Pser021129.1
Basic Information
- Insect
- Pyrochroa serraticornis
- Gene Symbol
- bab2
- Assembly
- GCA_905333025.1
- Location
- HG995154.1:26286813-26289943[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-16 1.9e-13 50.2 0.0 2 42 359 400 358 403 0.95
Sequence Information
- Coding Sequence
- ATGACAATGCAACAATATTGTTTACGATGGAACAACCATCAACCAAACTTCATTTCCGTATTCTCTAGTCTTCTCAATAGCGAATCGCTAGTTGATGTCACCCTGGCCGCGGAAGGAAGACACCTGCAAGCACACAAAGTTGTACTGTCCGCTTGCAGCTCGTACTTTCAATCACTGTTCACGATAAATCCTTGCCAGCATCCTATTGTGATATTAAAAGATGTCAAGTTTGCCGACTTGAAAGTCATGGTCGATTTTATGTACTACGGCGAAGTCAACGTCTCCCAGGAGCAGCTACCCCACATCCTGAAAACCGCCGAGATGCTTAAAATTAAGGGTTTGGCGGAAATCCCAGTGGACCAGTCGGTATCGAAAGCCCAAAACAGTTCAACTGATAAAGCGGAACTTCTAACACCAGCTGATTCAAACTGGGGATCAGATGGGGGTCCGCGACAATCGTTGTCGCCTTCTCCTTGCCCTCTTTCACCAGGCAGTAAAAGAAAACGATTGAGGAAATCGTCAACAGGTTCCGGATCTGGATCAACAGAACGAACATCAGATGAACATCAATCAGGAGAGGTGACATTGACGTCATCAGTGTTAGGAACTGTGATCAAATCAGACCCAGGAGGTTACGCTTCTGATAGCAGCAGCATACTTCAGAGAAGTAAACAGCACAGTAGCGATTCAGAACTACACAGGGGGAGTTCGCATGAAAGCGTTGAAGCAGACATAACACATCAAGTTACACTGCAAGTTCCACAAGATGTTAGTGTTCAACATAGTTTAGAAGCTACCGGATCCGTGGAAGTAGCGGGGCCGTCAACGAGTACATCACAGTTAACATTAACTGGCATGCAGTGGAACGTAATGGATCAGACCGCGTACGCCCAATTCACTTCGTGCACTTCCCCAACAACGACCATCCCAAACACTCCAATTTTTACCCAATGTCCCGTTAATGTAACCCAATGTAACCCTCCGTCAACCAATACTCAAAACTATCAAAACCAAATCAACAATTCACCCCCGCAAATGATCCAGAAACGTAAAAGGAGCATCAATCCGCAAGGCGACGAAAACTTCATAAGAGCGCTAGAAGCTGTGAGATTCGGGGGAATAGGGTTCTGTAAAGCCGCTAGAATGTACGGAGTTAATAATCGTACTTTGTGGTTGGAGTATAAGAAACGGGGATATCCCAATTTTAGACTGAGCATTAAGAACAGGAAGCAAGAGAACGCTCAACAGGTCGAGGCTGCACAACCGGCGGCGAACCCGCAAATCGAACAAGTTGAAAAACAGGAACCGGAACCCGCGATGTGTGCTCCAAATCATCCGGTTGCTTTGATCAGTAGCGCATTTTTTGACGGCAAACATGTTGATTTAGGAACGATGTTGCAAAGGCCGAAATATCTTGATGCTGCCATTATTAACACTCAACATGGGGTCAATTTTCAGGGCATTAATTTCGAGCAAATGTAA
- Protein Sequence
- MTMQQYCLRWNNHQPNFISVFSSLLNSESLVDVTLAAEGRHLQAHKVVLSACSSYFQSLFTINPCQHPIVILKDVKFADLKVMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEIPVDQSVSKAQNSSTDKAELLTPADSNWGSDGGPRQSLSPSPCPLSPGSKRKRLRKSSTGSGSGSTERTSDEHQSGEVTLTSSVLGTVIKSDPGGYASDSSSILQRSKQHSSDSELHRGSSHESVEADITHQVTLQVPQDVSVQHSLEATGSVEVAGPSTSTSQLTLTGMQWNVMDQTAYAQFTSCTSPTTTIPNTPIFTQCPVNVTQCNPPSTNTQNYQNQINNSPPQMIQKRKRSINPQGDENFIRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPNFRLSIKNRKQENAQQVEAAQPAANPQIEQVEKQEPEPAMCAPNHPVALISSAFFDGKHVDLGTMLQRPKYLDAAIINTQHGVNFQGINFEQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00852954;
- 90% Identity
- iTF_01283526;
- 80% Identity
- iTF_01283526;