Hano015187.1
Basic Information
- Insect
- Himalopsyche anomala
- Gene Symbol
- retn_1
- Assembly
- GCA_031772345.1
- Location
- CM062838.1:11593077-11610607[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-19 4.3e-16 59.3 0.0 17 89 8 78 1 78 0.92
Sequence Information
- Coding Sequence
- ATGCGTTTGTCTCAAGATGTTCGGACGCCCATCAACCGACTGCCAATCATGGCCAAGTCCGTGCTGGACTTATTCGAGTTGTACAACTTGGTCATCGCAAGGGGCGGACTCGTCGATGTCATCAACAAGAAACTCTGGCAGGAGATCATCAAGGGTCTGCATCTGCCCTCCAGCATCACTTCAGCTGCTTTCACCCTGAGAACacaATACATGAAATATCTCTATCCATATGAGTGCGAGAAGAAGAATCTGTCTACTCCATCTGAACTTCAGGCAGCTATTGATGGCAACAGACGCGAGGGACGTAGGTCTTCATATGGACAATATGAACAGCAAGTTCAATCTCAACTAAATATGagtcaATTCCAGCCGTCAGTTCAACGCAGTCCAGTCCCATCGAGCATGCACCAGCTGTCCCAGCAGATGTCACCGCTTTCTCTGGTGACAGGAAACACAAGAGGCTTAGCTGGTGGCCTCGGAGGAGGTATGGGTGGAGGCGGTCTCAGTGGAATCCCACTCGGCCTTCATCATGCAGCAGCCCAGCAAGCGGCTGCTGCAGCTGCTCATCATGGAGCACATGCTATGGCGCACGACTTAGAGCAAAAGATGATGGAATATATGAAGCTGTTCCAACAGAAAGATTTTAGGAGACCAGGTTCCGAATCTCCACCAGGCGCAGTTTCCCCTCGAGAAGCAGCACTGAGCGCATTGGAGATGTCTCGCTTGACCCTTTGGAGTCTGTACAACAATAACACTTCCCCGCCCGCCTCCATCAACAACACATCATCGCCAGTAAATGAACCACAAAGGGAAGCGCTGAACCTGAGTGAGTCTCCCATCCACACCGGAGGGATCTGCGTGAAACGTGAGTTAACCGAGAGGGAGCCTCCGCCACCAGCCAAGAGAGCCACACCTCATCCTCCGACAACACCGAATTCCAATCAAATCCCGATGCCTGTTCCTATGCCTGCTCTCACACCGCCCCACACTGACCATCAACAGCAGAGTCAGCAGCATCATAATGTTCATCAGCACTCAAATGGACTTGGAGCGGCTTTCAAGATCACCAGTCGAgGGGATGCCAGAACAGGTGATCAGCAGCTAGTCGTATCCATGGAGCTTAACGGAGTCACATACGAAGGTGTCCTCTTTGCCAACCAGCAGAATAGCACATCAACTCCACCGAATCAGCGGCACAGACCCATGGTGTCTTAG
- Protein Sequence
- MRLSQDVRTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPSELQAAIDGNRREGRRSSYGQYEQQVQSQLNMSQFQPSVQRSPVPSSMHQLSQQMSPLSLVTGNTRGLAGGLGGGMGGGGLSGIPLGLHHAAAQQAAAAAAHHGAHAMAHDLEQKMMEYMKLFQQKDFRRPGSESPPGAVSPREAALSALEMSRLTLWSLYNNNTSPPASINNTSSPVNEPQREALNLSESPIHTGGICVKRELTEREPPPPAKRATPHPPTTPNSNQIPMPVPMPALTPPHTDHQQQSQQHHNVHQHSNGLGAAFKITSRGDARTGDQQLVVSMELNGVTYEGVLFANQQNSTSTPPNQRHRPMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815601;
- 90% Identity
- iTF_00800786; iTF_00799992;
- 80% Identity
- -