Basic Information

Gene Symbol
Zfhx3
Assembly
GCA_018231625.1
Location
DVQH01002392.1:1-9147[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.17 20 7.4 0.2 2 23 219 241 218 241 0.94
2 15 0.00032 0.038 16.0 1.8 2 23 435 457 434 457 0.95
3 15 7.9e-05 0.0093 17.9 0.7 1 23 489 513 489 513 0.92
4 15 0.012 1.4 11.0 0.4 1 22 561 582 561 585 0.91
5 15 0.46 54 6.0 4.8 1 23 984 1007 984 1007 0.96
6 15 0.014 1.7 10.8 0.0 1 23 1014 1037 1014 1037 0.95
7 15 0.023 2.7 10.1 3.8 2 22 1092 1112 1092 1115 0.90
8 15 0.94 1.1e+02 5.0 1.7 1 23 1127 1152 1127 1152 0.91
9 15 0.02 2.4 10.3 1.4 1 23 1170 1192 1170 1192 0.96
10 15 0.00047 0.055 15.4 0.2 2 23 1199 1221 1198 1221 0.96
11 15 0.00031 0.037 16.0 3.1 1 23 1327 1351 1327 1351 0.92
12 15 0.013 1.5 10.9 0.7 1 22 1371 1392 1371 1395 0.89
13 15 0.0013 0.15 14.1 0.2 1 23 1442 1466 1442 1466 0.93
14 15 2.8 3.3e+02 3.5 0.0 3 21 1541 1559 1540 1560 0.91
15 15 0.94 1.1e+02 5.0 3.5 2 19 1650 1667 1649 1672 0.91

Sequence Information

Coding Sequence
ATGCCCACGCCGCTGCAGGCCGGCGGCCCCGCTAGCGGCCCGCCCCCAGAGCGCAAGCGGCGCCGCAAGCGCGACGACCCTCAGAGCTCCGCCGCTCTCAGGcccgacgacgacgacgacggcGACATGAGCCCGGAGGAGGAGCCCCGCAACGTGCCGGCGGCTCCGGCGGCTCCTGCGCCCCCTGCCGGCCTTGCACCCACctcgccgcccgccgcgccggACGCCGTCGACCTCTCGAGACGGGACTCACCTCCACTCTCTTCGGACGTTGAACGCTTCGACGGCAAGATCGTGTACAATCCCGACGGTTCCGCCTACATCATCGAGGACCCGGAGATGTCTGAGGGCGAGACGAGCCTTCCGGACTTACCGAAGATTGAACCTGGGTGCATCGTCGACAGCCGAGACAGCAACATCGTCGAGAAACACCTCGAATTCCCTCAAATAGCGAGTGCATTCTACGTGTCGAGAAATTCCTCATTATATGGAGCTCTGTACGGTCGTTTAGCGGCGGAGCGTGCGCGGGCGCGGCCCGACGCCCCCGTCATGCATAGCTATCGAGTGTTCAGTTTCCGCGGCGGCAAAGACGTTCCCAGACCGCCATCGCCACCCGCCGAGTGCCCCGTCAGTGTGCCCGTCAAACCGATTcttatgtgttttatttgtaaattaagttTCGGATATGCTAAATCGTTCGTGGCGCACGCGCAATCGGACCATAGCTTATCATTACTAGATTCTGAAAGAGACGCTTTATCAAGAGAGAATGCGTCTGCGATCATACAATGTGTTGGAAAAGATAAGGAGCCATTAGTCTCATTCTTAGAACCCGTCGGTGCAGCGGCACCACCGCGTGCCTCGATATCGGGCAGTCCCGCCAATATGTCGGAACTGTCAAGCCCATCAGTCGAGAAAAGATTGGAAAATATGACGCCTGACCGAGACCACGATTCCTTATTACCGAACGGATCGTGCGACGACAGAAGACCGAGCCCACCGTCGTGGAGGCCGCCGCGTTCAATAGCGGAATCTCTGCTTCCACAACATTCCTTGATCTCCGTAGCGCATCCACATACGATAAATGCCTCCGTACAACCTCGCACTAGTCCTAATTCTTCACCACCATTTCAAACTGCCCCTCCGGCCTTCCTCTCGGGTACCACGATCGGAGTATGCCCGGATCATCTCGGCGGCAGACCATCGGGCGCTGAATGTCCAAAGTGCGAACTCATTTTGAATTCCGGAAGGCTTGGTGGACCGCTGGCCGGCATGCATAGCCGGAATTCCTGCAAGACATTAAAATGTCCCAAGTGTAATTGGCACTACAAATACCAAGAAACATTAGAAATACATATGAAGGAGAAACACCCGGAAGCTGAGACGAGTTGCATTTATTGTATAGCCGGGCAGCCACACCCTCGATTAGCCCGAGGCGAGACGTATACTTGCGGCTACAAGCCGTACAGGTGTGAAGTTTGCAACTATTCTACGACGACGAAAGGAAATCTCAGTATTCATATGCAGTCAGAtaagcatttaaataatatgcaaGAATTACAGAACGGTGGCAACCCCGGTGAAAGCTCGTTACCTCCGGCCCCACAGCACACGCCACCAGGCGGGCACAAACCGCCACTACCTCATCATTCGCCTCTGGGCCAGAAACCAAAGCCAACGTTTCGTTGTGATGTGTGTAATTACGAAACGAATGTTGCACGCAATCTTCGGATACACATGACCTCAGAGAAGCACACACATAATATGCTCGTACTACAACAGAATGTGAAGCACATGCAGACGTTGTCCGCGCTCCACCACAGACAGCAGAGTCAACAGCAGCTGGAGAGCTTGCTGCACTTCCACAGTGGCGAGGCGCCCCCTCCTAACCCAGAAGCGGCACTCGCTGACATGGCGTACAATCAAGCTCTTATGATACAACTTATGACGGGAGGACCCGGACCATCACCTCCCGAATTAGGAGCGCATCTCGACGTTGGATTGAACCCGGAGGCGATGGAACCGCCACCCGAACCGGCCGACCCCGAGCCGGAAAGAACTTTCCACTGTTGTATTTGCAACTGCTTCTCGACCGATTCCTTGGAAGCTCTCGGACATCATTTGGCGCAAGACCGCACAAAGATACGAGAGCAGGAGATATTGGCATTGGTCGCAGGACACTACGTGTGCAAATTATGCACATACAAAACTAACCTCAAAGCTAACTTTCAGCTTCATTGCAAAACTGACAAGCATCTTCAACGACTGCAACATGTTAATCATGTAAAAGAAGGTGGGCCACGAAACGagtggaaattaaaattctgcGGAGGAATAGGAACGAGTGGCGCCGGCGTTGGTGGAGTGCAAGTCCGATGCTGTGCTTGCGATTATTACACGAACTCCGCACATAAGTTGCAGCTACATGCTGCCGGTGCCCGGCACGAAGCTGCCACGTTGCTGCTAAGACACCTCCGCGAATGTGCGGCAAGGATTCCGCGCGACCGCGCTCGCGTCTACCGCTGCGCGCTCTGCGGTTTCGGGGCCCCACACCGCTTGCCCCTCTTACAGCACGTGCGCTCCGTTAAGCACTTGCAAATGGAACAAATACATCAACTGCAGCGTCGCTCTGAGGGCAAGGACCCCACGCCTGATGTCGCCGAGCTCTTCCAAGTGATTCCTCAGCCACCAGAGCATCCTAGTCCCTACGATCAACAAGAAGATAATAAAGAACTGATTGATCAAAAGCCTGAATTAACTCAAGAGCAGAAAATGATGCGGTTTTTGGAGCAACaccatcaacaacaacagcaacaccAACAACAGCAacttcaacaacaacagcagcagcagcaacagcaacaactACTACAACAACAACCTCCACCACAACTACAGCCTCAACAGGGTCCGAGTGAAAGGGAAGACGATCATGATACACCTGGACCGCACTCGTGTCCGTATTGCAATTTTAGCTGCGGTAGTGAGTCCCGATTACACTCTCATGTTAATTCTGTACACGGAGACACTTCTTCGCATTTTATTTGCCCGCTGTGCCAAGATGCCTTTAAAGATCGGCCGGCCCTTGAAAGGCATGTTATGCAAATACATTCAGTCAATTCGGAAGGCTTACAGCGGCTACTTCTCCTCGTCGATCAAAGTCATTGGCTAAATGGTGGCGCTCAACCAAAGAGAGAAGAGACGCGTCAAGGTGACGATGACCGAGAGATTTCCTCGCCACGATCTGAAGGCAGTGTCGACGGCGAAACAGAGCGATGCTTGACGTGCAACAGGACCTTCCGCAACGTCGATGAACTATGTCATCATCAAAATGAGTCCGGCCATCTGGAATTGAAACAAACTCCACAAGGGCCTGGATACTTCTGTTGGAAGAAAGGATGCAACAGATACTTTGATTCGGGTCACGCTTTACAAAATCACTTTAGAGAAGCACACGCTCGAAACTCGATTGCGAACATGTCCGTGTCAGAAAAACATGTGTATAAATTCAGATGTAACCAATGCAGTCTGGcctttaaaacaatagaaaaactaCAACTACATTCTCAATATCACGTAATACGCGACGCTACAAAATGCGCAATATGTGGACGAAGCTTCCGCTCTGTGTTAGCCCTACAGAAACACGTGGAAACTTCTCACTCCGACCTCTCTGAAGAGGAGCTTGCTGCATTTAAACGAAGTCTAGCATCAAATCCTTTGTTGCAATCTAATCAAGGCACCGCATTAGACCCCGCTATGGCCGACCTATTACGCAAAGAAGCTCTAAGAACTCCCGACGATGACTTAGGTGAAATAGATGATAGAGATTCAAGCGCCAATGTAGCTGACGAGTCGGGCCACAACGACGCTGAAAATTCTGATGATTCTATAGTATACAAAGACCAACAATTTTTGGAAGACTATTTGAATTCTCAGGCGATGGCCGAAGATTCATACAATGACCcgaatagaaaatataaatgccACCGATGCAAAGTGGCGTTCACCCGCCAATCTTATTTGACTGCTCATAATAAAACACTGTTACATAGAAAAGGCGAGAAATTAACGTATCCAATGGAAAAATATCTCGATCCTAATAGACCATTTAAATGCGATGTATGTAAGGAGTCGTTCacgcaaaaaaatattttactcgtACATTACAATAGTGTAAGTCATTTGCACAAATTAAAAAGGGCAATGCAAGAACAACAGAATAACAATAACCCGCCAGTGTCGCCCGGGGCCGGGACTGCTCCTTCTAATTTGACACTCACACCTAAGAGCACCTCTAGCGAAGAAGACGACCGAAAGCGATACAAGTGTAACATATGCAAAGTCGCTTATACGCAGGGCAGCACACTGGACATTCACATGAGGTCAGTGTTACACCAGACACGCGCGGGAAAACTACAGGAGCTCGCCGCGGCCGGTCACGTGGACTTGACGCGGCCCTTAGTAGAACAGCCCGATAAATCCGACCCCGCCAAAATTTTACAAGACGTGTTGTCGCCGAAAAATACATCCCCTTCTTCAACAAGCAGCGGGGGGCCCCGTTCTTCGCCCCCCGCGCGGCCAGGTAGTCCTCGCTCCCCTCGCGCAGGTAGCGCCGCGTGCGAGCGGTGCCACGCGTCATTTCCGAACGGAGAGCTACTCGACGCACATCGTGCGACTTCATGCCCGTTTAGCGATGCGCGGGCGCACTCGCCGCTAGGAGAAGCGGAGCAAGCCGCTCTGGACGAGATGGTAGCTAAGGGAAACCCGCCCAAACGAAACTCACAAATGTATAAACAATTACTCGAGACTTTCGGCTTCGATCTCGTCATGCAATACAATGAAAACCAACGGCGAAAATTGCAAGAAGAGCGCGAAATGGCGCGAGCGCCGAGCCCACCACCGCCGCCGCCCGAAGAAAAGCCCCCGGATGGTGAAACGAAGTCGACGTGCCAGCATTGTAATAAGGAGTTTTCTAGTGTGTTCGTTTTAAAAACTCACTGTGAAGAAGTGCATAAGGATAAAGTTCCTTTAGAGTTTTTGGAGCAATTCGCGGAGCAGTTCAAATCGGAATATGAACGAAAGTCGGGAGCGCCGAATTCACCTCGAGCCGCATCGCCCGCACCGCAAGACGAGAGGTCGCCTTCGCCGCGAGGAGATGCCAACGGCAGCTTTAATGAGAACGGGACCGGAGCGAGCGAGGCGCAGGCGGGCGCGCTGCTGGCCGCGCAGGTGCAGGAGATGCAGGCCGCTCTCAACATGCTACAGCTGCAGCAGCAGCTCGGGCAACTACACCCCATGATGGCTCAGATGCTGTCTCTGGGATTGCCTTTGGGACTGAACGTGGGCGCGTTGGCCGCCATGAACCTGCAGCCGCCGCTGGTGCCCCTCATGCTGCCACCTCCACCCTTTGATGCGATGCCGTTCTCTCACGACGCCCAGCTCAAACAACAACAGATTTTGCAGCAACAGCAACAG
Protein Sequence
MPTPLQAGGPASGPPPERKRRRKRDDPQSSAALRPDDDDDGDMSPEEEPRNVPAAPAAPAPPAGLAPTSPPAAPDAVDLSRRDSPPLSSDVERFDGKIVYNPDGSAYIIEDPEMSEGETSLPDLPKIEPGCIVDSRDSNIVEKHLEFPQIASAFYVSRNSSLYGALYGRLAAERARARPDAPVMHSYRVFSFRGGKDVPRPPSPPAECPVSVPVKPILMCFICKLSFGYAKSFVAHAQSDHSLSLLDSERDALSRENASAIIQCVGKDKEPLVSFLEPVGAAAPPRASISGSPANMSELSSPSVEKRLENMTPDRDHDSLLPNGSCDDRRPSPPSWRPPRSIAESLLPQHSLISVAHPHTINASVQPRTSPNSSPPFQTAPPAFLSGTTIGVCPDHLGGRPSGAECPKCELILNSGRLGGPLAGMHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPEAETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQNGGNPGESSLPPAPQHTPPGGHKPPLPHHSPLGQKPKPTFRCDVCNYETNVARNLRIHMTSEKHTHNMLVLQQNVKHMQTLSALHHRQQSQQQLESLLHFHSGEAPPPNPEAALADMAYNQALMIQLMTGGPGPSPPELGAHLDVGLNPEAMEPPPEPADPEPERTFHCCICNCFSTDSLEALGHHLAQDRTKIREQEILALVAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGPRNEWKLKFCGGIGTSGAGVGGVQVRCCACDYYTNSAHKLQLHAAGARHEAATLLLRHLRECAARIPRDRARVYRCALCGFGAPHRLPLLQHVRSVKHLQMEQIHQLQRRSEGKDPTPDVAELFQVIPQPPEHPSPYDQQEDNKELIDQKPELTQEQKMMRFLEQHHQQQQQHQQQQLQQQQQQQQQQQLLQQQPPPQLQPQQGPSEREDDHDTPGPHSCPYCNFSCGSESRLHSHVNSVHGDTSSHFICPLCQDAFKDRPALERHVMQIHSVNSEGLQRLLLLVDQSHWLNGGAQPKREETRQGDDDREISSPRSEGSVDGETERCLTCNRTFRNVDELCHHQNESGHLELKQTPQGPGYFCWKKGCNRYFDSGHALQNHFREAHARNSIANMSVSEKHVYKFRCNQCSLAFKTIEKLQLHSQYHVIRDATKCAICGRSFRSVLALQKHVETSHSDLSEEELAAFKRSLASNPLLQSNQGTALDPAMADLLRKEALRTPDDDLGEIDDRDSSANVADESGHNDAENSDDSIVYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLTYPMEKYLDPNRPFKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNPPVSPGAGTAPSNLTLTPKSTSSEEDDRKRYKCNICKVAYTQGSTLDIHMRSVLHQTRAGKLQELAAAGHVDLTRPLVEQPDKSDPAKILQDVLSPKNTSPSSTSSGGPRSSPPARPGSPRSPRAGSAACERCHASFPNGELLDAHRATSCPFSDARAHSPLGEAEQAALDEMVAKGNPPKRNSQMYKQLLETFGFDLVMQYNENQRRKLQEEREMARAPSPPPPPPEEKPPDGETKSTCQHCNKEFSSVFVLKTHCEEVHKDKVPLEFLEQFAEQFKSEYERKSGAPNSPRAASPAPQDERSPSPRGDANGSFNENGTGASEAQAGALLAAQVQEMQAALNMLQLQQQLGQLHPMMAQMLSLGLPLGLNVGALAAMNLQPPLVPLMLPPPPFDAMPFSHDAQLKQQQILQQQQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00776929;
90% Identity
iTF_00776929;
80% Identity
-