.91
2	21	7.2	5.9e+02	1.4	6.0	2	23	243	265	242	265	0.96
3	21	0.015	1.3	9.8	2.5	1	23	313	335	313	335	0.97
4	21	0.19	16	6.3	1.6	1	23	384	406	384	406	0.98
5	21	0.049	4.1	8.2	0.2	1	20	463	482	463	484	0.92
6	21	0.00038	0.032	14.8	1.5	1	23	524	546	524	546	0.96
7	21	0.00029	0.024	15.2	0.3	1	23	595	617	595	617	0.97
8	21	0.00073	0.06	14.0	0.1	1	23	623	645	623	645	0.97
9	21	2.9e-06	0.00024	21.5	0.3	2	23	689	711	689	711	0.96
10	21	0.0002	0.017	15.7	0.4	2	23	719	741	718	741	0.95
11	21	3.8e-05	0.0032	18.0	0.1	2	23	749	771	749	771	0.97
12	21	0.00016	0.013	16.0	0.1	1	23	779	801	779	801	0.94
13	21	0.034	2.8	8.7	0.4	1	20	859	878	859	878	0.97
14	21	4.7e-05	0.0039	17.7	0.3	1	23	896	918	896	918	0.97
15	21	7.3e-05	0.006	17.1	0.9	1	23	936	958	936	958	0.97
16	21	0.0011	0.088	13.4	6.3	1	23	980	1003	980	1003	0.94
17	21	0.014	1.2	9.9	1.6	2	23	1062	1084	1061	1084	0.93
18	21	0.0019	0.16	12.6	0.7	2	23	1119	1141	1118	1141	0.92
19	21	0.011	0.92	10.2	0.0	1	23	1148	1172	1148	1172	0.93
20	21	3.6	3e+02	2.3	1.4	1	23	1177	1200	1177	1200	0.92
21	21	0.049	4.1	8.2	2.3	2	23	1230	1252	1230	1252	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGTGTTGCAGAACATGGAAAATGTGTGCAGGCTCTGCCTCTCTGGCGACGAGCCGAAATTGTCGGTGTTCGGGTCGCAAGAAACTCCGGTATCACTGGCCACTAAGATCCAAACCTACCTATCGATTCAGATTTTAGCCACGGACAGGTTGTCGACGCAGATATGTACACAGTGTGTGAAAAATGTGAATCAGTGGCATAATTATAAGGAAGCTTGCCTTCGCTCGCAAGATAAATTACATCAATGGTTGGAGAGACATGTACGATGCAATCCGATGGTTGTGACTATCAAAGACGAACCCGTCGATCTGGACTTCTATGAAGATAATATTGAGGTCATTTCTGAGTCTACCGTTGATTCAGACTCACAGTCTACTAATATGGAAGAAAGTCACAACGACTCCGTAAACATGCTTCACATCCAAGAAATAACTGACGATGAAGCGGATCATACGAGAGTTACGCCAACATTAACAAAAGATTCAGATGTCTGTGTAAAGCCAGAGCCGGCAGAGGACTGCGACACAGACTGTACTATAGAAATAGAATCTGTAACTGGCAACGAACTGGTATTGAATCCCCTTTCGAACAAGGAAGATAGAGTAATGGAGGCTGATTCTACGCAGAAGTCCAGAGCGTCAACATCAGCGAGTAAAAAGAAACTGAGAAGGGGACCTCATACTCATTACAGAGGAATACGTGCGTTTAAGCAGAAGTGTGTGCACTGTCAAATCTTTTTACATTCTAAATTTTCGTATTCCAAGCACATGGAGAGATTCCATACAGAAAAACAGAACGGTGATGCTAACGAACAGTTGAAAGACGAGGAAGAGGTTGAAGATCTGGAAGATGAGCTGATGAGTATGGAGAAAGACGCTCCGCTGACTCAAGTGCAGCAGAACATAATCAGTCAATTGAAAACTTTTTCGTGTTACTCCTGTCAGCAATCGTTCAGCGATCGTAGAAGTACGCTTTCTCATATTCGTCAACATATGCCGGATCTGAGACCGTACACGTGTATCGCGTGTTTAACAGAGTTCCCTGACCGTTCGATGTACAAACTGCACTGCGGCGCGTCGTTCGAATGTGCAATGAAAATTGCTCTGGTGATACCGAGCGACGGCGAAGAGAAATATTTCACGTGTAACATGTGTCTGCGTTCGATGCAAAACAGAAAAGAATTGCTCAGCCATCTTTCGAAACACTCTGACAAACAGTATCAACAACTAGTTTCACCGTCGCGATCACCTCCTAAACTGAAACCAATTTCACCTCTGCCGGCGTCTAAACAAGAATCTCCTACAAAGAAATCGGTCGGAGGCAGAGGTTTGGAAATTCCGTTCCCTTACAAAAACGGCGATCCAGCGCATAATCATATTTGCGATTTGTGCGGTATGATCTACAGATACAAGCCGAACATGTTGAAGCATAAAGACTCGTGTCAACGTTTGCAGCCGGAAATTCGAACCTCCTACAAATGTATACACTGTGGAATGACCTATCTTGTATTCAAAAAGTTCCACAACCACATCACTATAGACCATAAAAAGAAAGACTTCTTCTGTTCCGAATGCGGTGCTAAATTTCGATCTCCTAGCGAGTATTTGACACATCACGATATGCATCGAGGCACACAGAAGAAGAAGTCGGTGCTGGAAAAGGTCGAACCATCTTCTAAGACTAACACGCAGAACTTCTCATCGCCCATCAAAGATTGGGACACGTTCGAAGCTGAAATGAACGCTAGTAGGATATCTGACAGCAACCGGTATAGTTGTGCTTTGTGCAACTTGGAGTTCTCCACTAGAGCTGAACTGACAGAGCATAGGAACCTTCATCTCAAGGTTAAGATCTATTCGTGCGTGATCTGCCGCAGCATGTTCAGCAGTGCGGGCGCATTGGAGATCCACATGAAGGACCATGGCATAGAGGACCCCAACGAGAGAAACGCGAACAGCTCGTGCGTAGAGTATGGAACAATGAACAACTCTTCAGAGGATTGTAAACCGGTGAATATGAGCGCCACATCAGACCCGGGTACTGAAAAGAACGAATGTCGCGAATGCGGCAAGGTATTCTCGAACTATGCGAACGTTAGACGACACATACGTAACATTCATAAGACTAACAAGTATCGTGTCAGTTGCAATCAATGTTCTCGGAAGTTCAAGACCAAGGAGGCCTTGGGCAGGCACATCGCGAGCGAGCACAAGGTCGCTAAGGCTGTTCGCCAGTGTCCTGTGTGTCCGAAGACCTTTGTCTTCCAAGCGAATTTGGACCTTCATTATCAGACCGCTCATAAGAATGTGAAGAGTGGTGGTTATAAATGCGATATTTGCGGCAAGGCGTTCATGGAGGAAACATCCTTGAAAATACACCGAGGATGGCATAACAGAACGAACTCTCGACTGAGCTTGCGAACAACGCCGAAAACACCAGTAGATCGGAAACCGGCCAAGGATACGCTCACGCCTAAGCAGGAGAAGGACACCAGTTCCGATAAGCCCGCCAGAGCCAGAAAATCATTTCCCAATTCGCCGCCCGTGAAACCTGTGGGTAAATTTCAGTGTCAGGTATGCAACGACAAGTTCAACGATGTCACCGAGTTGAGGAAACACTTGTGGGACGTCCACTGCTCCCACAAAACCGAGAAAAATTACGCAGACGAAGAATTCACGTGCGAGATCTGCAGCCATATCTTCCCTGACAAAGAGTCGCTGACCATTCACATGGAGTGGCACAAGTCGTGTCCGGACCTGAATTACGTCGGGAAAGTTAGGAACCAGGGTAACTTCCCGTGCGACGTTTGCGGAAAATTCTACAGCTCGAAGAAGGTGCTATGGAGACACAAGAAGCTTCATAAAGTGACGAACTTCGCCGCCGTTAAATTGCAATCGGTAGCCAAGAAGCCGATCCCGAATCAGCACATATGCAACATTTGCCACAAGATCTTTTGCAGCAATCAGTCTCTGCTACGTCACAGGATGAATTTGCACAACGATTTATCCAACCAGCGGCCGCAGTCGATGTTCTCTGGCACGAGAAGGATTTCCCAGGGGGCGCCTAAAGTGAAGAAGATGAAACTAGAGGAAGACGAGGAGGTGGAAGAGGAGGTCCTGCGAAAACCCGCGGTAGCCGGAAATTCAACGAACGTCGGCAAGAAGCCGGTCATGTGTCACGTCTGCAGCAAGTTCTTTGCGAACATGAGCGTGCTATATAAACACAAACAATTGATGCACAGCAAGTCTCGGCCGACAAAGAGCGTCGGGAGGGCGTCTTCGTCCACGTCCTCGATCTCGACGTCGCAATGTATCCCATTGACCGGAGACGATGGCAAAGTTTCCTGCAACGTCTGCTACAAGTCGTTCTCCGCGATATCGAACCTACGCCAGCACTTCACCATCAAGCACAAGAACAGCCCACCCAAGTTCGCCTGTCCCATCGACGGTTGCAAGCTGATGTTCCCATCTGCGGCGGATTTGAGGGCCCACGAGGTATCCCACACCAGCATGATCTTCAACTGTAATCTGTGCCGTCGCCATATGTTCAACAGGCAGGCGATGACCGACCACATGCTGGCCGCGCACAACACCGTTTACGATGCTGGAAAGAGCAAAAACTTCCACAGAGAGACGGACCTGAGTCTCTACGTGGTGCAGAACGCGGTCGACGCAACTTGCCCTCACTGCAAGATCAAGTATCCCAACAACAGAGCCATGAAGATCCATTACTTTAAGTTCCACGACTACTTACAATAA
Protein Sequence: MDEVVVLQNMENVCRLCLSGDEPKLSVFGSQETPVSLATKIQTYLSIQILATDRLSTQICTQCVKNVNQWHNYKEACLRSQDKLHQWLERHVRCNPMVVTIKDEPVDLDFYEDNIEVISESTVDSDSQSTNMEESHNDSVNMLHIQEITDDEADHTRVTPTLTKDSDVCVKPEPAEDCDTDCTIEIESVTGNELVLNPLSNKEDRVMEADSTQKSRASTSASKKKLRRGPHTHYRGIRAFKQKCVHCQIFLHSKFSYSKHMERFHTEKQNGDANEQLKDEEEVEDLEDELMSMEKDAPLTQVQQNIISQLKTFSCYSCQQSFSDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKLHCGASFECAMKIALVIPSDGEEKYFTCNMCLRSMQNRKELLSHLSKHSDKQYQQLVSPSRSPPKLKPISPLPASKQESPTKKSVGGRGLEIPFPYKNGDPAHNHICDLCGMIYRYKPNMLKHKDSCQRLQPEIRTSYKCIHCGMTYLVFKKFHNHITIDHKKKDFFCSECGAKFRSPSEYLTHHDMHRGTQKKKSVLEKVEPSSKTNTQNFSSPIKDWDTFEAEMNASRISDSNRYSCALCNLEFSTRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANSSCVEYGTMNNSSEDCKPVNMSATSDPGTEKNECRECGKVFSNYANVRRHIRNIHKTNKYRVSCNQCSRKFKTKEALGRHIASEHKVAKAVRQCPVCPKTFVFQANLDLHYQTAHKNVKSGGYKCDICGKAFMEETSLKIHRGWHNRTNSRLSLRTTPKTPVDRKPAKDTLTPKQEKDTSSDKPARARKSFPNSPPVKPVGKFQCQVCNDKFNDVTELRKHLWDVHCSHKTEKNYADEEFTCEICSHIFPDKESLTIHMEWHKSCPDLNYVGKVRNQGNFPCDVCGKFYSSKKVLWRHKKLHKVTNFAAVKLQSVAKKPIPNQHICNICHKIFCSNQSLLRHRMNLHNDLSNQRPQSMFSGTRRISQGAPKVKKMKLEEDEEVEEEVLRKPAVAGNSTNVGKKPVMCHVCSKFFANMSVLYKHKQLMHSKSRPTKSVGRASSSTSSISTSQCIPLTGDDGKVSCNVCYKSFSAISNLRQHFTIKHKNSPPKFACPIDGCKLMFPSAADLRAHEVSHTSMIFNCNLCRRHMFNRQAMTDHMLAAHNTVYDAGKSKNFHRETDLSLYVVQNAVDATCPHCKIKYPNNRAMKIHYFKFHDYLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763380;
90% Identity: iTF_00861346;
80% Identity: -