Taea000332.1
Basic Information
- Insect
- Troides aeacus
- Gene Symbol
- -
- Assembly
- GCA_033220335.2
- Location
- CM067268.1:4597069-4600057[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-11 5.5e-08 33.0 0.0 3 35 97 130 95 135 0.91
Sequence Information
- Coding Sequence
- ATGTACGACGAGCTAATGTTTACGTTCGGGCCGCTAGCGACGGGCGGCCCCGGCGGCTCGGGCGGCTCCGGCGGCTCCGGCGGCATCGGCGTTCAGCGGCGATTCTTTGTGCCTAACGCTCTAGCAAAGCTTTATAGAAGTTTTAATTGTGGCAGCAGACAAAGGCGGCGCTTTAATACGGCAGCTAAGTTGCTGGAGAACTCGCACGCTTGGCTTGGAGCATCGACATCTTCGATCGCAGAATTCCACGGTCATACTTTGAAGTTGAAAGCACCCACCTGGACCCAGGCACAACTGCAAGAAGCAATTCAAGCTGTAGTCACACAGAGAATGCGGTTCACTCAAGCTGCCACACATTACGGAATACCTAAAGGGACACTGTACGACAACATTCTGGGCAAATCGAAACGAATGGCAGTGTTAGACGAAGCAGGACTGTTGCCAAATGAAGAAAGGGCAGTTCTAGACTTTTGTTGTGAAACCAGTGTCTCGCCGTACAACAGGAGGACTAAGAAATCATTAACCGATGTACTGACATTCGTCGAGAAACTGAAACGGGCCAGAGATCCTGGTTTCACATTCATTGGTCTTACTGGTTTTCGGTGGTGGTGGGCTTTTTGTAAGAAACATTCAATTGTGTCCTTGTATTTCGAAGGATCTGTTAAGGGTAAAAGTGCAAAAGTCAAAGCTGAAAGTAATACTGATGACGAATCTTAA
- Protein Sequence
- MYDELMFTFGPLATGGPGGSGGSGGSGGIGVQRRFFVPNALAKLYRSFNCGSRQRRRFNTAAKLLENSHAWLGASTSSIAEFHGHTLKLKAPTWTQAQLQEAIQAVVTQRMRFTQAATHYGIPKGTLYDNILGKSKRMAVLDEAGLLPNEERAVLDFCCETSVSPYNRRTKKSLTDVLTFVEKLKRARDPGFTFIGLTGFRWWWAFCKKHSIVSLYFEGSVKGKSAKVKAESNTDDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00782572;
- 90% Identity
- iTF_01495713; iTF_00249644; iTF_01176128;
- 80% Identity
- -