Basic Information

Insect: Heliconius hewitsoni
Gene Symbol: -
Assembly: GCA_018230445.1
Location: DWAN01004938.1:2453-7013[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.024 1.9 9.7 1.0 1 23 76 99 76 99 0.95

2 27 2.5 2.1e+02 3.3 0.1 2 23 126 148 125 148 0.90

3 27 0.075 6.2 8.1 3.2 2 23 171 192 170 192 0.97

4 27 0.41 33 5.8 1.0 1 17 196 212 196 218 0.86

5 27 0.061 5 8.4 0.6 1 23 223 246 223 246 0.96

6 27 1.4 1.2e+02 4.1 6.5 1 23 253 276 253 276 0.95

7 27 0.0044 0.37 12.0 1.0 2 23 284 306 283 306 0.96

8 27 0.007 0.57 11.4 2.1 1 23 312 334 312 334 0.95

9 27 0.00021 0.018 16.1 2.0 1 23 340 363 340 363 0.98

10 27 0.24 20 6.5 0.2 3 23 430 451 428 451 0.93

11 27 0.22 18 6.6 0.3 2 23 477 499 476 499 0.93

12 27 0.12 9.6 7.5 0.4 2 23 522 543 521 543 0.96

13 27 0.00051 0.042 15.0 0.7 3 23 549 569 547 569 0.96

14 27 3.3e-06 0.00027 21.8 0.9 1 23 574 597 574 597 0.98

15 27 2.5 2.1e+02 3.3 0.3 2 23 605 627 604 627 0.83

16 27 0.00019 0.016 16.3 0.6 2 23 635 657 634 657 0.96

17 27 8.7e-06 0.00072 20.5 1.5 1 23 663 685 663 685 0.98

18 27 3.4e-05 0.0028 18.6 4.1 1 23 691 713 691 713 0.99

19 27 0.00028 0.023 15.8 2.7 1 23 719 742 719 742 0.97

20 27 0.0053 0.44 11.7 0.9 1 23 806 829 806 829 0.94

21 27 1.2 96 4.4 0.1 2 23 856 878 855 878 0.92

22 27 0.25 20 6.5 0.2 5 23 904 922 900 922 0.90

23 27 0.5 41 5.6 0.0 1 21 926 946 926 948 0.88

24 27 0.11 8.6 7.7 1.5 1 19 953 971 953 976 0.84

25 27 0.0012 0.1 13.8 0.9 2 23 1014 1036 1013 1036 0.95

26 27 0.011 0.88 10.8 3.9 1 23 1042 1064 1042 1064 0.97

27 27 0.0018 0.14 13.3 2.0 1 23 1070 1093 1070 1093 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.024	1.9	9.7	1.0	1	23	76	99	76	99	0.95
2	27	2.5	2.1e+02	3.3	0.1	2	23	126	148	125	148	0.90
3	27	0.075	6.2	8.1	3.2	2	23	171	192	170	192	0.97
4	27	0.41	33	5.8	1.0	1	17	196	212	196	218	0.86
5	27	0.061	5	8.4	0.6	1	23	223	246	223	246	0.96
6	27	1.4	1.2e+02	4.1	6.5	1	23	253	276	253	276	0.95
7	27	0.0044	0.37	12.0	1.0	2	23	284	306	283	306	0.96
8	27	0.007	0.57	11.4	2.1	1	23	312	334	312	334	0.95
9	27	0.00021	0.018	16.1	2.0	1	23	340	363	340	363	0.98
10	27	0.24	20	6.5	0.2	3	23	430	451	428	451	0.93
11	27	0.22	18	6.6	0.3	2	23	477	499	476	499	0.93
12	27	0.12	9.6	7.5	0.4	2	23	522	543	521	543	0.96
13	27	0.00051	0.042	15.0	0.7	3	23	549	569	547	569	0.96
14	27	3.3e-06	0.00027	21.8	0.9	1	23	574	597	574	597	0.98
15	27	2.5	2.1e+02	3.3	0.3	2	23	605	627	604	627	0.83
16	27	0.00019	0.016	16.3	0.6	2	23	635	657	634	657	0.96
17	27	8.7e-06	0.00072	20.5	1.5	1	23	663	685	663	685	0.98
18	27	3.4e-05	0.0028	18.6	4.1	1	23	691	713	691	713	0.99
19	27	0.00028	0.023	15.8	2.7	1	23	719	742	719	742	0.97
20	27	0.0053	0.44	11.7	0.9	1	23	806	829	806	829	0.94
21	27	1.2	96	4.4	0.1	2	23	856	878	855	878	0.92
22	27	0.25	20	6.5	0.2	5	23	904	922	900	922	0.90
23	27	0.5	41	5.6	0.0	1	21	926	946	926	948	0.88
24	27	0.11	8.6	7.7	1.5	1	19	953	971	953	976	0.84
25	27	0.0012	0.1	13.8	0.9	2	23	1014	1036	1013	1036	0.95
26	27	0.011	0.88	10.8	3.9	1	23	1042	1064	1042	1064	0.97
27	27	0.0018	0.14	13.3	2.0	1	23	1070	1093	1070	1093	0.98

Sequence Information

Coding Sequence: ATGGAATTACGAGTTGATATGGCATACGGAACAGACAGTAAATCTCACAAATCATCCAAAGCATCATTGGACACCTCTCCTGAGGATGAAATGtttgctataaataaagaagaCGTAGTTCCTAAAGCTAGGCAAGGAGAACATTTGGAAAAACATAGGAACAATATAAGGGAAGTTATTCTTTGCTCGAACGCTACGCCGATTAGGTGTCGAGGCGGCATTGGTTATGCGTGTTGTTTTTGTTCCAGTCAGTTTCCTGATCCTGCAGACTTAAAGAAGCATACGATAAAAGATCATGACGATAAGACGAAAGCAATATTTATGAAAGGGCGGGATATGTACGGATACTTAGttaaattagatattacaGGATTAGAATGTAATCTATGTGGATTAAAGCTGGAGACTCTAGAGAAAATTTTGGAGCACTTAAAAGACGCTCATAGTAAGAACATCAGCACAGAGGTACCTAACCATATTTTgccttttaaatttgatagtgAGTATTTAAGGTGCTTCATGTGTCagaatattttcaacaaatttAAAGCTCTCCAAGAACACATGCATACACATTACcgaaattatatttgcaaagTCTGTGACGCTGGATTTGTTAACCGCCATCTTTTATTATGTCACAATGAGGGCCATAAAACTGGTACCTTTGTTTGTGAACAATGCGACTTAGTTTTTGACACTGTTAGAAAGAAGAAATTGCACGAAAGAAAAATCCATAATGGCTTTAACATGCCTCACAAATGTGGATACTGCAGTGAGAGGTTTAGGGAGAATTGTCACAAAAATGAACACTTAGCGAAAGTACACGGTGTTGTTGGACCAACAATTAAATGTCAAGCTTGCGACAAGACATTTACATTGCAGCAGACTTGGTTACTGcacatgaaaaaatatcatttgctGCAGAAGAAACATGATTGCACGAGATGCGAAATGGCCTTTTTTTCTAAACGGGAGTTAACAGACCACATGGTCAAACACACGGGAACAAGGGAGTTCAAATGTGAAGTTTGCAAGAAATCGTACGGCAGATTAAAGACATTAAAAGAACACGTCAAGAGGCAACACCCAGaagattatttctataaatgtaTACGAACCATTAAAATCGAAAGGCGTTCAACACCTCGAGTCGAGTTGAAGATCATTCGGGGCACCAGGGAGCCTAAACTATCGGATGCCAGGAAAAACCAACAAAATCTTATGACAATTTTGCTTTGTTCCAATGCCAATCCTATTAGATCGAAGGATAGTCTTGGATACGGCTGCGCGTTTTGTCTCGAACAGTTTCAGAATCCGACCGACcttaagaaacattttttagtaGAACATAACAACGACAGATTAATTCAGTACATGACGTCCAGATTATTTGAACATGTCGTTAAATTAGATATTACCTACTTAAATTGTTCCCTTTGCAGCATTAGTGTAGCAAAATTGGAGGATTTGATGCATCACTTAAAGGATGAGCATAAACAAGAAATACACACAGATATAAATAACACTATAGTACCGTTTAAATTCGACACTCCAGAACTAAGATGCGCAATTTGTTCCACGGAATATCTAAACTTCAAACTGTTACAGGAGCATATGAACACTCATTTCGGATATCATTTATGTCCATTGTGTAGCCGAGGCTTTATTACTGAGCGCCTTTTAGCCACTCACATCAGAAGACATGACAACGGTGTATACAAATGTCAAGAGTGCGATAAAGTGTTTGGTAATAATGAGAGGTTAAAGGAACATCAGAGACGGATTCATTTAGGTTTCAACAAACGCAACAAATGTATGATATGTGATGAACGTTTCATGGattactggaggaaggtcgaTCATATGGTGAAAGTGCACGGAGCACCACCAGTAGTCATAAAGTGCCAAGCTTGCGACCGCACATTTATCAACCAGAGGGCTCTGGCGCGGCACACTAAAAAAGACCACCTTATGGAAAAAAAGCACCAATGTGAAGAATGTGATATGAGATTCTTTAGCGCTAGCGGATTAAAGCGTCATATGGCGAAGCACACAGGACTGCGCGAGTTCAGATGTGATATTTGCTTCAAATGCTACGGCAGAAAGACTACGTTAAGAGAACATATGCGTATACATGCAGACGACCGCAGGTTTGCCTGTAGTAGATGTGGTCAGGCTTTCGTACAAAAGTGCAGTTGGAAGAGTCACATGAGATCCAAACATGGTGACCAGAAACTAACAATTCCAACAAATGTGGGAAGAAAAGACCGAAAAGGTAAAACCATACGAATTACTGTTGAAAAGAAACTAAACATGGTGATAGTGTCAGAGGTGGAAAAACatcagaataatataaaagaaattctttTGAATACGAATGCTACGCCCATTCGTTGTAAGGGAGGCATCGGTTATGCGTGTTGCTTCTGCTCTGAGCAGTTTCCTGATCCAAAAGATTTAAAAGCACACACCCAAGAATCACACAGTGCTGAAGAAAAATCTACATTTATGAAAGGCAAAGACATGCACGGCTATTTCGTTAAACTGGATATCACAGACGTTAAATGCCAAATTTGTGGGGAAACCATGGAAAGTGTAGAGAAAGTAGTCAACCATCTGCAAATGAATCACGATAAGAAACTTTACACGGACATTAAGGATCACATACTACCCTTTAAATTTGGCAATGGACCTCTCAACTGTATTATATGTTTGAACGTATTTAACTCTTTCAAAGCTCTCCAAGAACACATGAATGTTCATTATAGTAACTATATATGTCTAGTCTGCGGCGCGGGTTTCGTTAATAAAAACATCCTTCTAAGACACGGAGATGCCCACAAAATAGGAACGTTTACCTGCGAAATTTGTTCTAGAACCTTCGATACGGCGCGAAAAAAGCGATTGCATGATCGATCAAGACACGCCGGGATAAAATTGCCTCATAAATGTGGTTACTGCATGGAAAGATTTAAAGAAGTTTGGAAGAAACAGGAGCATTTGGTTAAAGTCCATGGAATTAAGAGTCCAGGGATCAAGTGTCAAGCGTGTGACAAGAGTTTCGAAAGCAAACATTCTTGGAGGCTTCATATAGCAAGAGTGCATCTCTTACAAAGACCACACAAATGTCAGCATTGTGAGATGGAGTTTTATGCTAAAAAGGAGTTGGAGAGCCACATGGTGAAACATACTGGTTCCAGGGAATTTAAGTGTGAATCATGTTTCAAGACTTACGGACGATTGAAGACCTTAAAAGAACATGTCCGAAAAGTACACGTTTGA
Protein Sequence: MELRVDMAYGTDSKSHKSSKASLDTSPEDEMFAINKEDVVPKARQGEHLEKHRNNIREVILCSNATPIRCRGGIGYACCFCSSQFPDPADLKKHTIKDHDDKTKAIFMKGRDMYGYLVKLDITGLECNLCGLKLETLEKILEHLKDAHSKNISTEVPNHILPFKFDSEYLRCFMCQNIFNKFKALQEHMHTHYRNYICKVCDAGFVNRHLLLCHNEGHKTGTFVCEQCDLVFDTVRKKKLHERKIHNGFNMPHKCGYCSERFRENCHKNEHLAKVHGVVGPTIKCQACDKTFTLQQTWLLHMKKYHLLQKKHDCTRCEMAFFSKRELTDHMVKHTGTREFKCEVCKKSYGRLKTLKEHVKRQHPEDYFYKCIRTIKIERRSTPRVELKIIRGTREPKLSDARKNQQNLMTILLCSNANPIRSKDSLGYGCAFCLEQFQNPTDLKKHFLVEHNNDRLIQYMTSRLFEHVVKLDITYLNCSLCSISVAKLEDLMHHLKDEHKQEIHTDINNTIVPFKFDTPELRCAICSTEYLNFKLLQEHMNTHFGYHLCPLCSRGFITERLLATHIRRHDNGVYKCQECDKVFGNNERLKEHQRRIHLGFNKRNKCMICDERFMDYWRKVDHMVKVHGAPPVVIKCQACDRTFINQRALARHTKKDHLMEKKHQCEECDMRFFSASGLKRHMAKHTGLREFRCDICFKCYGRKTTLREHMRIHADDRRFACSRCGQAFVQKCSWKSHMRSKHGDQKLTIPTNVGRKDRKGKTIRITVEKKLNMVIVSEVEKHQNNIKEILLNTNATPIRCKGGIGYACCFCSEQFPDPKDLKAHTQESHSAEEKSTFMKGKDMHGYFVKLDITDVKCQICGETMESVEKVVNHLQMNHDKKLYTDIKDHILPFKFGNGPLNCIICLNVFNSFKALQEHMNVHYSNYICLVCGAGFVNKNILLRHGDAHKIGTFTCEICSRTFDTARKKRLHDRSRHAGIKLPHKCGYCMERFKEVWKKQEHLVKVHGIKSPGIKCQACDKSFESKHSWRLHIARVHLLQRPHKCQHCEMEFYAKKELESHMVKHTGSREFKCESCFKTYGRLKTLKEHVRKVHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00782813;
90% Identity: iTF_00782007;
80% Identity: -