Hcyd000813.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius cydno
Gene Symbol
ZFHX3
Assembly
GCA_036379175.1
Location
FAPN01014650.1:64-8897[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.11 14 7.4 0.2 2 23 220 242 219 242 0.94
2 16 0.00021 0.027 16.0 1.8 2 23 436 458 435 458 0.95
3 16 5.1e-05 0.0066 17.9 0.7 1 23 490 514 490 514 0.92
4 16 0.0076 0.97 11.0 0.4 1 22 561 582 561 585 0.91
5 16 0.88 1.1e+02 4.5 0.3 1 23 840 864 840 864 0.92
6 16 0.0022 0.29 12.7 2.1 1 23 977 1000 977 1000 0.96
7 16 0.056 7.2 8.3 0.0 1 23 1007 1030 1007 1030 0.95
8 16 0.0023 0.29 12.7 2.5 2 22 1086 1106 1086 1109 0.91
9 16 0.017 2.1 10.0 1.0 1 23 1121 1146 1121 1146 0.94
10 16 0.0086 1.1 10.9 1.3 1 23 1164 1186 1164 1186 0.97
11 16 0.00035 0.045 15.2 0.3 2 23 1193 1215 1192 1215 0.96
12 16 0.0002 0.026 16.0 3.1 1 23 1321 1345 1321 1345 0.92
13 16 0.0083 1.1 10.9 0.7 1 22 1365 1386 1365 1389 0.89
14 16 0.00083 0.11 14.1 0.2 1 23 1436 1460 1436 1460 0.93
15 16 1.3 1.6e+02 4.0 0.1 3 21 1535 1553 1534 1554 0.90
16 16 0.61 78 5.1 3.5 2 19 1644 1661 1643 1666 0.91

Sequence Information

Coding Sequence
ATGCCCACGCCGCTGCAGCCCGGCGGCCCCGTTAGCGGCCCGCCTCCGGAGCGCAAGCGGCGCCGCAAGCGCGACGATCCGCAGAGTTCAGCCGCACTCGAACCGGACGAAGACGGCGACATGAGCCCTGAGGAAGAACCACGAAACGCTCCTGCAGCCCCAGCGGCGCCCACCCCCGCACCCTCGTCTGCGCCAGCACCCACCTCGCCTCCAGCTGCTCCAGACGCCGTTGATCTCACCTCACGCCGTGATTCTCCACCGCTATCCTCTGATGTTGAACACTTCGATGGCAAGATCGTCTATAATCCTGACGGATCTGCTTATATTATTGAGGATCCGGAAATATCAGAAGGAGAAACTAGCCTTTCAGACTTGCCTAAAATAGAGCCTGGTTGCATCGTAGACAGTCGGGAGAGTAATGTAGTGGAAAGGCAACTTGAGTTTCCTCAAATAGCGAGTGCATTCTACGTTTCTAGAAACCCTTCGTTGTATGGTGCCCTGTATGGAAGACTGGCTGCAGAACGAGCGCGAGCGAGACACGACGCTCCTGTGATGCATAGTTATCGAGTGTTTAGTTTTCGCGGAGGAAAGGACGCTCCTAGACCATCGTCACCAGTGCCAGAATGTCCCATAAGCGTGCCAGTGAAACCAATTCTTAtgtgttttatatgtaaattgagTTTTGGATATGCTAAATCTTTTGTAGCTCATGCCCAATCAGATCATAGTTTATCGTTACTCGACTCAGAAAGAGATGCCTTATCGAGAGAAAACGCATCTGCAATTATACAGTGTGTTGGAAAAGATAAAGAGCCACTAGTCTCGTTCTTAGAACCAGTTGGTGCAGCCGCACCACCACGTGCTTCAATGTCGGGCAGTCCTGCTAATATGTCTGAATTATCAAGCCCTACTATTGAAAAACGTCAAGAGACAATGACACCAGATAGAGATAACGACTCAATGTTACCAAACGGTTCCTGTGACGATAGAAGACCGAGTCCGCCTTCCTGGAGACCACCAAGATCCATGGCAGACTCTTTATTACCGCAACATTCCATGATTTCAGTAGCTCATCCTCACACAATAAATGCTTCTGTACAGCCCCGTGCTAGCCCGAATTCATCACCACCATTCCAAGCAGCACCTCCAGCATTCCTATCTGGTACAACGATAGGAGTATGTCCGGATCATCTTGGAGGACGACCATCTGGTGCTGATTGCCCGAAGTGTgagcttattttaaattcggGAAGATTAGGTGGACCTTTAGCTGGAATGCACAGCCGAAACTCctgtaaaacattaaaatgccCAAAATGTAATTGGCACTACAAATATCAAGAAACTTTAGAGATAcatatgaaagaaaaacatcCAGAAGCTGAAACAAGTTGCATCTACTGTATTGCTGGTCAACCTCACCCACGATTAGCTAGAGGTGAAACTTATACTTGTGGATATAAACCTTATCGTTGTGAAGTTTGTAATTACTCAACGACGACGAAGGGCAATTTGAGCATACATATGCAGTCTgacaaacatttaaataatatgcaagAGCTACAAAATGGTGGAAATCCAGGTGAAGGAAATTTACCACCAGCACAACACACTCCACCTGGACCACACAAGCCACCGCTACCACATCATTCGCCTTTGGGTCAAAAACCAAAACCTACGTTCCGGTGTGATGTCTGCAACTACGAAACAAATGTGGCACGTAACCTTCGAATACATATGACATCCGAAAAACATACCCACAATATGCTTGTACTTCAACAAAACGTTAAGCATATGCAAACTTTATCAGCTTTACATCACAGGCAGCAAAGCCAACAGCAGCTTGAAAGCCTATTACATTTTCACAGTGGAGATGCTCCTCCACCTAATCCGGAAGCGGCGCTCGCTGATATGGCATATAATCAAGCCTTGATGATTCAACTTATGACAGGAGGCCCAGGACCATCACCGCCCGAACTAGGCGCCCATTTAGATGTTGGCTTAAATCCTGAGGCTATGGAACCTCCACCAGAACCTGCAGACCCGGAGCCAGAAAGAACGTTCCACTGCTGTATATGTAATTGTTTCTCAACAGATTCCTTGGAAGCTCTTGGTCACCACTTGGCACAAGATCGTACAAAGATAAGAGAGCAGGAAATATTAGCATTGGTAGCTGGGCATTACGTTTGCAAATTATGTacgtataaaacaaatttaaaagccAACTTTCAATTGCATTGCAAAACTGATAAACATCTGCAGAGGCTACAGCATGTCAATCATGTCAAGGAAGGTGGTCCAAGAAATGAGTGGAAACTGAAATTTTGTGGTGGAGTTGGAACTGGTGGTGCAGGTATTGGTGGCGTACAAGTTAGATGTTGTGCTTGTGATTATTACACTAACTCAGCGCATAAACTGCAATTACATGCTGCAGGAGCCAGGCACGAAGCAGCTACGCTTCTATTGAGACACCTTAGGGATTGTGCTTCCAGGATACCTCGAGAGCGCCCTCGAGTTTACCGATGTGCATTATGTGGCTTTGGAGCTCCACATCGTTTGTCCTTGTTACAACATGTTCGTTCTGTGAAGCACTTGCAAATGGAGCAAATACATCAACTACAACGACGATCTGAAGGAAAAGATCCCACTCCTGACGTAGCAGAACTTTTCCAAGTTATACCACAACCTTCAGAGCTGCCTAGTCCATACGATCAACAAGAAAAtgaTACAAAGGAGCCAATTGACCAAAAACCAGAACTAACGCAAGAGCAAAAAATGATGCGATTCTTAGAACAGCATCAACAACtgcaacaacaacaacagcaGCACCAACAACAGCAACAACAGTTGCAACAGCAACAGTCAATGCAACAAACTCCTCAACCAAGTTGTAATGAAAAAGATGAAGATCGTGAAACACCTGGGCAGCATACATGCCCGTACTGTAATTTTAGCTGCGCAAGTGAAAGTAGACTACAAGCACATGTAAACTCAGTACATGGTGATACCTTGCGGCATTTTATCTGTCCTTTGTGTCAAGATGCCTTCAAAGAAAGACCAGCATTGGAGCGACATGTAATGCAAATACATTCTGTTAATTCAGAAGGATTACAGCGACTTCTTCTTCTAGTAGATCAAAGTCACTGGCTAAACGGAGGAGGACAGCCACAGAGAGAAGATTCAAGACAAGGAGACGACAATGAAAGGGAAATTTCGTCGCCTCGCTCTGAAGGTAGCGTAGATGGTGAGACTGAACGTTGTTCAACGTGTAACCGTACATTTCGAAACGTGGATGAGTTATGCCAACATCAAAATGAATCTGGTCACTTAGAACTGAAACAAACGCCGCAAGGACCTGGTTATGTTTGTTGGAAAAAAGGATGTAATAGATACTTTGATTCAGCTCACGCCttacaaaatcattttagAGAAGCTCATGCACGTAATTCTATTACAAATATGTCTGTATCTGAAAAACACgtctataaatatagatgCAATCAATGTAGTTTGGCATTTAAAACGgttgaaaaattacaattacactCTCAATATCATGTTATACGCGATGCTACAAAATGCGTATTATGCGGTCGGAGCTTTAGATCTGTATTAGCTCTACAAAAACACATTGAAACGTCCCACCCTGAGTTATCTGAAGATGAGTTGACTGCTTTTAAACGTAACCTCGCTACAAATCCCCTGTTACACCCAGGTCAAAGTGTCGCTTTAGATGCCACAACAGCGGATTTATTGCGGAAAGAAGCGCTGCGAACACCCGAAGACGAACTCGGTGAAATGGAAGATAGAGACTCAAGTGCCACTGCAGCTGATGAATCTGGCCACAACGATGCTGAAAACTCAGATGattcaataatatacaaagaCCAGCAATTCCTTGAAGACTACCTAAACTCGCAGGCCATGGCGGAAGATTCTTATAACGATCCAAACAGAAAATACAAATGCCATAGATGTAAAGTGGCCTTTACGAGGCAATCTTATTTGACTGCACATAATAAAACTCTCCTTCACAGAAAAGGTGAAAAACTTACGTATCCTATGGAGAAATACTTAGATCCTAACAGGCCATTTAAATGTGATGTGTGCAAAGAATCGTTTAcgcaaaagaatattttgctCGTCCACTACAATAGTGTAAGTCATTTGCATAAATTAAAGCGGGCTATGCAAgaacaacaaaacaataacaatccTCCTGTCTCACCTGGCGCAGGCACTGCGCCCTCTAATTTGACTCTCACTCCCAAAAGCACGTCTAGCGAAGAAGACGATAGAAAACGCTACAagtgtaatatatgtaaagtcGCATATACACAGGGGAGTACACTGGATATTCATATGAGGTCGGTATTACATCAAACAAGGGCGGGAAAGCTACAAGAGCTCGCCGCTGCGGGCCACGTGGATTTGACACGACCTTTAGTCGAACAGCCGGATAGAAACGACTCTGCTAAAATTTTACAAGACGTGTTGTCGCCGAAAAATACATCCCCTTCGTCTACAAGCAGCGGGGGACATCGTTCCTCGCCCCCCGCGCGCCCAGGTAGCCCGCGATCCCCTCGCGCAGGTAGCGCCTCGTGCGAGCGATGCCACGCGTCATTCCCTACTGGGGAGCTACTCGACGCACATCGAGCAACTTCATGCCCATTTGGCGATGCGCGGGCGCATTCGCCACTCGGTGAGGCAGAAGCTGCTGCTCTAGACGAAATGGTAGCAAAGGGCAACCCGCCCAAACGTAACTCACAAATGTATAAGCAACTACTTGAAACGTTTGGATTCGACCTCGTGATGCAATACAATGAAAATCAAAGACGCAAATTACAAGAAGAACGAGAGATGGCTCGAGTACCGAGTCCTCCTCCTCCACCACCTGAAGAGAAGCCTCCCGACGGAGAAACAAAGTCCACGTGTCAGCATTGCAATAAGGAATTTTctagtgtttttgttttaaagacCCATTGTGAAGAAGTGCACAAAGACAAAGTTCCGCTCGAATTTTTGGAGCAGTTTGCAGAACAGTTTAAATCGGAATATGAGAGAAAGTCGGGTGCCCCGAACTCGCCACGTGCTGCGTCTCCAGCACCTCAAGGAGACCGATCGCCGTCACCTCGAGGCGATAACAGTGGAAGTTTTAATGATAGCGCAAACGGCCCTGGAGAGGCTCAAGCCGGTGCCTTATTAGCAGCTCAAGTGCAAGAAATGCAAGCTGCTTTGAATATGTTACAACTACAGCAACAGCTCGGACAACTGCATCCAATGATGGCTCAAATGCTGTCTCTTGGTCTTCCCTTGGGCCTCAACATGGGTGCGCTGGCGGCGATGAACTTGCAGCCACCTCTCGTGTCTCTCATGTTGCCCCCGCCGCCCTTTGATGCAATGCCTTTTTCACATGATGCACAACTCAAACAACAGCAGCTACTACAGCAACAACAACAGGTG
Protein Sequence
MPTPLQPGGPVSGPPPERKRRRKRDDPQSSAALEPDEDGDMSPEEEPRNAPAAPAAPTPAPSSAPAPTSPPAAPDAVDLTSRRDSPPLSSDVEHFDGKIVYNPDGSAYIIEDPEISEGETSLSDLPKIEPGCIVDSRESNVVERQLEFPQIASAFYVSRNPSLYGALYGRLAAERARARHDAPVMHSYRVFSFRGGKDAPRPSSPVPECPISVPVKPILMCFICKLSFGYAKSFVAHAQSDHSLSLLDSERDALSRENASAIIQCVGKDKEPLVSFLEPVGAAAPPRASMSGSPANMSELSSPTIEKRQETMTPDRDNDSMLPNGSCDDRRPSPPSWRPPRSMADSLLPQHSMISVAHPHTINASVQPRASPNSSPPFQAAPPAFLSGTTIGVCPDHLGGRPSGADCPKCELILNSGRLGGPLAGMHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPEAETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQNGGNPGEGNLPPAQHTPPGPHKPPLPHHSPLGQKPKPTFRCDVCNYETNVARNLRIHMTSEKHTHNMLVLQQNVKHMQTLSALHHRQQSQQQLESLLHFHSGDAPPPNPEAALADMAYNQALMIQLMTGGPGPSPPELGAHLDVGLNPEAMEPPPEPADPEPERTFHCCICNCFSTDSLEALGHHLAQDRTKIREQEILALVAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGPRNEWKLKFCGGVGTGGAGIGGVQVRCCACDYYTNSAHKLQLHAAGARHEAATLLLRHLRDCASRIPRERPRVYRCALCGFGAPHRLSLLQHVRSVKHLQMEQIHQLQRRSEGKDPTPDVAELFQVIPQPSELPSPYDQQENDTKEPIDQKPELTQEQKMMRFLEQHQQLQQQQQQHQQQQQQLQQQQSMQQTPQPSCNEKDEDRETPGQHTCPYCNFSCASESRLQAHVNSVHGDTLRHFICPLCQDAFKERPALERHVMQIHSVNSEGLQRLLLLVDQSHWLNGGGQPQREDSRQGDDNEREISSPRSEGSVDGETERCSTCNRTFRNVDELCQHQNESGHLELKQTPQGPGYVCWKKGCNRYFDSAHALQNHFREAHARNSITNMSVSEKHVYKYRCNQCSLAFKTVEKLQLHSQYHVIRDATKCVLCGRSFRSVLALQKHIETSHPELSEDELTAFKRNLATNPLLHPGQSVALDATTADLLRKEALRTPEDELGEMEDRDSSATAADESGHNDAENSDDSIIYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLTYPMEKYLDPNRPFKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNPPVSPGAGTAPSNLTLTPKSTSSEEDDRKRYKCNICKVAYTQGSTLDIHMRSVLHQTRAGKLQELAAAGHVDLTRPLVEQPDRNDSAKILQDVLSPKNTSPSSTSSGGHRSSPPARPGSPRSPRAGSASCERCHASFPTGELLDAHRATSCPFGDARAHSPLGEAEAAALDEMVAKGNPPKRNSQMYKQLLETFGFDLVMQYNENQRRKLQEEREMARVPSPPPPPPEEKPPDGETKSTCQHCNKEFSSVFVLKTHCEEVHKDKVPLEFLEQFAEQFKSEYERKSGAPNSPRAASPAPQGDRSPSPRGDNSGSFNDSANGPGEAQAGALLAAQVQEMQAALNMLQLQQQLGQLHPMMAQMLSLGLPLGLNMGALAAMNLQPPLVSLMLPPPPFDAMPFSHDAQLKQQQLLQQQQQV