Basic Information

Insect: Heliconius congener
Gene Symbol: -
Assembly: GCA_018230605.1
Location: DWAO01000531.1:2448-8184[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.023 2.5 9.7 1.0 1 23 67 90 67 90 0.95

2 27 2.4 2.7e+02 3.3 0.1 2 23 117 139 116 139 0.90

3 27 0.072 8 8.1 3.2 2 23 162 183 161 183 0.97

4 27 0.39 43 5.8 1.0 1 17 187 203 187 209 0.86

5 27 0.058 6.5 8.4 0.6 1 23 214 237 214 237 0.96

6 27 1.4 1.5e+02 4.1 6.5 1 23 244 267 244 267 0.95

7 27 0.0043 0.47 12.0 1.0 2 23 275 297 274 297 0.96

8 27 0.002 0.22 13.1 2.1 1 23 303 325 303 325 0.95

9 27 0.00021 0.023 16.1 2.0 1 23 331 354 331 354 0.98

10 27 0.23 26 6.5 0.2 3 23 421 442 419 442 0.93

11 27 0.21 24 6.7 0.3 2 23 468 490 467 490 0.93

12 27 0.11 13 7.5 0.4 2 23 513 534 512 534 0.96

13 27 0.0017 0.19 13.3 1.2 3 23 540 560 538 560 0.96

14 27 3.2e-06 0.00036 21.8 0.9 1 23 565 588 565 588 0.98

15 27 2.4 2.7e+02 3.3 0.3 2 23 596 618 595 618 0.83

16 27 0.00018 0.02 16.3 0.6 2 23 626 648 625 648 0.96

17 27 8.4e-06 0.00093 20.5 1.5 1 23 654 676 654 676 0.98

18 27 3.3e-05 0.0037 18.7 4.1 1 23 682 704 682 704 0.99

19 27 0.00027 0.03 15.8 2.7 1 23 710 733 710 733 0.97

20 27 0.0051 0.57 11.8 0.9 1 23 797 820 797 820 0.94

21 27 1.1 1.3e+02 4.4 0.1 2 23 847 869 846 869 0.92

22 27 0.24 26 6.5 0.2 5 23 895 913 891 913 0.90

23 27 0.48 53 5.6 0.0 1 21 917 937 917 939 0.88

24 27 0.1 11 7.7 1.5 1 19 944 962 944 967 0.84

25 27 0.0012 0.13 13.8 0.9 2 23 1005 1027 1004 1027 0.95

26 27 0.01 1.1 10.8 3.9 1 23 1033 1055 1033 1055 0.97

27 27 0.0017 0.19 13.3 2.0 1 23 1061 1084 1061 1084 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.023	2.5	9.7	1.0	1	23	67	90	67	90	0.95
2	27	2.4	2.7e+02	3.3	0.1	2	23	117	139	116	139	0.90
3	27	0.072	8	8.1	3.2	2	23	162	183	161	183	0.97
4	27	0.39	43	5.8	1.0	1	17	187	203	187	209	0.86
5	27	0.058	6.5	8.4	0.6	1	23	214	237	214	237	0.96
6	27	1.4	1.5e+02	4.1	6.5	1	23	244	267	244	267	0.95
7	27	0.0043	0.47	12.0	1.0	2	23	275	297	274	297	0.96
8	27	0.002	0.22	13.1	2.1	1	23	303	325	303	325	0.95
9	27	0.00021	0.023	16.1	2.0	1	23	331	354	331	354	0.98
10	27	0.23	26	6.5	0.2	3	23	421	442	419	442	0.93
11	27	0.21	24	6.7	0.3	2	23	468	490	467	490	0.93
12	27	0.11	13	7.5	0.4	2	23	513	534	512	534	0.96
13	27	0.0017	0.19	13.3	1.2	3	23	540	560	538	560	0.96
14	27	3.2e-06	0.00036	21.8	0.9	1	23	565	588	565	588	0.98
15	27	2.4	2.7e+02	3.3	0.3	2	23	596	618	595	618	0.83
16	27	0.00018	0.02	16.3	0.6	2	23	626	648	625	648	0.96
17	27	8.4e-06	0.00093	20.5	1.5	1	23	654	676	654	676	0.98
18	27	3.3e-05	0.0037	18.7	4.1	1	23	682	704	682	704	0.99
19	27	0.00027	0.03	15.8	2.7	1	23	710	733	710	733	0.97
20	27	0.0051	0.57	11.8	0.9	1	23	797	820	797	820	0.94
21	27	1.1	1.3e+02	4.4	0.1	2	23	847	869	846	869	0.92
22	27	0.24	26	6.5	0.2	5	23	895	913	891	913	0.90
23	27	0.48	53	5.6	0.0	1	21	917	937	917	939	0.88
24	27	0.1	11	7.7	1.5	1	19	944	962	944	967	0.84
25	27	0.0012	0.13	13.8	0.9	2	23	1005	1027	1004	1027	0.95
26	27	0.01	1.1	10.8	3.9	1	23	1033	1055	1033	1055	0.97
27	27	0.0017	0.19	13.3	2.0	1	23	1061	1084	1061	1084	0.98

Sequence Information

Coding Sequence: ATGATTCATTGTAAATCTCACAAATCATCCAAAGCATCATTGGACACCTCTCCTGAGGATGAAATGtttgctataaataaagaagacGTAGTTCCTAAAGCTAGGCAAGGAGAACATTTGGAAAAACATAGGAACAATATAAGGGAAGTTATTCTTTGCTCGAACGCTACGCCAATTAGGTGTCGAGGCGGCATTGGTTATGCGTGTTGTTTTTGTTCCAGTCAGTTTCCTGATCCTGCAGACTTAAAGAAACATACGATAAAAGATCATGACGATAAGACGAAAGCAATATTTATGAAAGGGCGGGATATGTACGGATACTTAGTTAAATTAGATATTACAGGATTAGAATGTAATCTATGTGGATTAAAGCTGGAGACTCTAGAGAAAATTTTGGAGCACTTAAAAGACGCTCATAGTAAGAACATCAGCACAGAGGTACCTAACCATATTTTgccttttaaatttgataatgaGTATTTAAGGTGTTTCATGTGTCagaatattttcaacaaatttAAAGCCCTCCAAGAACACATGCATACACATTAccgaaattatatttgtaaagtcTGTGACGCTGGATTTGTTAACCGCCATCTTCTATTATGTCACAATGAGGGCCATAAAACTGGTACCTTTGTTTGTGAACAATGCGACCTAGTTTTTGACACTGTTAGAAAGAAGAAATTGCACGAAAGAAAAATCCATAATGGCTTTAACATGCCTCACAAATGTGGATACTGCAGTGAAAGGTTTAGGGAGAATTGTCACAAAAATGAACACTTAGCGAAAGTACATGGTGTTGTTGGACCAACAATTAAATGTCAAGCTTGCGACAAGACATTTACATTGCAGCAGACTTGGTTACTGcacatgaaaaaatatcatttgctGCAGAAGAAACATGATTGCACGAGATGCGATATGGCCTTTTTTTCTAAAAGGGAGTTAACAGACCACATGGTCAAACACACGGGAACAAGGGAGTTCAAATGTGAAGTTTGCAAGAAATCGTACGGCAGATTAAAGACATTAAAAGAACACGTCAAGAGGCAACACCCAGaagattatttctataaatgtaTACGAACCATTAAAATCGAAAGGCGTTCAACACCTCGAGTCGAGTTGAAGATCATTCGGGGCACCAGGGAGCCTAAACTATCGGATGCCAGGAAAAACCAACAAAATCTTATGACAATTTTGCTTTGTTCCAATGCCAATCCTATTAGATCGAAGGATAGTCTTGGATACGGCTGCGCGTTTTGTCTCGAACAGTTTCAGAATCCGACCGACcttaagaaacattttttagtaGAACATAACAACGACAGATTAATTCAGTACATGACGTCCAGATTATTTGAACATGTCGTTAAATTAGATATTACCTACTTAAATTGTTCCCTTTGCAGCATTAGTGTAGCAAAATTGGAGGATTTGATGCATCACTTAAAGGATGAGCATAAACAAGAAATACACACAGATATAAATAACACTATAGTACCGTTTAAATTCGACACTCCAGAACTAAGATGCGCAATTTGTTCCACGGAATATCTAAACTTCAAACTGTTACAGGAGCATATGAACACTCATTTCGGATATCATTTATGTTCATTGTGTAGCCGAGGCTTTATTACTGAGCGCCTTTTAGCCACTCACATCAGAAGACATGACAACGGTGTATACAAATGTCAAGAGTGCGATAAAGTGTTTGGTAATAATGAGAGGTTAAAGGAACATCAGAGACGGATTCATTTAGGTTTCAACAAACGCAACAAATGTATGATATGTGATGAACGTTTCATGGattactggaggaaggtcgaTCATATGGTGAAAGTGCACGGAGCACCACCAGTAGTCATAAAGTGCCAAGCTTGCGACCGCACGTTTATCAACCAGAGGGCTCTGGCGCGGCACACTAAAAAAGACCACCTTATGGAAAAAAAGCACCAATGTGAAGAATGTGATATGAGATTCTTTAGCGCTAGCGGATTAAAGCGTCATATGGCGAAGCACACAGGACTGCGCGAGTTCAGATGTGATATTTGCTTCAAATGCTACGGCAGAAAGACTACGTTAAGAGAACATATGCGTATACATGCAGACGACCGCAGGTTTGCCTGTAGTAGATGTGGTCAGGCTTTCGTACAAAAGTGCAGTTGGAAGAGTCACATGAGATCCAAACATGGTGACCAGAAACTAACAATTCCAACAAATGTGGGAAGAAAAGACCGAAAAGGTAAAACCATACGAATTACTGTTGAAAAGAAACTAAACATGGTGATAGTGTCAGAGGTGGAAAAACatcagaataatataaaagaaattctttTGAATACAAATGCTACGCCCATTCGTTGTAAGGGAGGCATCGGTTATGCGTGTTGCTTCTGCTCTGAGCAGTTTCCTGATCCAAAAGATTTAAAAGCACACACCCAAGAATCACACAGTGCTGAAgaaaaatctacatttatgAAAGGCAAAGACATGCACGGCTATTTCGTTAAACTGGATATCACAGACGTTAAATGCCAAATTTGTGGGGAAACCATGGAAAGTGTAGAGAAAGTAGTCAACCATCTGCAAATGAATCACGATAAGAAACTTTACACGGACATTAAGGATCACATACTACCCTTTAAATTTGGCAATGGACCTCTCAACTGTATTATATGTTTGAACGTATTTAACTCTTTCAAAGCTCTCCAAGAACACATGAATGTTCATTATAGTAACTATATATGTCTAGTCTGCGGCGCGGGTTTCGTTAATAAAAACATCCTTCTAAGACACGGAGATGCCCACAAAATAGGAACGTTTACCTGCGAAATTTGTTCTAGAACCTTCGATACGGCGCGAAAAAAGCGATTGCATGATCGATCAAGACACGCCGGGATAAAATTGCCTCATAAATGTGGTTACTGCATGGAAAGATTTAAAGAAGTTTGGAAGAAACAGGAGCATTTGGTTAAAGTCCATGGAATTAAGAGTCCAGGGATTAAGTGTCAAGCGTGTGACAAGAGTTTCGAAAGCAAACATTCTTGGAGGCTTCATATAGCAAGAGTGCATCTCTTACAAAGACCACACAAATGTCAGCATTGTGAGATGGAGTTTTATGCTAAAAAGGAGTTGGAGAGCCACATGGTGAAACATACTGGTTCCAGGGAATTTAAGTGTGAATCATGTTTCAAGACTTACGGACGATTGAAGACCTTAAAAGAACATGTCCGAAAAGTACACGTTTGA
Protein Sequence: MIHCKSHKSSKASLDTSPEDEMFAINKEDVVPKARQGEHLEKHRNNIREVILCSNATPIRCRGGIGYACCFCSSQFPDPADLKKHTIKDHDDKTKAIFMKGRDMYGYLVKLDITGLECNLCGLKLETLEKILEHLKDAHSKNISTEVPNHILPFKFDNEYLRCFMCQNIFNKFKALQEHMHTHYRNYICKVCDAGFVNRHLLLCHNEGHKTGTFVCEQCDLVFDTVRKKKLHERKIHNGFNMPHKCGYCSERFRENCHKNEHLAKVHGVVGPTIKCQACDKTFTLQQTWLLHMKKYHLLQKKHDCTRCDMAFFSKRELTDHMVKHTGTREFKCEVCKKSYGRLKTLKEHVKRQHPEDYFYKCIRTIKIERRSTPRVELKIIRGTREPKLSDARKNQQNLMTILLCSNANPIRSKDSLGYGCAFCLEQFQNPTDLKKHFLVEHNNDRLIQYMTSRLFEHVVKLDITYLNCSLCSISVAKLEDLMHHLKDEHKQEIHTDINNTIVPFKFDTPELRCAICSTEYLNFKLLQEHMNTHFGYHLCSLCSRGFITERLLATHIRRHDNGVYKCQECDKVFGNNERLKEHQRRIHLGFNKRNKCMICDERFMDYWRKVDHMVKVHGAPPVVIKCQACDRTFINQRALARHTKKDHLMEKKHQCEECDMRFFSASGLKRHMAKHTGLREFRCDICFKCYGRKTTLREHMRIHADDRRFACSRCGQAFVQKCSWKSHMRSKHGDQKLTIPTNVGRKDRKGKTIRITVEKKLNMVIVSEVEKHQNNIKEILLNTNATPIRCKGGIGYACCFCSEQFPDPKDLKAHTQESHSAEEKSTFMKGKDMHGYFVKLDITDVKCQICGETMESVEKVVNHLQMNHDKKLYTDIKDHILPFKFGNGPLNCIICLNVFNSFKALQEHMNVHYSNYICLVCGAGFVNKNILLRHGDAHKIGTFTCEICSRTFDTARKKRLHDRSRHAGIKLPHKCGYCMERFKEVWKKQEHLVKVHGIKSPGIKCQACDKSFESKHSWRLHIARVHLLQRPHKCQHCEMEFYAKKELESHMVKHTGSREFKCESCFKTYGRLKTLKEHVRKVHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00782813;
90% Identity: iTF_00782007;
80% Identity: -