Hsar020786.1
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- -
- Assembly
- GCA_917862395.2
- Location
- OU860800.1:8104268-8107200[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-11 8.5e-08 32.2 0.0 4 35 100 132 97 137 0.92
Sequence Information
- Coding Sequence
- ATGAAAAGATTAGATTCACTAATTTACACCTCCCGATCTCGAACAGGAAGTTTACGACCGGACATTTTATCTAATGCTACCGTGCCCAGCCCATCGCAGCCGGaAGACGCGCGACGCCGCGCCCCGCCGCTAGTCCGCCGGCGCACGTGTACAAGAGCCGGCCGCGCGACTCGCAACGCACCCGCTATTGCAAAATTGCTTGAGAACTCTCATGCATGGCTCGGAGCCTCCACATCTTCGATCGCAGAATACCACGGTCATACCCTCAAGTTGAAAGCACCCACTTGGACACAGAGCCAGCTGCAAGAAGCGATACAGGCGGTGGTCACGCAGCGTATGAGATTCACGCAAGCCGCCACGCACTATGGAATACCTAAGGGGACtctatatgataatatattaggAAAATCCAAAAGAATGGCAGTGTTAGACGAGGCCGGACTGTTGGCTAGCGAGGAACGCGCTGTTCTAGACTTCTGTTGTGAAACTAGCGTCTCTCCGTATAATAGAAGGACTAAGAAGTCAATTGTTGAAGTTTTGGCATTCGTTGAGAAGCTGCGTCGCAGTAGAGACTCTGGTTTCGCCTTCATAGGTCTGACAGGGTTCCGATGGTGGTGGGCGTTCTGCAAAAAACATTCTATAGTCTCCCTGTATTACGAAGGTTCCTCTAAAGCTAAAAACTCGAAAGTGAAAACAGAACATACAGATGATGATGAgtcatga
- Protein Sequence
- MKRLDSLIYTSRSRTGSLRPDILSNATVPSPSQPEDARRRAPPLVRRRTCTRAGRATRNAPAIAKLLENSHAWLGASTSSIAEYHGHTLKLKAPTWTQSQLQEAIQAVVTQRMRFTQAATHYGIPKGTLYDNILGKSKRMAVLDEAGLLASEERAVLDFCCETSVSPYNRRTKKSIVEVLAFVEKLRRSRDSGFAFIGLTGFRWWWAFCKKHSIVSLYYEGSSKAKNSKVKTEHTDDDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00695429; iTF_01021118; iTF_01336777; iTF_00761583; iTF_00985935; iTF_00461496; iTF_01495713; iTF_01496486; iTF_01494247; iTF_00249644; iTF_00842588; iTF_01034521; iTF_01033660; iTF_01176128; iTF_00204296;
- 90% Identity
- -
- 80% Identity
- -