Hhel000776.1
Basic Information
- Insect
- Helleia helle
- Gene Symbol
- nfxl1
- Assembly
- GCA_963853865.1
- Location
- OY971414.1:10772075-10774549[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1 3.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.0063 2.1e+02 2.9 0.5 4 10 169 175 168 176 0.97 3 20 1.4e-07 0.0046 17.8 16.1 3 19 186 202 185 202 0.95 4 20 0.0093 3.1e+02 2.4 2.1 1 9 227 234 227 234 0.92 5 20 1.2e-08 0.00041 21.2 12.6 1 18 237 254 237 255 0.93 6 20 2.8e-08 0.00095 20.0 9.3 1 19 290 308 290 308 0.99 7 20 4.4e-07 0.015 16.2 18.0 3 19 345 361 337 361 0.86 8 20 4.3e-05 1.4 9.8 19.0 1 18 395 412 395 413 0.97 9 20 1.8e-09 5.9e-05 23.9 17.1 1 19 422 440 422 440 0.99 10 20 0.001 34 5.5 9.3 10 19 489 498 479 498 0.87 11 20 0.0063 2.1e+02 2.9 4.9 4 12 510 518 508 518 0.90 12 20 0.16 5.2e+03 -1.5 3.5 14 18 547 551 547 552 0.87 13 20 0.28 9.4e+03 -2.4 0.1 8 11 568 571 567 572 0.81 14 20 0.0035 1.2e+02 3.7 10.5 1 11 588 598 582 599 0.91 15 20 0.32 1.1e+04 -2.5 0.9 15 18 613 616 612 617 0.85 16 20 0.00041 14 6.7 17.0 4 18 630 645 628 646 0.86 17 20 1 3.3e+04 -6.5 3.4 9 13 652 656 652 656 0.71 18 20 0.03 1e+03 0.8 2.0 8 16 674 682 673 683 0.86 19 20 3.6e-06 0.12 13.3 11.9 1 16 687 701 687 707 0.86 20 20 1 3.3e+04 -4.6 1.1 6 10 737 741 737 741 0.89
Sequence Information
- Coding Sequence
- ATGGCTTCAAGATATCGTGATGCTGCTGCTAAATTGCAGCAGAACGTGGAAAAACATTTGCAAGTAATCAAAGATTTATCTTCTTCTGAGGATGATGAGCCTTTTGAACCGAATGTGCTAGAAGGAATGTTCCAAAATTACTGCAAGGGTGGAGGAGACCGATTAATGTTAAATCGAACTAAGAATCTTGTAGAAGAAGCTATAAGTGGAAAATCTGTTACATGCTTAATATGTATAGGATCTATGAAAAGAGCTGATGCAATTTGGACTTGTGACAATTGTTTTTCGTACTTTCATCTTTCCTGTATCCAAAAGTGGAGCAATGATAGTATAACCTTGCGGAGTGAAGAAGTACAGGCACCAATTGCCGtgtttaaacaaaaaaagatagAATGGTGTTGTCCTAAATGTAGATATTCCTTTACCAAAGATGAAATACCTCGTAAATATCGTTGTTTCTGTGGCAAAACAGATGATCCACCATTTCATCCATGGTTGCTACCGCATACTTGTGGAGAAGTTTGTAGCAAAAGTCTTTCAAAAAGTAGTAATTGTAAACATAAATGTTTAGTGTTATGTCACCCGGGACCTTGCCCACCATGCCCTCAAACAGTTAATGGTGTTTGCTTTTGTGGGAAAGAAAACAAAAGAGTGAGATGCACTGCTTCAAAATGGTCCTGCGGACATGAATGTCAGAAATTACTGCAATGTAATTCtcataaatgtgaaaatatttgTCATGTTGGTGAATGCCCTCCCTGTAATTATACTAGCTTGCAGTCATGTCAATGTGGGGCTGAAAAGGAGAAGCGGCCATGTAATGATTTAGTTTGGCATTGTAATAAAAAGTGTGGTAAACGGTTTTCATGTGGGTATCATATATGTGAGAAAATTTGTCATTTTGGGGAGTGTGGAAATTGCCCCCATTCTGGGCTAATGTCATGTCCATGTGGAGCAAATGAGCGCTACATTCAATGCCCAGATACAATAGAGACATGTGTTAGCACATGTGGGAAGAAACAAGACAATTGTGAACATAGTTGTCCTGAAAAATGTCATAAAGGCCCATGTCCACCATGTCAAGTTTTGGTAGAAAAGAGATGTCTCTGCACATCACATATTCGTTCATTGCCCTGTAGTAAAGATTTTAAATGTGATACTAAATGTAGAGGTGTTAGACCATGTGGGAAACATGGATGTGGCCGAAAATGCTGTAGTGGAATCTGTCCACCTTGTGAAAAAATTTGTGACAAACCACTTCAATGTGGTCGTCACAAATGCACTTCTGTTTGTCATCATGGTCCATGCTATCCCTGTCCAAGAGATTCTAAAGTCACTTGTCGCTGCAAAGAAACCTACATTACAGTACCATGTGGAAGAGAAAGGCACACAAAACCACCTAAATGCAATCTtccatgtaaaataaaatacaagtgTGGAcataaagaagaaaataaacataattgtCATTTTGGTGATTGCCCTCCCTGTAAAGCTATATGTAACAAAGCTTATGATAAATGTGATCATAACTGTTTAGCAGTATGTCATGAATATGTCCTGGCTACTTTTAAACAAGTTGAAAAACCTGCTTATCCTTGGGAAGCACAACTGCCAAAAACTAAAATTGTTAAATTAGATTGTCCCCCATGTGAAGCACCCGTTCCAGTAACATGCTTTGGGGAACATGAAACTGAAAATCGGCCATGCCATTTAGCAATACGAAGACCATGTGGTCGAGAATGTGGGAAACAACTACCTTGTTGTAATCATAATTGTTCTcaactttgtcatttatatcAACCAGACCCCGACCATCCCAATGTGCCTTATTTATGTAAACCCTGTAACAAAGAGTGCCTAGTCAGCCGTCCTGTGAAATGTACCCATAAATGTGTAAAGCAAGGTTGTCATCCTGGGCCATGCCCCCCATGTAATATTCTTGAGAAAATACCATGTCACTGTGGTGTTACTGAGGTATATTTACGTTGTTTTGAGTTAGCCACAGTTACTGAGGAGACTTTATGCTGCAAACAACAATGCcccaaaaatcttaaatgtggACATAGATGTAAAAATCTATGTCACTCAGGTGTATGTGGACAAAATCAAGAATGCACTAAGAAAACCAAAGTACATTGCCCTTGTGGAAATTTAAAGAAAGATGCTCCATGTACTGCTGTAAGAAAATCTGAGGTAAAGGTCGCTTGTGATCAGACATGTGAAGATAAAAAGATTGCAGCTAAGATTGAAAAGGAAAACGTGGAAAAACGAAGAAGAGAATtggaagaagaaaaaaatcgtAAAGAATTAGCGGAATATGAATGGAAACTAAGCGGGAAGAAAAAGAAGTACAAGGAGAAGAAGGTAGTTATAAACACGGATCATAGAAATTGGTTACAAAAGTATTGGGTTCCTATTTTATCTGTTATTATATCTGCTGTAGCAGCTATttactacatattttatatttaa
- Protein Sequence
- MASRYRDAAAKLQQNVEKHLQVIKDLSSSEDDEPFEPNVLEGMFQNYCKGGGDRLMLNRTKNLVEEAISGKSVTCLICIGSMKRADAIWTCDNCFSYFHLSCIQKWSNDSITLRSEEVQAPIAVFKQKKIEWCCPKCRYSFTKDEIPRKYRCFCGKTDDPPFHPWLLPHTCGEVCSKSLSKSSNCKHKCLVLCHPGPCPPCPQTVNGVCFCGKENKRVRCTASKWSCGHECQKLLQCNSHKCENICHVGECPPCNYTSLQSCQCGAEKEKRPCNDLVWHCNKKCGKRFSCGYHICEKICHFGECGNCPHSGLMSCPCGANERYIQCPDTIETCVSTCGKKQDNCEHSCPEKCHKGPCPPCQVLVEKRCLCTSHIRSLPCSKDFKCDTKCRGVRPCGKHGCGRKCCSGICPPCEKICDKPLQCGRHKCTSVCHHGPCYPCPRDSKVTCRCKETYITVPCGRERHTKPPKCNLPCKIKYKCGHKEENKHNCHFGDCPPCKAICNKAYDKCDHNCLAVCHEYVLATFKQVEKPAYPWEAQLPKTKIVKLDCPPCEAPVPVTCFGEHETENRPCHLAIRRPCGRECGKQLPCCNHNCSQLCHLYQPDPDHPNVPYLCKPCNKECLVSRPVKCTHKCVKQGCHPGPCPPCNILEKIPCHCGVTEVYLRCFELATVTEETLCCKQQCPKNLKCGHRCKNLCHSGVCGQNQECTKKTKVHCPCGNLKKDAPCTAVRKSEVKVACDQTCEDKKIAAKIEKENVEKRRRELEEEKNRKELAEYEWKLSGKKKKYKEKKVVINTDHRNWLQKYWVPILSVIISAVAAIYYIFYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00934419; iTF_00404373; iTF_00289307; iTF_01248773; iTF_01218022; iTF_00164938; iTF_00406396; iTF_00745308;
- 90% Identity
- -
- 80% Identity
- -