Csei004390.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- nfxl1
- Assembly
- GCA_905187585.1
- Location
- LR994546.1:18894524-18897001[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 2.5e+04 -7.8 5.6 15 19 135 139 134 139 0.81 2 19 0.0031 76 3.9 0.8 4 13 170 179 169 180 0.86 3 19 5.2e-08 0.0013 19.2 15.5 3 19 187 203 186 203 0.96 4 19 1.7e-08 0.00041 20.8 11.4 1 18 238 255 238 256 0.93 5 19 0.68 1.7e+04 -3.6 1.2 6 10 281 285 280 285 0.91 6 19 1.1e-09 2.8e-05 24.5 10.7 1 19 291 309 291 309 0.99 7 19 2.8e-07 0.0069 16.8 17.6 3 19 346 362 338 362 0.86 8 19 1 2.5e+04 -5.3 2.2 5 10 385 390 385 390 0.88 9 19 1.2e-05 0.3 11.6 20.2 1 18 396 413 396 414 0.97 10 19 9.8e-11 2.4e-06 27.9 14.2 1 19 423 441 423 441 0.99 11 19 0.00024 5.9 7.5 6.4 10 19 490 499 487 499 0.92 12 19 0.0001 2.5 8.7 6.8 1 12 509 519 509 519 0.96 13 19 0.19 4.6e+03 -1.8 3.3 14 18 548 552 548 553 0.85 14 19 0.1 2.5e+03 -0.9 0.1 8 12 569 573 568 574 0.82 15 19 1.9e-06 0.046 14.2 5.1 1 11 589 599 589 600 0.98 16 19 0.85 2.1e+04 -3.9 1.7 15 18 614 617 614 618 0.87 17 19 0.00079 20 5.8 19.4 3 19 630 647 629 647 0.82 18 19 1 2.5e+04 -6.5 3.4 9 13 653 657 653 657 0.71 19 19 1.2e-06 0.029 14.9 12.7 1 16 688 702 688 708 0.86
Sequence Information
- Coding Sequence
- ATGGCAAGACGATATCGCGATGCCGCTGCTAAACTACAACAGAGTGTCCAAAAACACTTACAAGTTACTAAAGATTTATCTTCTTCCGAAGACGATGAGCCGTTCGAACCTAATGTCCTGGAAGGAATGTTTCAAAACTATTGCAAGGGCGGAGGAGATAACCTTATGCTGAATCGTACCAAAATTCTACTAGAAGAAGCTTCAAGTGGAAAATCTATAACTTGCTTGATATGCATTGGATCTATAAAACGATCGGACGCTATTTGGACTTGCGACCATTGTTTTGCTTACTTTCATCTATCTTGTATTCAAAAGTGGGCCAACGATAGCGTCAGCTTGAGAAGTGAAGAAGTTCAGGCCCCAATTATTGCCGTATATAAGCAAAAAAAGATAGAATGGTGTTGCCCCAAATGCAGACATTCGTATTCTAAAGAAGAAATTCCTCGAAAGTACCGGTGTTTCTGCGGCAGGACAGATGACCCTCAATATCATCCATGGTTGCTGCCTCACACATGTGGTGAAGTTTGTGGTAAGGGTCTATCTTTAACTAGTAATTGTAATCACAAGTGCCTATTGCTATGCCACCCGGGGCCGTGTCCCCCCTGCCCTCAAACTGTGAATGGCCTTTGTTTCTGTGAAAAAGAAAAGAAAAGAGTAAGATGCAGTGCTTCCAAATGGTCCTGCGGTAGTCAGTGTAAGAAAATATTAAAATGTAATTCACACAGATGTGAGAATATTTGTCATGAAGGTGATTGTTCTCCATGCAATTACACAAGCGAACAGTCCTGCCAATGCGGCAGCCAGAAAGAAAAAAGGCCTTGTAACGACTTAGTTTGGCACTGTGAAAAGAAATGTGGAAGAGAATTTTCATGTGGTTATCATAAATGTGAAAAAATTTGTCATTTTGGCGAGTGTGGAAGCTGTCCAAATTCAGGTGTGATGACATGTCCATGTGGAGCCAATGAGCGTTATATTGAGTGTCCCGACACAATTGAAACATGTGTCAGTACTTGTGGTAAGAAAAAAGAAGGTTGTGAGCATACTTGTCCTGAAAAATGTCACAGGGGTGATTGTCCACCATGTCAAGTTTTGGTGGAGAAGATGTGTCACTGCTCAACACATATTCGTTCGTTACCATGCAGTAAGGACTTTAAATGTGAAACTAAATGTAGGGGCATCAGATTATGTGGGAAACATGGATGTGGACGCAAGTGCTGCAGTGGAAACTGTCCACCATGTGAGAAAATTTGTGACAAGCCACTTCAATGTGGCCGACATAAGTGTACATCTGTCTGTCACCGTGGACCATGTTATCCATGTCCTAGAGATTCCAAAGTTACTTGCCGTTGTAAAGAAACCTACATAACAGTACCATGTGGTAGAGAAAGATACACAAAACCACCCAAATGCAACCTTTTGTGCAAAATGAAATACAAATGTGGACATGTTGAGGAAAACAAACATAATTGCCATTTTGGTGAATGTCCACCTTGCAAAGCAATTTGTGAAAAAGTTTATGATAAATGTGGCCATAATTGCAAAGCGGTATGTCACGAATATGTTTTGGCTACATTTAAGCAGATAGAAAAACCAGCAACTCCTTGGGAGGCTCAACCTCCAAAAACAAAGATTGTGAAATTAGAATGTCCTCCATGTGAAACACCCGTACCAGTCACATGCTTTGGTGAACACGAAACTGATAATCAACCATGTCATTCAGCTACAAGAAGACCCTGTGGCCGGGAATGCGGAAAACCATTAGAATGTGGTAATCACAACTGCATGCAGTTGTGCCATTTGTATCAAAATGATCATAATTATCCAAATGTGCCTTATTTTTGCAAACCTTGCGATAAAGAGTGCTCAGTGAACCGTCCAGAAATGTGTACACACAAATGCCCCAAACAAGGATGTCATCCCGGACCGTGTCCACCTTGCAAAGTTCTAGAAAAGATTCCTTGTCACTGCGGTGTTACTGAGAATTATTTACGTTGTTTCGAGCTATTGACAGTAACTGAGGAGACTCTCAGCTGCAAACAGCAGTGCCCAAAAAATCTAGAATGTGGTCATAGGTGCAAAAATCTATGTCACAGCGGTAAATGTGGACAGAATCAAGAATGTACCAAAAAGACTAAGGTGGTTTGTCCATGTGGCAATTTAAAGAAAGATGCACCTTGTAATGTGGTGAGAAAGTCAGAATTCAAAGTTGTTTGTGATCAAACCTGCGAGGACAAAAAGTTAGCAGCCATAATAGAAAGGGAAAAGGAAGAGAAAAGGTTAAGGGAATTAGAAGAAGAAAGGAATCGCAAAGAGTTAGCAGAATATGAGTGGAAACTAAGTGGGAAGAAAAAGAAGTATAAAGAGAAAAAGGTGCTGGTGCAGACCAATGACAGAAACATCATACAAAAATATTGGGTTCCTATTATTTCTATAATGATCACAATAACTGTAGCTGTATACTACATATTCTATGTTTAA
- Protein Sequence
- MARRYRDAAAKLQQSVQKHLQVTKDLSSSEDDEPFEPNVLEGMFQNYCKGGGDNLMLNRTKILLEEASSGKSITCLICIGSIKRSDAIWTCDHCFAYFHLSCIQKWANDSVSLRSEEVQAPIIAVYKQKKIEWCCPKCRHSYSKEEIPRKYRCFCGRTDDPQYHPWLLPHTCGEVCGKGLSLTSNCNHKCLLLCHPGPCPPCPQTVNGLCFCEKEKKRVRCSASKWSCGSQCKKILKCNSHRCENICHEGDCSPCNYTSEQSCQCGSQKEKRPCNDLVWHCEKKCGREFSCGYHKCEKICHFGECGSCPNSGVMTCPCGANERYIECPDTIETCVSTCGKKKEGCEHTCPEKCHRGDCPPCQVLVEKMCHCSTHIRSLPCSKDFKCETKCRGIRLCGKHGCGRKCCSGNCPPCEKICDKPLQCGRHKCTSVCHRGPCYPCPRDSKVTCRCKETYITVPCGRERYTKPPKCNLLCKMKYKCGHVEENKHNCHFGECPPCKAICEKVYDKCGHNCKAVCHEYVLATFKQIEKPATPWEAQPPKTKIVKLECPPCETPVPVTCFGEHETDNQPCHSATRRPCGRECGKPLECGNHNCMQLCHLYQNDHNYPNVPYFCKPCDKECSVNRPEMCTHKCPKQGCHPGPCPPCKVLEKIPCHCGVTENYLRCFELLTVTEETLSCKQQCPKNLECGHRCKNLCHSGKCGQNQECTKKTKVVCPCGNLKKDAPCNVVRKSEFKVVCDQTCEDKKLAAIIEREKEEKRLRELEEERNRKELAEYEWKLSGKKKKYKEKKVLVQTNDRNIIQKYWVPIISIMITITVAVYYIFYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00787306;
- 90% Identity
- iTF_00745308;
- 80% Identity
- -