Agra007003.1
Basic Information
- Insect
- Arctopsyche grandis
- Gene Symbol
- retn_1
- Assembly
- GCA_029955255.1
- Location
- JARCGT010000016.1:4317356-4332502[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-19 1.1e-15 58.4 0.0 18 89 34 103 23 103 0.93
Sequence Information
- Coding Sequence
- ATGCGAGAAACGTCTCGAGAACACAATGTGAAGAACGATAGGGAAACGAGAAGAGAGTTATCGACAACTAAGCTTTTCTTCAACggaacatatgcatgtACCCCGATTAACCGTTTGCCGATAATGGCCAAGTCTGTGCTGGACCTGTTCGAATTGTACAACCTGGTGATAGCCCGCGGTGGTCTTGTCGACGTCATCAATAAGAAGTTGTGGCAAGAAATCATCAAGGGATTGCACCTACCTTCGAGCATTACTTCTGCAGCTTTCACATTACGTACACAATATATGAAGTATCTGTATCCGTATGAGTGCGAGAAGAAGAATCTTTCAACGCCGTCAGAACTTCAGGCAGCAATTGACGGCAATCGTCGTGAAGGCAGACGTTCTTCCTACGGTCAATACGAACAACAAGTGCAATCACATTTAAACATGAGGAGTCCTGTTCCGACGAGTATGCAACAGTTGTCGCAGCAGATGTCACCGCTGTCTTTAGTCACCGGTGGCGCCAGAGGACTTTCCGGAGGCTTGGGAGGTGGACTCGGTGGAGGCTTAGCTCTAGGAAACAGCTTGGGTATGCATCACGCAGCAGCACAACAAGCGGCGCATCACGGAGCGCATGCCATGGCCCACGATCTGGAACAAAAAATGATGGAATACATGAAATTGTTCCAACAGAAAGACTTCAGAAGGCCAGGTTCAGAATCACCGCCAGGCACAGTGTCCCCACGCGATGCAGCTCTCAGTGCTTTGGAAATGTCCCGCTTAACCTTGTGGagtctatataataataatgcatcTCCTCCAGCATCTCTGAACAATGCATCATCTCCAATAAATGAACCTCAAAGGGAAGCTTTGAACCTTAGCGAGTCACCGGTGCAGGCTGCGCCGGTGACAGGCGTCTGCATAAAACGGGAATTACCTGAACGAGAACCACCTCCTCCGGCCAAGAGAGCCACACCTTTACCACCCTCAGCACATTCACCGACACCACCACCAGCACCACCTGCTCTAATACCGGCACATTTGTCTCACCATCACAGCAATGGTCACGGTGCAGCTTTCAAAATCACAAGTAGGGGTGATGCAAGGACTGGTGATCAGCAGTTAGTGGTTTCAATGGAATTAAACGGAGTAACATATGAAGGAGTCCTATTTGCAAATCCTCAAAATGACACTTCCAGTCCTCCAAGTCAACGGCACAGACCGATGGTATCTTAG
- Protein Sequence
- MRETSREHNVKNDRETRRELSTTKLFFNGTYACTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPSELQAAIDGNRREGRRSSYGQYEQQVQSHLNMRSPVPTSMQQLSQQMSPLSLVTGGARGLSGGLGGGLGGGLALGNSLGMHHAAAQQAAHHGAHAMAHDLEQKMMEYMKLFQQKDFRRPGSESPPGTVSPRDAALSALEMSRLTLWSLYNNNASPPASLNNASSPINEPQREALNLSESPVQAAPVTGVCIKRELPEREPPPPAKRATPLPPSAHSPTPPPAPPALIPAHLSHHHSNGHGAAFKITSRGDARTGDQQLVVSMELNGVTYEGVLFANPQNDTSSPPSQRHRPMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815601;
- 90% Identity
- iTF_00815601;
- 80% Identity
- -