Hpyr007423.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015585.1:16373259-16376680[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9 2.3e+03 -1.2 0.1 14 24 21 31 14 32 0.70 2 2 7.1e-10 1.8e-07 31.1 0.0 4 35 66 98 63 103 0.92
Sequence Information
- Coding Sequence
- ATGAAATGTCAATTTTTAAAACGCTGCAATAACGTGACACCCGCAATTCGTTCCCGCGCCACCGGGCGGCGCGGCGTGCGGCGCGCGGCAAAGCTTCTGGAGAACTCTCATGCCTGGCTGGGTGCCTCCACTTCATCCATTGCAGAATTCCACGGTCATACTCTCAAGTTGAAAGCACCAACATGGACACAGAGTCAGCTCCAAGAAGCAATACAGGCAGTTGTCACCCAACGAATGAGGTTCACGCAAGCGGCGACGCACTTCGGCATACCAAAAGGAACATTATATGATAATATATTAGGTAAATCTAAAAGAATGGCCGTGTTGGATGAAGCCGGCTTACTAGCGAGTGATGAACGAGCTGTGTTAGACTTTTGTTGCGAAACCAGTGTGTCTCCTTACAATAGACGGACAAAAAAATCGTTAACAGAAATCCTAACATTCGTACAAAAATTAAGAAGATCACGAGACCCAGGCTTCGCATTCATTGGTCTAACAGGCTTCAGATGGTGGTGGGCATTTTGTAAGAAACACTCTATAGTATCACTCTACTATGAGGGTACTGCTAAATCAAGAAATTCGAAAGTCAAAACTGAATTGACTACAGATGACGAGTCGTAG
- Protein Sequence
- MKCQFLKRCNNVTPAIRSRATGRRGVRRAAKLLENSHAWLGASTSSIAEFHGHTLKLKAPTWTQSQLQEAIQAVVTQRMRFTQAATHFGIPKGTLYDNILGKSKRMAVLDEAGLLASDERAVLDFCCETSVSPYNRRTKKSLTEILTFVQKLRRSRDPGFAFIGLTGFRWWWAFCKKHSIVSLYYEGTAKSRNSKVKTELTTDDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00782572;
- 90% Identity
- iTF_01152959;
- 80% Identity
- -