Lhir013344.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- bab2
- Assembly
- GCA_947359425.1
- Location
- OX375800.1:12812555-12817906[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-28 5.2e-26 91.7 0.3 2 100 22 116 21 124 0.94
Sequence Information
- Coding Sequence
- ATGACAATGcaacagtattgtttacgatggaacaaccatcaaccgaacttcatttccgttttttctagtcttctcaacagtgagtcactggttgatgtcactttggcggctgaaggcaggcacttacaagcacacaaagtggtcttgtctgcctgtagttcatattttcaatcgttatttaccatcaatccttgccaacatcctattgtgatattaaaagatgttaagttcacggatttaaaagtcatggtcgactttatgtattatggagaagtcaatgtgtcacaagaacaactaccacacattttgaaaactgctgaaatgttgaaaattaaagGTTTGGCTGAAATTCCAGTCGACCAATCCGTTTCAAAAGCTCAAACTACTTCGACTGAAAAAACAGAATTGCTAACTCCAGGCGATGCTAATTGGCCTGAAGGAGGGCTGCGTCAATCATTATCACCTTCACCATGTCCTCTTTCTCCAAGTAGTAAACGAAAACGATTACGAAAATCATCTACAGGGTCAGGATCGGGATCAACAGAGAGAACGTCAGATGAGCTCCAATCCGGTGAAGTGACGTTAACATCGTCTAGTGGCAGCGGTATAAATACGGTTATAAAGACAGATCCTGGAGGCTACACCTCGGATAGCAGTAGTATATTACAGAAAGCCAAACAACACAGCAGCGATTCGGAGTTGCATAGAGGTAGCTCACACGAAAGTATTGAAGGAGAAATGTCGCATCATGTCACTCTGCAGGTTCCACAAGAAGTAACTGTTCAACATAACGTAGAATCAGCAGGTCAAGACGTATCTGGACACTCTTCTAGTACATCTCAACTAACTTTAACAGGCATGCAATGGAACGTGATGGACCAAAATGCTTACGCCCAATTCACTTCTTGTACTTCCCCTACAATTATAAATTCTCAAACGTTTACCCAATGTGCAGCACCTCTTAACCAATCCATTAGTCCGTCTTCTCCAAACACACAATGCTATCAAAACCAAATTACAAATTCTCCTCCTCAAATAATTCAAAAGCGAAAAAGAAGCATCAATCCTCAGGGCGATGAAAACTTCATCAGAGCATTAGAAGCAGTGAGGTTTGGTGGAATTGGTTTTTGTAAAGCCGCTCGAATGTACGGTGTGAATAATCGTACGCTTTGGTTAGAATATAAGAAAAGGGGTTATCCGAATTTTCGTTTAAGTATAAAAAACAGAAAGCAAGAAAATGCACATTCTGTTTCTGGTGAAAATCAACCGCCCCCTAGCCCTCAGAACGAAGCGCCTTCCACTGAAAAACATGAAGTCGAACAAACTCATCCGGTTGCCTTGATTAATAGTGCTTTTTTTGACGGAAAACATGTAGATTTAGGAACTGTTCTTCACAGGCCTAAGTATTTGGATGCAGCTGTGATCAACACACAGCCGAGTGTTAATTATCAAGGAATTAACTTTGAACAAATGTAG
- Protein Sequence
- MTMQQYCLRWNNHQPNFISVFSSLLNSESLVDVTLAAEGRHLQAHKVVLSACSSYFQSLFTINPCQHPIVILKDVKFTDLKVMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEIPVDQSVSKAQTTSTEKTELLTPGDANWPEGGLRQSLSPSPCPLSPSSKRKRLRKSSTGSGSGSTERTSDELQSGEVTLTSSSGSGINTVIKTDPGGYTSDSSSILQKAKQHSSDSELHRGSSHESIEGEMSHHVTLQVPQEVTVQHNVESAGQDVSGHSSSTSQLTLTGMQWNVMDQNAYAQFTSCTSPTIINSQTFTQCAAPLNQSISPSSPNTQCYQNQITNSPPQIIQKRKRSINPQGDENFIRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPNFRLSIKNRKQENAHSVSGENQPPPSPQNEAPSTEKHEVEQTHPVALINSAFFDGKHVDLGTVLHRPKYLDAAVINTQPSVNYQGINFEQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00852598; iTF_01283526; iTF_01283297; iTF_00752872; iTF_00753092; iTF_01329709; iTF_01329921; iTF_01480246; iTF_01480046; iTF_01410105; iTF_01409880; iTF_00870686; iTF_00870483; iTF_01481024; iTF_01480785; iTF_01568128; iTF_01567748;
- 90% Identity
- iTF_00852598;
- 80% Identity
- iTF_00852598;