Gale004145.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glaucopsyche alexis
Gene Symbol
nfxl1
Assembly
GCA_905404095.1
Location
FR990043.1:24882411-24884885[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1 4.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.0052 2.1e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 19 1.6e-07 0.0063 17.6 15.9 3 19 186 202 185 202 0.95
4 19 3.2e-08 0.0013 19.8 11.1 1 18 237 254 237 255 0.93
5 19 3.1e-10 1.3e-05 26.3 9.7 1 19 290 308 290 308 0.99
6 19 7.7e-07 0.031 15.4 17.7 3 19 345 361 337 361 0.86
7 19 0.62 2.5e+04 -3.4 0.4 7 11 365 369 365 369 0.84
8 19 1 4.1e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 19 1.2e-05 0.48 11.6 20.2 1 18 395 412 395 413 0.97
10 19 9.8e-11 4e-06 27.9 14.2 1 19 422 440 422 440 0.99
11 19 0.00041 17 6.7 4.8 10 19 489 498 486 498 0.92
12 19 0.0001 4.1 8.7 6.8 1 12 508 518 508 518 0.96
13 19 0.19 7.6e+03 -1.8 3.3 14 18 547 551 547 552 0.85
14 19 1 4.1e+04 -5.0 1.6 9 11 569 571 567 571 0.56
15 19 2e-06 0.08 14.1 5.5 1 11 588 598 588 599 0.98
16 19 0.32 1.3e+04 -2.5 0.9 15 18 613 616 612 617 0.85
17 19 0.00011 4.6 8.5 18.0 3 19 629 646 628 646 0.91
18 19 1 4.1e+04 -6.5 3.4 9 13 652 656 652 656 0.71
19 19 6.1e-06 0.25 12.6 15.2 1 16 687 701 687 707 0.86

Sequence Information

Coding Sequence
ATGGCACGAAGATATCGCGACGCCGCTGCTAAATTACAGCAAAGTGTTCAAAAACATTTACAAGTTACAAAAGATTTATCTTCATCCGAAGATGACGAGCCATTTGAGCCCAATGTTCTGGAAGGAATGGTTCAAAATTATTGCAAGGGCGGCGGAGATAACCTTATGTTGAATCGTACCAAAATCCTCCTTGAAGAAGCTTCTAGTGGAAAATCTATAACATGCTTGATATGTATTGGATCTATAAAACGATCAGACGCTATTTGGACCTGCAACCACTGTTTTGCTTACTTTCATCTATCTTGTattcaaaagtggggcaatGATAGTGTTACTTTGAGAAGTGAAGAAGTTCAGGCTCCAATTGCTGTTTATAAGCAAAAGAAGATAGAATGGTGCTGTCCAAAGTGCAGACATTCATATTCTAAAGAAGAAATACCTCGTAAGTACCGTTGTTTCTGTGGAAAAACAGATGACCCCCAATATCACCCATGGTTACTGCCTCATACATGTGGTGAAGTTTGTGGTAAGAGTTTATCATTAACTAATAATTGTAAACACAAGTGCCTATTGTTATGTCACCCCGGTCCATGCCCCCCTTGCCCTCAAACTGTTAATGGCCTTTGTTATtgtgaaaaagaaaataaaagagTAAGATGCAGTGCTTCCAAATGGTCCTGCGGCAGTCAGTGTAAGAAAATATTGCAATGTAATTCACACagatgtgaaaatatttgtcatgAAGGTGCTTGCTCTCCATGTAATTACACAAGCGAGCAACCCTGCCAATGCGGCATTGAGAAGGAAAAAAGGCCTTGTAATGACTTAGTATGGCACTGTAAAAAGAAATGTGGAAGACAATTTTCATGTGGCTATCATAAGTGTGAAAGAATTTGCCATTTTGGTGACTGTGGAAGCTGTCCCAATTCAGGTGTCATGACATGCCCATGTGGAGCTAATGAGCGTTATATACAATGTCCAGACACAATTGAAACATGTGTCAGTACTTGTGGAAAGAAGAAAGAAGGCTGTGAACATAGTTGTCCAGAGAAATGTCATAAGGGTGATTGTCCACCATGTCAAGTATTAGTGGAAAAAAAATGTCACTGCTTAACACATACTCGTTCACTACCATGTAGTAAAGATTTTAAATGCGAAACTAAATGCAGAGGAATAAGGCCATGTGGGAAACATGGATGTGGACGTAAGTGCTGCAGTGGAAACTGTCCACCTTGTGAAAAAATTTGTGACAAGCCACTTCAGTGTGGCCGTCATAAGTGTACTTCGGTTTGTCATCGTGGACCATGTTATCCATGTCCTAGAGATTCCAAAGTTACCTGTCGTTGTAAAGGAACCTATGTAACAGTACCATGCGGTAGAGAAAGACACACAAAACCCCCTAAATGCAGCCTTTTGTGCAAAATGAAATATAAGTGTGGACACATTGAGGAAAACAAACATAATTGCCATTTTGGTGAATGTCCTTCTTGCAAAGCAATTTGTGAtaaagtttatgataaatgtggTCATAATTGCAAAGCAGTGTGTCATGAATATGTTTTGGCTACATTTAAACAGATAGAAAAACCAGCAACTCCCTGGGAAGCTCAACCTCCAAAAACAAAGATTGTTAAATTGGAATGTCCCCCATGTGAAATGCCTGTACCAGTGACATGCTTTGGTGAACATGAAACTGAAAATCACCCATGCCATTTGGCAACAAGAAGACCTTGTGGCCGGGAATGTGGAAAACCATTGGAATGTGGTAATCATAACTGCATACAGTTGTGTcatctttatcaaaataatcCAGATTATCCAAATGTGCCTTATTTATGCAAACCTTGCAATAAAGAGTGCTCAATCAACCGTCCAGAAAAATGTACACACAAATGCCCAAAGCTTGGATGTCATCCTGGACCATGTCCTCCTTGCAAAGTTCTGGAAAAGATTCCTTGTCACTGTGGTGTCACAGAGATTTATTTACGTTGTTTCGAGTTATCTACTGTAACTGAAGAGACTCTCAGCTGTAAACAGCAGTGCCCAAAAAATCTTGAATGTGGTCACAGGTGCAAAAATCTATGCCACAAAGGAAAATGTGGACACAATCAAGAGTGCACCAAAAAGACTAAGGTGTTATGTCCCTGTGGCAATTTGAAGAAAGATGCACCTTGTAATGCAGTAAGAAAGTCAGAATTCAAAATAATTTGTGATCAAACTTGCGAGGACAAAAAACTAGCAGCCATTATTGAAAAGGAAAAGGAGGAAAGAAGATTAAGAGATTTAGAAGAAGAAAGGAATCGCAAAGAGTTAGCAGAATATGAATGGAAACTAAGTGGGAAGAAAAAGAAGTATAAAGAGAAAAAGGTATTGGTGCAGATAGATGACAGAACAATCATTCAAAAATATTGGGTTCCTATTGTTTCTATAATGATAACTTCAATTGTAGCTGTGTACtatgtattatatgtttaa
Protein Sequence
MARRYRDAAAKLQQSVQKHLQVTKDLSSSEDDEPFEPNVLEGMVQNYCKGGGDNLMLNRTKILLEEASSGKSITCLICIGSIKRSDAIWTCNHCFAYFHLSCIQKWGNDSVTLRSEEVQAPIAVYKQKKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDDPQYHPWLLPHTCGEVCGKSLSLTNNCKHKCLLLCHPGPCPPCPQTVNGLCYCEKENKRVRCSASKWSCGSQCKKILQCNSHRCENICHEGACSPCNYTSEQPCQCGIEKEKRPCNDLVWHCKKKCGRQFSCGYHKCERICHFGDCGSCPNSGVMTCPCGANERYIQCPDTIETCVSTCGKKKEGCEHSCPEKCHKGDCPPCQVLVEKKCHCLTHTRSLPCSKDFKCETKCRGIRPCGKHGCGRKCCSGNCPPCEKICDKPLQCGRHKCTSVCHRGPCYPCPRDSKVTCRCKGTYVTVPCGRERHTKPPKCSLLCKMKYKCGHIEENKHNCHFGECPSCKAICDKVYDKCGHNCKAVCHEYVLATFKQIEKPATPWEAQPPKTKIVKLECPPCEMPVPVTCFGEHETENHPCHLATRRPCGRECGKPLECGNHNCIQLCHLYQNNPDYPNVPYLCKPCNKECSINRPEKCTHKCPKLGCHPGPCPPCKVLEKIPCHCGVTEIYLRCFELSTVTEETLSCKQQCPKNLECGHRCKNLCHKGKCGHNQECTKKTKVLCPCGNLKKDAPCNAVRKSEFKIICDQTCEDKKLAAIIEKEKEERRLRDLEEERNRKELAEYEWKLSGKKKKYKEKKVLVQIDDRTIIQKYWVPIVSIMITSIVAVYYVLYV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00787306;
90% Identity
iTF_01218022; iTF_00289307; iTF_00404373; iTF_00164938; iTF_00934419; iTF_00406396; iTF_01248773;
80% Identity
-