Basic Information

Insect: Heliconius sara
Gene Symbol: -
Assembly: GCA_917862395.2
Location: OU860796.2:17958361-17963859[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.023 1.7 9.7 1.0 1 23 88 111 88 111 0.95

2 27 1.3 97 4.1 0.1 2 23 138 160 137 160 0.93

3 27 0.072 5.3 8.1 3.2 2 23 183 204 182 204 0.97

4 27 0.39 29 5.8 1.0 1 17 208 224 208 230 0.86

5 27 0.058 4.3 8.4 0.6 1 23 235 258 235 258 0.96

6 27 1.4 1e+02 4.1 6.5 1 23 265 288 265 288 0.95

7 27 0.0042 0.31 12.0 1.0 2 23 296 318 295 318 0.96

8 27 0.0019 0.14 13.0 2.1 1 23 324 346 324 346 0.95

9 27 0.00021 0.015 16.1 2.0 1 23 352 375 352 375 0.98

10 27 0.23 17 6.5 0.2 3 23 442 463 440 463 0.93

11 27 0.075 5.6 8.0 0.2 2 23 489 511 488 511 0.93

12 27 0.11 8.3 7.5 0.4 2 23 534 555 533 555 0.96

13 27 0.00048 0.036 14.9 0.7 3 23 561 581 559 581 0.96

14 27 3.2e-06 0.00024 21.8 0.9 1 23 586 609 586 609 0.98

15 27 2.4 1.8e+02 3.3 0.3 2 23 617 639 616 639 0.83

16 27 0.00018 0.013 16.3 0.6 2 23 647 669 646 669 0.96

17 27 8.3e-06 0.00062 20.5 1.5 1 23 675 697 675 697 0.98

18 27 3.3e-05 0.0024 18.6 4.1 1 23 703 725 703 725 0.99

19 27 0.00027 0.02 15.8 2.7 1 23 731 754 731 754 0.97

20 27 0.0051 0.38 11.7 0.9 1 23 818 841 818 841 0.94

21 27 1.1 83 4.4 0.1 2 23 868 890 867 890 0.92

22 27 0.23 17 6.5 0.2 5 23 916 934 912 934 0.90

23 27 0.47 35 5.5 0.0 1 21 938 958 938 960 0.88

24 27 0.1 7.4 7.7 1.5 1 19 965 983 965 988 0.84

25 27 0.0012 0.086 13.8 0.9 2 23 1026 1048 1025 1048 0.95

26 27 0.01 0.76 10.8 3.9 1 23 1054 1076 1054 1076 0.97

27 27 0.0017 0.12 13.2 2.0 1 23 1082 1105 1082 1105 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.023	1.7	9.7	1.0	1	23	88	111	88	111	0.95
2	27	1.3	97	4.1	0.1	2	23	138	160	137	160	0.93
3	27	0.072	5.3	8.1	3.2	2	23	183	204	182	204	0.97
4	27	0.39	29	5.8	1.0	1	17	208	224	208	230	0.86
5	27	0.058	4.3	8.4	0.6	1	23	235	258	235	258	0.96
6	27	1.4	1e+02	4.1	6.5	1	23	265	288	265	288	0.95
7	27	0.0042	0.31	12.0	1.0	2	23	296	318	295	318	0.96
8	27	0.0019	0.14	13.0	2.1	1	23	324	346	324	346	0.95
9	27	0.00021	0.015	16.1	2.0	1	23	352	375	352	375	0.98
10	27	0.23	17	6.5	0.2	3	23	442	463	440	463	0.93
11	27	0.075	5.6	8.0	0.2	2	23	489	511	488	511	0.93
12	27	0.11	8.3	7.5	0.4	2	23	534	555	533	555	0.96
13	27	0.00048	0.036	14.9	0.7	3	23	561	581	559	581	0.96
14	27	3.2e-06	0.00024	21.8	0.9	1	23	586	609	586	609	0.98
15	27	2.4	1.8e+02	3.3	0.3	2	23	617	639	616	639	0.83
16	27	0.00018	0.013	16.3	0.6	2	23	647	669	646	669	0.96
17	27	8.3e-06	0.00062	20.5	1.5	1	23	675	697	675	697	0.98
18	27	3.3e-05	0.0024	18.6	4.1	1	23	703	725	703	725	0.99
19	27	0.00027	0.02	15.8	2.7	1	23	731	754	731	754	0.97
20	27	0.0051	0.38	11.7	0.9	1	23	818	841	818	841	0.94
21	27	1.1	83	4.4	0.1	2	23	868	890	867	890	0.92
22	27	0.23	17	6.5	0.2	5	23	916	934	912	934	0.90
23	27	0.47	35	5.5	0.0	1	21	938	958	938	960	0.88
24	27	0.1	7.4	7.7	1.5	1	19	965	983	965	988	0.84
25	27	0.0012	0.086	13.8	0.9	2	23	1026	1048	1025	1048	0.95
26	27	0.01	0.76	10.8	3.9	1	23	1054	1076	1054	1076	0.97
27	27	0.0017	0.12	13.2	2.0	1	23	1082	1105	1082	1105	0.98

Sequence Information

Coding Sequence: ATGTTTTGTGTGAAGGAAAACGGGGTATATCGGCAActtatagtagtattttttgtagtagtaaATGTTTATGGTAAATCTCAGAAATCATCCAAAGCATCATTGGACACCTCTCAAGAGGAGGAAATGTTTGCTATAAATAAAGAAGACGTAGTTCCTAAAGCTAGGCAAGGAGAACATTTGGAAAAACATAGGAACAATATAAGGGAAGTTATTCTTTGCTCGAACGCTACGCCGATTAGGTGTCGAGGCGGCATTGGTTATGCGTGTTGTTTTTGTTCCAGTCAGTTTCCTGATCCTGCAGACTTAAAGAAACATACGATAAAAGATCATGACGATAAGACAAAAGCAATATTTATGAAAGGGCGGGATATGTACGGATACTTAGTTAAATTAGATATTACAGGATTAGAATGTAATCTATGTGGATTAAGGCTGGAGACTCTAGAGAAAATTTTGGAGCACTTAAAATACGCTCATAGTAAGAATATCAGCACAGAGATACCTAACCATATTTTGccttttaaatttgataatgaGTATTTAAGGTGCTTCATGTGTCAgaatattttcaacaaatttaAAGCCCTCCAAGAACACATGCATACACATTACCGAAATTATATTTGCAAAGTCTGTGACGCTGGATTTGTTAACCGCCATCTTCTATTATGTCACAATGAGGGCCATAAAACTGGTACCTTTGTATGTGAACAATGCGACCTAGTTTTTGACACAGttagaaaaaagaaattgcACGAACGAAAAATCCATAATGGCTTAAACATGCCTCACAAATGTGGATACTGCAGTGAGAGGTTTAGGGAGAATTGTCACAAAAATGAACACTTAGCGAAAGTACATGGTGTTGTTGGACCAACAATTAAATGTCAAGCTTGCGACAAGACATTTACATTGCAGCAGACTTGGTTACTGCACATGAAAAAGTATCATTTGCTGCAGAAGAAACATGATTGCACGAGATGCGATATGGCCTTTTTTTCTAAACGGGAGTTAACAGACCACATGGTCAAACACACGGGAACAAGGGAGTTCAAATGTGAAGTTTGCAAGAAATCATATGGCAGATTAAAGACATTAAAAGAACACGTGAAGAGGCAACACCCAGAAGATTATTTCTATAAATgtatACGAACCATTAAAATCGAAAGGCGTTCAACACCTCGAGTCGAGTTGAAGATCATTCGGGGCACCAGGGAACCTAAACTATCGGATGCCAggaaaaaccaacaaaatctTATGACTATTTTGCTTTGTTCCAATGCCAATCCTATTAGATCGAAGGATAGTCTTGGATACGGCTGCGCGTTTTGTCTCGAACAGTTTCAGAATCCGACCGACcttaagaaacattttttagtagAACATAACAACGACAGATTAATTCAGTACATGACGTCCAGATTATTTGAACATGTCGTTAAATTAGATATTACCTACTTAAACTGTTCCCTTTGCAGCATTAGTGTAGCAAATTTGGAGGATTTGATGCATCACTTAAAGGATGAGCATAAACAAGAAATACACACAGATATAAATAACACTATAGTGCCGTTTAAATTCGACACTCCAGAACTAAGATGCGCAATTTGTTCCACGGAATATCTAAACTTCAAACTGTTACAGGAGCATATGAACACTCATTTCGGATATCATTTATGTCCATTGTGTAGCCGAGGCTTTATTACTGAGCGCCTTTTAGCCACTCACATCAGAAGACATGACAACGGTGTATACAAATGTCAAGAGTGCGATAAAGTGTTTGGTAATAATGAGAGGTTAAAGGAACATCAGAGACGGATTCATTTAGGTTTCAACAAACGCAACAAATGTATGATATGTGATGAACGTTTCATGGATTACTGGAGGAAGGTCGATCATATGGTCAAAGTGCACGGAGCACCACCGGTAGTCATAAAGTGCCAAGCTTGCGACCGCACGTTTATCAACCAGAGGGCTCTGGCGCGGCACACTAAAAAAGACCACCTTATGGAAAAAAAGCACCAATGTGAAGAATGTGATATGAGATTCTTTAGCGCTAGCGGATTAAAGCGTCATATGGCGAAGCATACAGGACTGCGCGAGTTCAGATGTGATATTTGCTTCAAATGCTACGGCAGAAAGACTACGTTAAGAGAACATATGCGTATACATGCAGACGACCGCAGGTTTGCCTGTAGTAGATGTGGTCAGGCTTTCGTACAAAAGTGCAGTTGGAAAAGTCACATGAGATCCAAACATGGTGACCAGAAACTAACAATACCAACAAATGTGGGAAGAAAAGACCGAAAAGGTAAAACCATACGAATTACTGTTGAAAAGAAACTAAACATGGTGATTGTGTCAGAGGTGGAGAAACAtcagaataatataaaagaaattcttttgaaTACGAATGCTACGCCAATTCGTTGTAAAGGAGGCATTGGTTATGCGTGTTGCTTCTGCTCTGAGCAGTTTCCTGATCCAAAAGATTTAAAAGCACACACCCAAGAATCTCACAGTGCTGAAGAAAAATCTACATTTATGAAAGGCAAAGACATGCACGGCTATTTCGTTAAACTGGATATCACAGACGTTAAATGCCAAATTTGTGGGGAAACCATGGAAAGTGTAGAGAAAGTAGTCAACCATCTGCAAATGAATCACGATAAGAAACTATACACGGATATTAAGGATCACATACTACCCTTTAAATTTGGCAATGGACCTCTCAACTGTATTATATGTTTGAACGTATTTAACTCTTTCAAAGCTCTTCAAGAACACATGAATGTTCATTATAGTAACTATATATGTCTAGTCTGCGGCGCGGGTTTCGTTAATAAAAACATCCTTCTAAGACACGGAGATGCCCACAAAATAGGAACGTTTACCTGCGAAATATGTTCCAGAACCTTCGATACGGCGCGGAAAAAGCGATTGCATGATCGATCAAGACACGCCGGGATAAAATTGCCTCATAAATGTGGTTACTGCATGGAAAGATTTAAAGAAGTTTGGAAGAAACAGGAGCATTTGGTTAAAGTCCATGGAATTAAGAGTCCAGGGATCAAGTGTCAAGCGTGTGACAAGAGTTTCGAAAGCAAACATTCTTGGAGGCTTCATATAGCAAGAGTGCATCTCTTGCAAAGACCACACAAATGTCAGCATTGTGAGATGGAGTTTTATGCTAAGAAGGAGTTGGAGAGCCACATGGTGAAACATACTGGTTCCAGGGAATTTAAGTGTGAATCATGTTTCAAGACTTACGGACGATTAAAGACCTTAAAAGAACATGTCCGAAAAGTACACGTTTGA
Protein Sequence: MFCVKENGVYRQLIVVFFVVVNVYGKSQKSSKASLDTSQEEEMFAINKEDVVPKARQGEHLEKHRNNIREVILCSNATPIRCRGGIGYACCFCSSQFPDPADLKKHTIKDHDDKTKAIFMKGRDMYGYLVKLDITGLECNLCGLRLETLEKILEHLKYAHSKNISTEIPNHILPFKFDNEYLRCFMCQNIFNKFKALQEHMHTHYRNYICKVCDAGFVNRHLLLCHNEGHKTGTFVCEQCDLVFDTVRKKKLHERKIHNGLNMPHKCGYCSERFRENCHKNEHLAKVHGVVGPTIKCQACDKTFTLQQTWLLHMKKYHLLQKKHDCTRCDMAFFSKRELTDHMVKHTGTREFKCEVCKKSYGRLKTLKEHVKRQHPEDYFYKCIRTIKIERRSTPRVELKIIRGTREPKLSDARKNQQNLMTILLCSNANPIRSKDSLGYGCAFCLEQFQNPTDLKKHFLVEHNNDRLIQYMTSRLFEHVVKLDITYLNCSLCSISVANLEDLMHHLKDEHKQEIHTDINNTIVPFKFDTPELRCAICSTEYLNFKLLQEHMNTHFGYHLCPLCSRGFITERLLATHIRRHDNGVYKCQECDKVFGNNERLKEHQRRIHLGFNKRNKCMICDERFMDYWRKVDHMVKVHGAPPVVIKCQACDRTFINQRALARHTKKDHLMEKKHQCEECDMRFFSASGLKRHMAKHTGLREFRCDICFKCYGRKTTLREHMRIHADDRRFACSRCGQAFVQKCSWKSHMRSKHGDQKLTIPTNVGRKDRKGKTIRITVEKKLNMVIVSEVEKHQNNIKEILLNTNATPIRCKGGIGYACCFCSEQFPDPKDLKAHTQESHSAEEKSTFMKGKDMHGYFVKLDITDVKCQICGETMESVEKVVNHLQMNHDKKLYTDIKDHILPFKFGNGPLNCIICLNVFNSFKALQEHMNVHYSNYICLVCGAGFVNKNILLRHGDAHKIGTFTCEICSRTFDTARKKRLHDRSRHAGIKLPHKCGYCMERFKEVWKKQEHLVKVHGIKSPGIKCQACDKSFESKHSWRLHIARVHLLQRPHKCQHCEMEFYAKKELESHMVKHTGSREFKCESCFKTYGRLKTLKEHVRKVHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00775434; iTF_00776175; iTF_00778907; iTF_00782007;
90% Identity: iTF_00782007;
80% Identity: -