Hbet014116.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- retn
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020000089.1:4484793-4491271[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-20 8.7e-16 62.0 0.0 15 89 16 88 2 88 0.90
Sequence Information
- Coding Sequence
- ATGAGCCGTTTCTCGAAATCGATCGTATGCACTTACGAGAAGAAAGCTTCAGgcaCACCAATCAACCGTCTACCGATAATGGCCAAATCTGTGCTGGATCTGTTCGAACTGTACAACTTGGTTATTGCCAGAGGAGGACTGGTTGATGTCATCAACAAGAAACTGTGGCAGGAGATCATCAAAGGACTTCATCTGCCTTCAAGCATCACTTCGGCTGCATTCACATTACGTACACAGTACATGAAGTATCTGTATCCGTATGAATGTGAAAAGAAAAACTTGTCGACCCCTTCAGAGTTACAAGCCGCTATTGATGGAAATCGACGCGAAGGTAGACGTTCGTCATATGGCCAGTATGAACAACAAGTGCAGTCTCATCTCAATATGAGGAGTCCAGTACCTACGAGCATGCAACAACTATCGCAGCAAATGTCTCCCTTATCGTTGGTTACTGGCGGTGCTAGAGGACTCACTGGAGGATTGGGAGCAGGGTTAGGTGGAGGATTGTCTCTGGGAAACAGTTTAGGACTTCATCATGCAGCAGCGCAGCAAGCAGCACACCACGGTGCACATGCCATGGCTCATGATTTAGAACAGAAAATGATGGAATATATGAAACTATTCCAACAACAAAAGGAATTCAGAAGACCAGGTTCCGAATCACCGCCAGGAACAGTTTCACCGAGGGATGCAGCTCTTAGCGCTTTAGAAATGTCTCGTTTGACTTTAtggagtttatataataataattcttctCCGCCGGCATCAATGAACAATGCCACATCTCCAATCAATGAACCTCAGAGGGAGGCTTTAAATCTAAGTGAGTCACCGGTGCAAGGTGTGCCGGTGACGGGTGCTTGCATAAAAAGGGAGTTGACTGAAAGAGAACCTCCTCCTCCAGCCAAAAGGGCGACACCTTTACCTCCTTCAGTTCAttcaccaacaccaccaccggcaccgccttCTTTGATACCTGCACATTTATCTCACCATCATAGTAATGGACATGGAGCCGCTTTCAAAATAACAAGTAGAGgtgATGCAAGGACAGGTGATCAACAGTTGGTAGTATCAATGGAATTGAATGGTGTCACCTATGAAGGCGTACTCTTTGCGAATTCTCAAAATGATACGTCGAGCCCTCCGAGTCAACGACATAGACCGATGGTGTCTTAG
- Protein Sequence
- MSRFSKSIVCTYEKKASGTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPSELQAAIDGNRREGRRSSYGQYEQQVQSHLNMRSPVPTSMQQLSQQMSPLSLVTGGARGLTGGLGAGLGGGLSLGNSLGLHHAAAQQAAHHGAHAMAHDLEQKMMEYMKLFQQQKEFRRPGSESPPGTVSPRDAALSALEMSRLTLWSLYNNNSSPPASMNNATSPINEPQREALNLSESPVQGVPVTGACIKRELTEREPPPPAKRATPLPPSVHSPTPPPAPPSLIPAHLSHHHSNGHGAAFKITSRGDARTGDQQLVVSMELNGVTYEGVLFANSQNDTSSPPSQRHRPMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815601;
- 90% Identity
- iTF_00815601;
- 80% Identity
- -