Hpel009804.1
Basic Information
- Insect
- Heliothis peltigera
- Gene Symbol
- ZIPIC
- Assembly
- GCA_958496145.1
- Location
- OY292333.1:272420-273583[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.1 1.2e+03 0.1 0.3 16 30 65 79 61 85 0.91 2 7 1e-06 0.012 16.1 0.3 9 51 85 128 80 130 0.88 3 7 0.0011 13 6.4 0.1 21 44 158 181 153 190 0.85 4 7 0.00041 4.8 7.8 0.1 26 47 219 240 213 247 0.90 5 7 0.13 1.5e+03 -0.3 0.0 26 53 247 274 238 275 0.79 6 7 0.00012 1.4 9.4 0.3 6 48 280 322 275 326 0.95 7 7 0.57 6.7e+03 -2.3 0.0 4 16 373 385 370 386 0.80
Sequence Information
- Coding Sequence
- ATGATGTCGCATGTTATAGCAGATCTACACGACTGCGAGCCGAAGCTTGAAGTGAAGAGCGAAGCCGCCAACAGTGACGATGAACATCTTTACGTAGAAGACGAAGATATTCCACTTAAACAAATTAAGCTAGAGCAATTGCAAACTGCCGACCCTAAGCTAATCTCCCCCAAACGTAGATCCTACACATTAAGATCGAGATGTAAGGATATGCAAGCATATTCATGTGCAGTCTGTGGCCGACAATTTGCTAATCCCTCTACATATAAGGTACACATGAGATCCCATACTAATGAGAAACCATATGCTTGTCCTTCGTGTGAAAAGAAATACAAGGACAGCAGTGCATTGAAACGGCATATAGATAATGTTCATGTACAGAAGACAAGAGAGCGAGACTTTATTTGTGAACACTGTGGTAAAGCTTTCTTTGGGAAAGCTGATGTTATTATTCATATGCGTACACACACTGGAGAGACACCATACAAATGTACAATCTGTGCTGCTAAGTTCACACAAATCAGTGCATTACTAAGACATAAAAGAAGGCACACTGGTGAGAAGAACCATCTGTGCACGGCTTGTCCAAAGAGATTTTGTACCAAAGAAGAACTGAAGAATCACCTCTTGGTGCATAGCAACGTGAAAACATTCTCCTGCTCATTGTGTAATGCCCAGTtcaagtacaaaaataatttgaggAAACATATGAGGCTACACTCTGAATCcaataaatttgtatgtagTTATTGTGGACGTACTTTCAATCTTAAGGGAAACCTAAAGATCCACATTGATTCACAACACTCTGAGAAGTCTGGCCACTGTAACATTTGTACAAAACATGTTCCCAACCTGGAGATGCACATGTGGAGGCACACAGGGCAGCgtcctctcaagtgtgagctCTGTGAGAGCAGCTTTTTTGAACACAAGGCTTTGGCCAGACATATGAACTTTAAACATACTAaaactgataaatataaatgtgaatTTGAAGGGTGCAACCTGACTTACCCATCTAAACCGATGCTGGACTTCCATATTGCCAAAGTGCACAGTACCCACATCCCATTCCCTTGTGATAGGTGCTCAAGAGCATTCTACAGGAAGAATGATCTTGCCAGACATAAAATTGGTACTCATAAAGAGAGGCTTAGTTAA
- Protein Sequence
- MMSHVIADLHDCEPKLEVKSEAANSDDEHLYVEDEDIPLKQIKLEQLQTADPKLISPKRRSYTLRSRCKDMQAYSCAVCGRQFANPSTYKVHMRSHTNEKPYACPSCEKKYKDSSALKRHIDNVHVQKTRERDFICEHCGKAFFGKADVIIHMRTHTGETPYKCTICAAKFTQISALLRHKRRHTGEKNHLCTACPKRFCTKEELKNHLLVHSNVKTFSCSLCNAQFKYKNNLRKHMRLHSESNKFVCSYCGRTFNLKGNLKIHIDSQHSEKSGHCNICTKHVPNLEMHMWRHTGQRPLKCELCESSFFEHKALARHMNFKHTKTDKYKCEFEGCNLTYPSKPMLDFHIAKVHSTHIPFPCDRCSRAFYRKNDLARHKIGTHKERLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00785396; iTF_00784615; iTF_00783763; iTF_00784055; iTF_00784861; iTF_00786200; iTF_00786435;
- 90% Identity
- iTF_00785396;
- 80% Identity
- iTF_00785396;