Ctho007617.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyclargus thomasi
Gene Symbol
nfxl1
Assembly
GCA_026546445.1
Location
JAOTAV010000019.1:489498-491975[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.013 1.4e+02 2.9 0.5 4 10 169 175 168 176 0.97
3 20 1e-07 0.0012 19.2 15.5 3 19 186 202 185 202 0.96
4 20 7.2e-09 8.2e-05 22.9 12.6 1 18 237 254 237 255 0.93
5 20 0.12 1.4e+03 -0.2 1.2 1 10 264 273 264 273 0.86
6 20 4.7e-09 5.4e-05 23.5 11.5 1 19 290 308 290 308 0.99
7 20 2.2e-06 0.025 15.0 17.4 3 19 345 361 337 361 0.86
8 20 1.2 1.4e+04 -3.4 0.4 7 11 365 369 365 369 0.84
9 20 2 2.3e+04 -5.3 2.2 5 10 384 389 384 389 0.88
10 20 2.4e-05 0.27 11.6 20.2 1 18 395 412 395 413 0.97
11 20 2e-10 2.2e-06 27.9 14.2 1 19 422 440 422 440 0.99
12 20 0.00048 5.4 7.5 6.4 10 19 489 498 486 498 0.92
13 20 0.0002 2.3 8.7 6.8 1 12 508 518 508 518 0.96
14 20 0.37 4.2e+03 -1.8 3.3 14 18 547 551 547 552 0.85
15 20 0.2 2.3e+03 -0.9 0.1 8 12 568 572 567 573 0.82
16 20 3.7e-06 0.042 14.2 5.1 1 11 588 598 588 599 0.98
17 20 1.7 1.9e+04 -3.9 1.7 15 18 613 616 613 617 0.87
18 20 0.0016 18 5.8 19.4 3 19 629 646 628 646 0.82
19 20 2 2.3e+04 -6.5 3.4 9 13 652 656 652 656 0.71
20 20 2.3e-06 0.026 14.9 12.7 1 16 687 701 687 707 0.86

Sequence Information

Coding Sequence
ATGGCACGACGATATCGTGATGCCGCTGCCCAACTGCAGCAGAGTGTTCAAAAACATTTACAAATTACCAAAGATTTATCTTCATCAGAAGACGATGAGCCATTTGAACCTAATGTCCTGGAAGGTATGTTTCAAAACTATTGCAAGGGTGGAGGAGATAACCTGCTGCTAAATCGTACCAAAATACTGCTTGAAGAAGCTTCAAATGGAAAGTCTATAACTTGCTTGATATGTATTGGATCTATAAAACGATTGGATGCTATTTGGACTTGCAAACACTGTTACGCTTACTTCCATTTATCTTGTATTCAAAAGTGGGGTAATGATTGTGTCAGCCTAAGAAGTGAAGAAGTTCAGGCCCCAATTGCTGTCTACAAGCAAAAGAAAGTAGAATGGTGTTGCCCCAAGTGCAGACATTCATATACGAAAGAAGAAATTCCTCGCAAGTACCGGTGTTTCTGCGGCAGGACAGATGACCCTCAATATCACCCATGGTTGCTGCCTCACACATGTGGTGAAGTTTGCAGTAAGAGTCTCTCTTTGACTAGTAATTGTAATCACAAGTGCCTATTGTTATGTCATCCTGGGCCATGTCCCCCATGCCCTCAAACTGTGAATGGCCTTTGTTACTGCGAAAAAGAAAAGAAAAAAGTAAGATGCAGTGCTTCCAAATGGTGCTGTGGCAGCCAGTGTAAGAAAATATTACAATGTAATTCACACAGATGCGAAAATATTTGCCACGAAGGTGATTGTCCTCCATGCAATTACATAAGTGAACAGTCCTGCCAATGCGGCTCCCATAAAGAAAAAAGGCCTTGTAATGACTTAGTTTGGCACTGTAAAAAGAAATGTGGAAGGGAATTTTCATGTGGTTATCATAAATGTGAAAGAATTTGCCATTATGGCGAGTGTGGAAATTGTCCAAATTCAGGTGTGATGACATGCCCTTGTGGAGCCAATGAGCGTTATATTGAATGTCCAGACACAATAGAAACATGTGTCAGTACATGTGGTAAGAAAAAAGAGGGTTGTGAACATGCTTGTCCTGAAAAATGTCATAAGGGTGATTGTCCACCATGTCAAGTTTTGGTGGAGAAGAAGTGTCACTGCTCCACACATACTCGCTCTTTACCATGTAATAAGGACTTTAAATGTGAAACTAAATGTAGAGGCATTCGACTTTGTGGGAAACATGGTTGTGGACGCAAGTGCTGCAGTGGAAACTGTCCACCATGTGAAAAAATTTGTGACAAGCCACTTCAATGTGGCCGACATAAGTGTACATCGGTCTGTCATCGTGGACCATGTTACCCATGCCCTAGAGATTCCAAAGTTACTTGCCGTTGTAAAGAAACCTATGTTACAGTACCATGTGGCAGAGAAAGACACACAAAACCACCTAAATGCAGTCTTTTATGCAAAACTAAATACAAATGTGGACATGTTGAGGAAAACAAACATAATTGCCATTTTGGAGAATGCCCACCCTGCAAAGCAATATGTGATAAAGTTTATGATAAATGTGGTCATAATTGCAAAGCAGTGTGTCATGAATATGTGTTAGCTACATTTAAACAGATAGAAAAACCAGCAACTCCCTGGGAGGCTCAACCCCCAAAAACAAAGATAGTGAAATTGGAATGTCCTCCATGTGAAACGCTTGTATTGGTCACATGCTTTGGTGAGCATGAAACTGATAATCAACCATGTCATTCTGCAACAAGAAGGCCCTGTGGTCGGGACTGTGGAAAACCATTAGAATGTGGAAATCACAACTGCATGCAGTTATGTCATTTGTATCAAAATGATCCTGATTATCCAAATGTGCCTTATTTTTGCAAACCTTGCGATAAAGAGTGCTTAGCCAACCGTCCAGATAAGTGTACACATAAATGCCCTAAACAAGGATGTCATCCTGGACCTTGTCCACCTTGCAAAGTTCTAGAAAGGATTCCTTGTCACTGTGGTGTTACTGAGAATTATTTACGTTGTTTTGAGCTATTGACTGTAACCGAGGAAACTCTTAGCTGTAAACAGCAGTGTCCAAAAAATCTAGAATGTGGTCATAGGTGCAAAAATCTTTGTCACAGTGGAAAATGTGGACAGAATCAAGAGTGTACCAAAAAGACTAAGGTGATTTGTCCTTGTGGAAATTTGAAGAAAGATGCACATTGTAATGTGGTGAGGAAGTCAGAATTCAAAATTATATGTGATCAAACCTGTGAGGACAAGAAGTTTGCAGCCTTAATAGAAAGGGAAAAGGAAGAGAAAAGGTTAAGGGAATTGGAAGAAGAGAGGAATCGCAAAGAGTTGGCGGAATATGAGTGGAAACTTAGTGGAAAGAAAAAAAAATATAAAGAAAAAAGGGTGCTGGTACAGACTGATGACAGAAACATCATACAAAAACATTGGGTTCCTATTGTTTCTATAATGATAACAATAATTGTAGCGGTATACTACATATTCTATGTTCAATGA
Protein Sequence
MARRYRDAAAQLQQSVQKHLQITKDLSSSEDDEPFEPNVLEGMFQNYCKGGGDNLLLNRTKILLEEASNGKSITCLICIGSIKRLDAIWTCKHCYAYFHLSCIQKWGNDCVSLRSEEVQAPIAVYKQKKVEWCCPKCRHSYTKEEIPRKYRCFCGRTDDPQYHPWLLPHTCGEVCSKSLSLTSNCNHKCLLLCHPGPCPPCPQTVNGLCYCEKEKKKVRCSASKWCCGSQCKKILQCNSHRCENICHEGDCPPCNYISEQSCQCGSHKEKRPCNDLVWHCKKKCGREFSCGYHKCERICHYGECGNCPNSGVMTCPCGANERYIECPDTIETCVSTCGKKKEGCEHACPEKCHKGDCPPCQVLVEKKCHCSTHTRSLPCNKDFKCETKCRGIRLCGKHGCGRKCCSGNCPPCEKICDKPLQCGRHKCTSVCHRGPCYPCPRDSKVTCRCKETYVTVPCGRERHTKPPKCSLLCKTKYKCGHVEENKHNCHFGECPPCKAICDKVYDKCGHNCKAVCHEYVLATFKQIEKPATPWEAQPPKTKIVKLECPPCETLVLVTCFGEHETDNQPCHSATRRPCGRDCGKPLECGNHNCMQLCHLYQNDPDYPNVPYFCKPCDKECLANRPDKCTHKCPKQGCHPGPCPPCKVLERIPCHCGVTENYLRCFELLTVTEETLSCKQQCPKNLECGHRCKNLCHSGKCGQNQECTKKTKVICPCGNLKKDAHCNVVRKSEFKIICDQTCEDKKFAALIEREKEEKRLRELEEERNRKELAEYEWKLSGKKKKYKEKRVLVQTDDRNIIQKHWVPIVSIMITIIVAVYYIFYVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00787306;
90% Identity
iTF_00745308;
80% Identity
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