Basic Information

Gene Symbol
ZFHX3
Assembly
GCA_012273895.1
Location
CM022609.1:5631573-5677590[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.098 6.5 7.3 0.2 2 23 221 243 220 243 0.94
2 17 0.00018 0.012 15.9 1.8 2 23 437 459 436 459 0.95
3 17 4.5e-05 0.003 17.8 0.7 1 23 491 515 491 515 0.92
4 17 0.0067 0.44 11.0 0.4 1 22 562 583 562 586 0.91
5 17 8.9 5.8e+02 1.1 4.2 1 20 729 748 729 753 0.89
6 17 6.3 4.2e+02 1.6 0.2 1 23 841 865 841 865 0.87
7 17 0.012 0.81 10.1 4.6 1 23 974 997 974 997 0.96
8 17 0.0081 0.54 10.7 0.0 1 23 1004 1027 1004 1027 0.95
9 17 0.0046 0.3 11.5 4.1 2 22 1082 1102 1082 1105 0.91
10 17 0.37 24 5.5 0.7 1 23 1117 1142 1117 1142 0.92
11 17 0.0075 0.5 10.8 1.3 1 23 1160 1182 1160 1182 0.97
12 17 0.0011 0.071 13.5 0.3 2 23 1189 1211 1188 1211 0.96
13 17 0.00018 0.012 15.9 3.1 1 23 1317 1341 1317 1341 0.92
14 17 0.0073 0.48 10.8 0.7 1 22 1361 1382 1361 1385 0.89
15 17 0.00073 0.048 14.0 0.2 1 23 1432 1456 1432 1456 0.93
16 17 1.1 74 4.0 0.1 3 21 1531 1549 1530 1550 0.90
17 17 0.53 35 5.0 3.5 2 19 1640 1657 1639 1662 0.91

Sequence Information

Coding Sequence
ATGCCCACGCCGCTGCAGCCCGGCGGCCCCGCTAGCGGCCCGCCTCCGGAGCGCAAGCGGCGCCGCAAACGCGACGACCCGCAGAGTTCAGCATCGCTCGAGCCAGACGACGAAGACGGCAATATGAGCCCTGAAGAGGAACCTAGGAATGCGCCGGCAGCCCCGGCGGCCCCTACTATGGCCCCGTCCTCTGCTCCCGCGCCCACTTCACCGCCCGCCGCCCCGGACGCTGTAGACCTCACTTCACGCCGTGACTCACCGCTCCTGTCCTCTGATGTTGAACATTTTGACGGCAAGATAGTATACAATCCTGACGGCTCCGCTTACATTATCGAGGATCCTGAACTATCAGAGGGTGAAACGAGTCTGTCGGATTTACCTAAAATTGAACCGGGCTGCATCGTTGATAGCAGAGACAGCAACGTCGTTGAGAGACAACTTGAGTTTCCTCAAATTGCGAGTGCTTTTTATGTGTCAAGAAACCCTTCTTTATATGGTGCGCTGTATGGAAGACTGGCTGCTGAAAGAGCGAGAGCGAGGCCTGACGCGCCTGTTATGCATAGTTATCGAGTGTTCAGTTTTCGTGGAGGAAAAGAGACTCCGAGACCCCAGTCTCCAAACCCTGAGTGTCCTATTAGTGTACCAGTTAAAccaattttaatgtgttttatatgtaaactaAGCTTTGGCTACGCTAAGTCGTTTGTAGCGCATGCACAGTCAGATCATAGTTTATCATTACTTGATACGGAACGCGATGCATTATCGAGGGAAAATGCATCTGCTATCATTCAATGCGTTGGAAAAGATAAAGAACCCCTAGTCTCATTCTTAGAACCCGTGGGAGCCGCTGCGCCACCACGTGCTTCCGTGTCTGGTAGCCCTGCAAATATGTCAGAATTATCGAGTCCATCAGTAGATAAAAGACTAGACCTTATGACACCGGATAGAGAAAATGACAATATGTTACCTAATGGATCATGCGATGACAGGAGACCAAGTCCACCTGCTTGGAGACCACCTAGATCAATGGCTGAATCATTAATGCCACaacattcattaatttcagTAGCTCATCCTCATACCATTAACGCGTCAGTACAACCACGTGGAAGTCCAAATTCATCACCACCATTCCAAGCAGCTCCACCAGCTTTTCTGTCGGGCACCACAATAGGAGTATGCCCGGACCATTTAGGTGGAAGGCCATCAGGTGCTGATTGCCCAAAATGCgagcttattttaaattctggTAGATTAGGTGGACCACTAGCTGGTATGCACAGTCGAAACTCATGTAAAACGCTTAAATGTCCTAAGTGCAACTGGCATTACAAATACCAAGAAACATTGGAAATTCATATGAAAGAGAAACATCCTGAAGCAGAAACAAGTTGTATTTACTGCATTGCGGGCCAACCTCATCCACGGTTAGCAAGAGGTGAGACGTATACTTGTGGATACAAACCCTACAGATGTGAAGTGTGTAATTACTCGACTACGACAAAAGGTAACCTTAGCATACATATGCAGTCTGACAAACATCTTAATAATATGCAAGAGTTACAAAATGGTGGTAATCCCGGAGAAAGCAACTTACCTCCCTCACAACATACGCCACCAGGTGCGCATAAGCCTCCACTACCACATCACTCACCTTTAGGACAAAAACCAAAGCCTACCTTCAGATGTGACGTCTGTAACTACGAGACAAATGTAGCAAGAAACTTAAGGATACACATGACTTCTGAAAAACATACGCATAACATGCTTGTACTACAACAAAATGTGAAGCATATGCAGACTTTGTCAGCCTTACATCATAGACAACAAAGTCAGCAACAACTTGAAAGTCTTTTGCATTTCCATGGGGGAGATGCCCCACCGCCAAACCCAGAAGCAGCGTTAGCAGATATGGCATACAATCAAGCGCTTATGATTCAGCTGATGACTGGTGGACCTGGACCATCTCCACCCGAACTTGGCGCACACTTAGACGTGGGTCTCAATCCTGACGCCATGGAACCACCTCCAGAACCAGCTGACCCCGAACCCGAAAGGACTTTCCATTGTtgtatatgtaattgtttCTCCACCGATTCCTTGGAAGCCTTGGGTCATCACTTAGCTCAAGACCGCACCAAGATAAGAGAACAAGAAATCCTGGCCCTAGTCGCTGGCCATTACGTTTGCAAATTATGCACATACAAAACAAACTTGAAAGCAAACTTCCAACTGCATTGCAAAACGGACAAACATTTGCAAAGGCTACAGCATGTCAACCACGTGAAAGAAGGTGGACCACGAAATGAAtggaaattgaaattttgcgGTGGTGTCGGAACTGGCGGTGCAGGTGTAGGTGGTGTGCAAGTGAGATGCTGTGCGTGTGATTACTACACAAATTCGGCGCATAAATTACAACTACATGCCGCTGGTGCTCGTCACGAGGCAGCCACTTTGTTGCTAAGACATCTTCGAGACTGTGCATCAAGAATACCACGTGACCGCCCTCGAGTGTATCGTTGTGCTTTGTGCGGTTTCGGAGCCCCACATCGCCTCCCACTTTTGCAGCATGTGCGCTCCGTCAAACATCTACAAATGGAACAAATCCATCAACTTCAACGTCGGTCAGAAGGCAAGGATCCCACACCAGACGTAGCTGAACTCTTCCAAGTCATACCTCAGCCACCAGAGCTACCTAGTCCATTTGATCAACAAGAAAATGATACTAAGGAGCCCATTGATCAGAAACCTGAGTTGACTCAAGAACAAAAGATGTTGAGATTTTTGGAACAAcatcaacaacaacaacagcaGCAACACCAACAAcagcaacaacaacaacagcaACAGCTTTCGCAGCAATCAATGCAACAATCTTCGAGCGAGAAAGACGAAGAAGAAGTAACGGGATCGCACACATGTCCGTATTGCAATTTTAGTTGTGATAGTGAAAGCAAACTTCACGCTCACGTAAACTCTATTCATAGCGATACAGCGCGGCATTTTATTTGTCCTTTATGCCAAGACGCCTTCAAGGACCGACCTGCGCTTGAACGACATGTAATGCAAATCCATTCCGTAAACTCTGAAGGTCTACAACGCCTTCTTCTCTTAGTAGACCAAAGCCATTGGTTGAATGGCGGTGCACAAACGCAACGAGAAGATTCAAGGCAAGGCGAAGAAGATCGCGAGATTTCATCTCCACGCTCAGAGGGCAGTGTGGACGGAGAGACAGAGCGATGCTCGACTTGTAACAGAACATTCCGCAACGTCGACGAACTCTGTCATCATCAAAACGAGTCAGGGCATTTAGAATTGAAACAAACACCGCAAGGTCCTGGTTACGTTTGTTGGAAGAAAGGATGTAATCGATATTTTGAAGCGGCTCATGCCCTACAGAATCACTTTAAAGAAGCTCATGCGCGCAATTCCATTGCAAACATGTCGGTATCGGAGAAACACGTTTACAAGTACCGTTGTAATCAATGTAGTCTCGCATTCAAAACAGTTGAAAAGCTTCAACTGCATTCACAATATCATGTTATCCGCGACGCTACTAAATGTGTTTTGTGCGGACGCAGCTTTAGATCAATACTGGCTCTCCAAAAGCATGTGGAGACTTCGCATCCTGAACTGTCTGAAGATGAATTATCTGCATTCAAGCGAAGTTTAGCGTCAAATCCCTTATTGCAATCAGGCCAGGGCACCGCTTTAGATCCAGCTACGGCTGATCTATTGCGAAAAGAAGCGTTAAGAACACCAGATGATGACCTGGGAGAGTTAGAAGACAGAGATTCGAGTGCCACCGCTGCTGACGAGTCCGGTCACAATGACGCTGAAAATTCAGATGATTCCATAATTTACAAAGATCAACAATTCTTAGAAGATTACTTGAACTCGCAAGCTATGGCAGAAGATTCTTATAATGATccaaacagaaaatataaatgtcacAGATGTAAAGTTGCATTTACAAGGCAATCTTATCTAACGGCACATAATAAGACTCTCTTACATAGAAAAGgtgaaaaattaacatatccTATGGAAAAATACTTAGACCCTAACAGACCGTTCAAATGCGACGTATGCAAAGAATCTTTCACAcagaaaaatatcttattggTTCATTATAATAGTGTCAGTCATTTACACAAATTGAAACGGGCAATGCAAgaacaacaaaacaacaacaacCCGCCCGTTTCACCAGGCGCGGGAACAGCGCCATCCAATTTAACTCTCACTCCAAAAAGTACGTCGAGTGAAGAGGATGACCGTAAAcgatataaatgcaatatatgCAAAGTGGCTTATACGCAAGGCAGCACGTTAGACATTCATATGCGATCTGTTTTGCATCAAACACGTGCCGGAAAGTTGCAAGAGCTCGCCGCTGCGGGCCACGTTGACTTGACACGGCCTTTAGTAGAGCAGCCGGATAGAAACGACCCCGCCAAAATTTTACAAGACGTATTGTCGCCAAAAAATACATCCCCTTCATCTACGAGCAGCGGGGGGCCGCGTTCCTCACCCCCCGCTCGCCCAGGTAGCCCTCGGTCCCCACGGGCAGGTAGCGCCTCGTGCGAGCGCTGCCACGCGTCATTCCCAACTGGGGAGCTACTCGACGCACATCGCGCTACTTTATGTCCGTTTGGCGATGCGCGGGCGCACTCGCCGCTTGGTGACGCAGAAGCAGCCGCTCTCGACGAGATGGTAGCGAAGGGCAATCCGCCCAAAAGGAACTCGCAAATGTATAAACAACTCTTAGAAACGTTCGGCTTCGATCTCGTCATGCAGTACAATGAGAATCAGCGCCGCAAACTGCAAGAGGAGCGTGAGATGGCGCGGGCACCGAGCCCGCCGCCTCCACCGCCTGAGGAGAAGCCCCCGGACAGTGAAACGAAATCGACGTGTCAACATTGTAATAAAGAGTTTTCTAGTGTGTTCGTTTTAAAGACTCATTGTGAAGAAGTGCATAAAGATAAGGTTCCTCTCGAGTTTTTGGAACAGTTCGCGGAGCAATTTAAATCTGAATATGAGAGGAAATCGGGTGCGCCGAACTCGCCGCGGGCTGCATCCCCTGCTCCTCAAGGCGATCGCTCGCCCTCACCCCGTGGTGACAGCAATAGCAACTTCAACGAGAACGCGAACGGCTCTGGTGAAGCACAGGCTGGAGCTTTACTTGCCGCACAAGTACAAGAGATGCAGGCAGCCCTCAACATGTTACAATTACAACAGCAGTTAGGTCAACTGCATCCCATGGTGGCCCAGATGCTTTCACTGGGGCTGCCCCTCGGCCTGAACGTTGGGGCCCTCGCAGCGATGAACCTGCAGCCTCCATTGGTACCGCTAATGTTACCACCTCCGCCATTCGATGCAATGCCGTTTTCACATGACGCccaattaaaacaacaacaattaaTCCAGCAACAACAACAGGATGCGAGCGGATGCGAGCAAGCGCTTTACTTTGTCGTAACGAAACAAGACGAGGTATTAGAAGATGAATCGTGGAGATTAGAAGGTGAGGCTTCGCCGGCGGGTCACCGATCATATCTCTGTGTACTTTTTAGTAGTGACTTGAGGATGTGTTGGCCTTGCAAGCGTCTCGCCACGCAGTCTACGGCGGAAGTTTACGACCGACCGCCAGCCACTTTTATTGGCTACCTCGCATCGAAGCCTCCTCACAGCCTCCCATTCACTCCAAgaaatacacttttttattgCTCTGTCACTTGG
Protein Sequence
MPTPLQPGGPASGPPPERKRRRKRDDPQSSASLEPDDEDGNMSPEEEPRNAPAAPAAPTMAPSSAPAPTSPPAAPDAVDLTSRRDSPLLSSDVEHFDGKIVYNPDGSAYIIEDPELSEGETSLSDLPKIEPGCIVDSRDSNVVERQLEFPQIASAFYVSRNPSLYGALYGRLAAERARARPDAPVMHSYRVFSFRGGKETPRPQSPNPECPISVPVKPILMCFICKLSFGYAKSFVAHAQSDHSLSLLDTERDALSRENASAIIQCVGKDKEPLVSFLEPVGAAAPPRASVSGSPANMSELSSPSVDKRLDLMTPDRENDNMLPNGSCDDRRPSPPAWRPPRSMAESLMPQHSLISVAHPHTINASVQPRGSPNSSPPFQAAPPAFLSGTTIGVCPDHLGGRPSGADCPKCELILNSGRLGGPLAGMHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPEAETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQNGGNPGESNLPPSQHTPPGAHKPPLPHHSPLGQKPKPTFRCDVCNYETNVARNLRIHMTSEKHTHNMLVLQQNVKHMQTLSALHHRQQSQQQLESLLHFHGGDAPPPNPEAALADMAYNQALMIQLMTGGPGPSPPELGAHLDVGLNPDAMEPPPEPADPEPERTFHCCICNCFSTDSLEALGHHLAQDRTKIREQEILALVAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGPRNEWKLKFCGGVGTGGAGVGGVQVRCCACDYYTNSAHKLQLHAAGARHEAATLLLRHLRDCASRIPRDRPRVYRCALCGFGAPHRLPLLQHVRSVKHLQMEQIHQLQRRSEGKDPTPDVAELFQVIPQPPELPSPFDQQENDTKEPIDQKPELTQEQKMLRFLEQHQQQQQQQHQQQQQQQQQQLSQQSMQQSSSEKDEEEVTGSHTCPYCNFSCDSESKLHAHVNSIHSDTARHFICPLCQDAFKDRPALERHVMQIHSVNSEGLQRLLLLVDQSHWLNGGAQTQREDSRQGEEDREISSPRSEGSVDGETERCSTCNRTFRNVDELCHHQNESGHLELKQTPQGPGYVCWKKGCNRYFEAAHALQNHFKEAHARNSIANMSVSEKHVYKYRCNQCSLAFKTVEKLQLHSQYHVIRDATKCVLCGRSFRSILALQKHVETSHPELSEDELSAFKRSLASNPLLQSGQGTALDPATADLLRKEALRTPDDDLGELEDRDSSATAADESGHNDAENSDDSIIYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLTYPMEKYLDPNRPFKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNPPVSPGAGTAPSNLTLTPKSTSSEEDDRKRYKCNICKVAYTQGSTLDIHMRSVLHQTRAGKLQELAAAGHVDLTRPLVEQPDRNDPAKILQDVLSPKNTSPSSTSSGGPRSSPPARPGSPRSPRAGSASCERCHASFPTGELLDAHRATLCPFGDARAHSPLGDAEAAALDEMVAKGNPPKRNSQMYKQLLETFGFDLVMQYNENQRRKLQEEREMARAPSPPPPPPEEKPPDSETKSTCQHCNKEFSSVFVLKTHCEEVHKDKVPLEFLEQFAEQFKSEYERKSGAPNSPRAASPAPQGDRSPSPRGDSNSNFNENANGSGEAQAGALLAAQVQEMQAALNMLQLQQQLGQLHPMVAQMLSLGLPLGLNVGALAAMNLQPPLVPLMLPPPPFDAMPFSHDAQLKQQQLIQQQQQDASGCEQALYFVVTKQDEVLEDESWRLEGEASPAGHRSYLCVLFSSDLRMCWPCKRLATQSTAEVYDRPPATFIGYLASKPPHSLPFTPRNTLFYCSVTW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00776929;
90% Identity
iTF_00776929;
80% Identity
-