Hten002345.1
Basic Information
- Insect
- Hydropsyche tenuis
- Gene Symbol
- retn
- Assembly
- GCA_009617725.1
- Location
- VTON01000071.1:806120-818485[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-19 4.6e-16 59.0 0.0 17 89 17 87 7 87 0.92
Sequence Information
- Coding Sequence
- ATGTCGGATCGGTACGTTTTACTTTGTAAATGcgtcaaattatataattgCACACCAATCAACCGTCTACCGATAATGGCCAAATCTGTACTGGATCTGTTCGAACTGTACAACTTGGTTATTGCCAGAGGAGGACTGGTCGATGTCATCAACAAGAAACTGTGGCAGGAGATCATCAAAGGACTTCATCTGCCTTCAAGCATCACTTCAGCTGCATTCACGTTACGTACACAgTACATGAAGTATCTGTATCCGTACGAATGTGAAAAGAAAAACCTGTCGACCCCTTCAGAGTTACAAGCCGCTATTGATGGAAATCGACGGGAAGGTAGACGTTCGTCATATGGTCAGTATGAACAACAAGTGCAGTCTCATCTCAATATGaGGAGTCCAGTACCTACAAGCATGCAACAGCTATCGCAGCAAATGTCCCCCTTATCGTTGGTTACTGGCGGTGCTAGAGGACTCGCTGGAGGATTGGGAGCAGGGTTGGGTGGAGGATTGTCTCTGGGTAACAGTTTAGGACTACATCATGCAGCAGCACAGCAAGCAGCACACCACGGCGCACATGCTATGGCTCATGATTTAGAACAGAAAATGATGGAATATATGAAACTATTCCAACAACAGAAGGAATTCAGAAGACcgggtTCCGAATCACCACCGGGAACAGTTTCACCGAGGGATGCAGCTCTTAGCGCATTAGAAATGTCTCGTTTGACTTTATGGagtttatataacaataattctTCTCCGCCGGCATCAATGAACAATGCCACATCTCCAATCAATGAACCTCAGAgGGAGGCTTTGAATCTTAGTGAGTCACCGGTGCAAGGTGTGCCGGTGACGGGTGCTTGCATAAAAAGGGAGTTGACTGAAAGAGAACCTCCTCCTCCAGCTAAAAGGGCGACACCTTTACCTCCTTCAGTTCATTCACCGACACCATCACCGGCACCGCCTGCTTTGATACCTGCACATTTATCTCACCATCATAGTAATGGACATGGAGCcgctttcaaaataacaaGTAGAGgTGATGCAAGGACGGGTGATCAACAGTTAGTGGTATCAATGGAACTGAATGGTGTCACATATGAAGGTGTGCTCTTTGCAAATTCTCAAAATGATACGTCGAGCCCTCCGAGTCAACGACATAGACCGATGGTGTCTTAG
- Protein Sequence
- MSDRYVLLCKCVKLYNCTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPSELQAAIDGNRREGRRSSYGQYEQQVQSHLNMRSPVPTSMQQLSQQMSPLSLVTGGARGLAGGLGAGLGGGLSLGNSLGLHHAAAQQAAHHGAHAMAHDLEQKMMEYMKLFQQQKEFRRPGSESPPGTVSPRDAALSALEMSRLTLWSLYNNNSSPPASMNNATSPINEPQREALNLSESPVQGVPVTGACIKRELTEREPPPPAKRATPLPPSVHSPTPSPAPPALIPAHLSHHHSNGHGAAFKITSRGDARTGDQQLVVSMELNGVTYEGVLFANSQNDTSSPPSQRHRPMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00814889; iTF_00157834; iTF_00799058; iTF_00800786; iTF_00799992;
- 90% Identity
- iTF_00814889; iTF_00157834;
- 80% Identity
- -