Hjap002631.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- retn
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000578.1:1325786-1339638[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-19 3.4e-16 59.8 0.0 17 89 49 119 38 119 0.95
Sequence Information
- Coding Sequence
- ATGGTTACCCTACGCAAATGTATGAAACATTTCAGCGAATTTCAATCACCGCTTAATGAATTGCATTTTCGTACTGTTTGTACGCGTCGTAAACGGACGTCGACCCCACCATTGAGAAGCCATGCCCTCGGCCCATTGATCGCCGGGACACCTATCAACCGATTGCCAATCATGGCAAAGTCTGTTCTGGACCTATTCGAGTTGTACAATTTGGTGATCGCAAGAGGCGGACTCGTCGACGTCATCAACAAGAAACTATGGCAAGAGATCATCAAAGGTCTGCATCTTCCCTCCAGTATCACATCAGCAGCTTTCACATTGAGGACACAATACATGAAATATCTCTATCCATACGAATGCGAGAAGAAGAATCTATCCACTCCATCGGAACTTCAGGCAGCTATTGATGGCAACAGGCGTGAAGGGCGTAGATCTTCATACGGGCAATATGAACAGCAAGTTCAATCACAATTGAACATGAGTCAATTCCAGCCTTCAGTACAGCGCAGTCCAGTCCCATCGAGCATGCACCAGCTTTCACAGCAAATGTCTCCACTGTCGTTGGTGACTGGAAACACAAGAGGCTTAGCCGGAGGCCTCGGAGGAGGTATGGGCGGAGGTGGTCTCAGTGGAATCCCACTCGGTCTTCATCATGCTGCTGCTCAGCAAGCGGCTGCAGCTGCAGCTCATCATGGAGCACATGCCATGGCGCACGACTTAGAGCAGAAGATGATGGAATATATGAAGCTATTCCAGCAGAAAGATTTCAGAAGGCCAGGTTCAGAATCTCCACCTGGTGCAGTATCCCCCAGAGAAGCGGCACTGAGTGCATTGGAGATGTCCCGCTTAACCCTTTGGAGCCTATACAACAATAACACTTCCCCGCCTGCTTCAATCAATAACACATCATCACCAGTCAATGAGCCACAAAGGGAAGCGCTGAACCTGAGCGAGTCTCCCATCCACACCGGAGGGATCTGCGTGAAGCGGGAGTTGACAGAGAGGGAGCCACCACCGCCAGCCAAGAGGGCCACACCTCATCCTCCGACAACACCAAATTCCAATCAAATCACGATGCCCGTTCCTATGCCTGCTCTCACACCGCCACATACTGACCATCAACAGCAGAGTCAGCATCATAATGCTCATCAACACTCGAATGGACTCGGAGCAGCTTTCAAAATCACCAGTCGAGGAGATGCCAGAACAGGAGACCAGCAGCTAGTCGTATCGATGGAACTTAACGGAGTCACATACGAAGGTGTCCTCTTCGCCAACCAGCAGAATAGCACATCAACTCCTCCGAATCAGCGGCACAGACCCATGGTGTCTTAG
- Protein Sequence
- MVTLRKCMKHFSEFQSPLNELHFRTVCTRRKRTSTPPLRSHALGPLIAGTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPSELQAAIDGNRREGRRSSYGQYEQQVQSQLNMSQFQPSVQRSPVPSSMHQLSQQMSPLSLVTGNTRGLAGGLGGGMGGGGLSGIPLGLHHAAAQQAAAAAAHHGAHAMAHDLEQKMMEYMKLFQQKDFRRPGSESPPGAVSPREAALSALEMSRLTLWSLYNNNTSPPASINNTSSPVNEPQREALNLSESPIHTGGICVKRELTEREPPPPAKRATPHPPTTPNSNQITMPVPMPALTPPHTDHQQQSQHHNAHQHSNGLGAAFKITSRGDARTGDQQLVVSMELNGVTYEGVLFANQQNSTSTPPNQRHRPMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815601;
- 90% Identity
- iTF_00799058;
- 80% Identity
- -