Tpit025984.1
Basic Information
- Insect
- Thaumetopoea pityocampa
- Gene Symbol
- Zfhx3
- Assembly
- GCA_017165845.1
- Location
- WUAW01038514.1:34444-44768[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.038 3.5 8.9 0.2 2 23 221 243 220 243 0.94 2 16 0.00022 0.021 16.0 1.8 2 23 436 458 435 458 0.95 3 16 5.5e-05 0.0051 17.9 0.7 1 23 490 514 490 514 0.92 4 16 0.0082 0.76 11.0 0.4 1 22 562 583 562 586 0.91 5 16 7.7 7.2e+02 1.7 0.2 1 23 841 865 841 865 0.87 6 16 0.9 83 4.6 5.3 1 23 986 1009 986 1009 0.94 7 16 0.013 1.2 10.4 0.1 1 23 1016 1039 1016 1039 0.95 8 16 0.012 1.1 10.5 1.8 2 22 1094 1114 1094 1117 0.90 9 16 0.21 20 6.6 0.6 1 23 1129 1154 1129 1154 0.94 10 16 0.01 0.93 10.8 1.3 1 23 1172 1194 1172 1194 0.97 11 16 0.0012 0.11 13.6 0.3 2 23 1201 1223 1200 1223 0.96 12 16 0.00022 0.02 16.0 3.1 1 23 1329 1353 1329 1353 0.92 13 16 0.0089 0.83 10.9 0.7 1 22 1373 1394 1373 1397 0.89 14 16 0.00089 0.083 14.1 0.2 1 23 1444 1468 1444 1468 0.93 15 16 0.6 56 5.2 0.1 2 20 1539 1557 1539 1559 0.93 16 16 0.019 1.8 9.9 1.6 2 23 1647 1669 1646 1669 0.92
Sequence Information
- Coding Sequence
- ATGCCAACGCCGCTGCagcccggcggccccgctagcGGCCCGCCCCCGGAGCGCAAGCGGCGCCGTAAACGCGACGATCCACAGAGTTCCGCCGCGCTCGAACCCGACGACGACGACGGCGAGATGAGCCCCGAGGAAGAACCGCGTAATGCACCTGCGACTCCTGCTGCGCCCACTCCCGCGCCCTCCTCAGCGCCCGCGCCCACCTCGCCGCCTGTGGCGCCTGACGCCGTCGACCTCACCTCACATCGGGACTCTCCTCCTCTTTCCTCCGATGTCGAAAGATTCGATGGCAAGATCGTCTACAATCCGGATGGATCAGCATACATCATCGAGGACGTCGAGCTGTCTGAAGGTGAAACTAGTATACCCGACTTGCCCAAAATAGAACCCGGGTGTATTGTTGACAGTCGAGATAACAACGTTGTAGAGAGACAGCTCGAGTTCCCGCAAATAGCCAGTGCATTCTACGTCTCCAGGAATTCTTCATTGTACGGTGCATTGTACGGAAGACTTGCAGCTGAGCGGGCGCGGGCGAGGCCTGACGCCCCTGTTATGCACAGTTATCGAGTATTCAGTTTTCGTGGCGGTAAAGATCCCCAAAGGCCACCATCCCCGCCTGCTGAATGTCCTATCAGCGTACCAGTTAAACCGATCCTTATGTGTTTTATCTGTAAATTGAGTTTTGCCTATGCAAAATCCTTTGTAGCGCATGCCCAATCTGATCATAGTTTATCGTTACTGGATTCAGAAAGAGACGCGTTATCAAGAGAAAATGCTTCAGCTATAATACAATGCGTAGGCAAAGACAAAGAACCCCTAGTCTCATTTCTAGAACCTGTAGGTGCGGCTCCACCACGAGTGTCAAATTCGGGTAGCCCTATGAATATGACAGAACTATCCAGTCCTTCAGTGGAAAAAAGACATGACCTAATGATACCTGATAGGGAAAATGAATCAATGTTGCTAAATGGCACATGTGACGATAGAAAACCAAGTCCTACGGCTTGGAGACCACCGCGGTCAATAGCTGAATCCCTAATGCCACAGCATTCTTTAATCTCTGTGGCACATCCACACACAATAAATGCGTCAGTACAACCACGTGTGAGTCCAAATTCTTCCCCACCGTTTCAACCAACTCCACCGGCTTTTTTATCCGGAACCACAATAGGTGTATGTCCAGATCATTTAGGAGGACGACCATCTGGTGCCGAATGTCCGAAATGTGAGCTTATCTTAAATTCGGGAAGATTAGGTGGTCCTCTGGCCGGGATGCATAGTCGAAATTCCTGCAAAACACTGAAATGTCCGAAGTGTAACTGGCATTACAAATATCAAGAGACCTTAGAGATACACATGAAAGAAAAGCACCCCGAAGCCGAAACtagttgtatttattgtatagcAGGTCAACCACACCCGCGGCTCGCAAGAGGTGAAACTTATACTTGTGGATATAAACCATACCGTTGCGAAGTGTGCAATTATTCAACTACGACGAAGGGAAATCTTAGTATACATATGCAATCTGATAAACACTTGAATAATATGCAAGAGCTACAGAATGGTGGTAATCCAGGAGATACAAGTTTACCTCCTGCACCACAACATACTCCTCCAGGTCCACATAAACCACCATTACCACATCATTCGCCATTAGGCCAAAAACCAAAGCCGACTTTCCGATGCGATGTATGCAATTATGAAACAAATGTCGCACGCAATCTGAGAATACACATGACTTCAGAAAAACATACGCATAATATGCTAGTGTTACAACAAAACGTTAAACACATGCAGACGTTGTCCGCTTTACACCACAGACAACAAAGTCAACAACAACTTGAGAGTTTGCTGCATTTTCATGGGCCAGATGCCCCACCACAGAATCCAGAAGCCGCATTGGCTGATATGGCATATAGTCAAGCGTTAATGATCCAACTTATAACTAGTGGCTCGGGACCGTCTCCACCTGAACTGGGAGCCCACCTTGACGTTGGCTTAAATCCTGAGGCAATGGAACCACCACCAGAACCGGCTGATCCAGAGCCAGAAAGAACGTTCCATTGTTGCATATGCAATTGCTTTTCGACAGACTCCTTAGAAGCTCTCGGTCACCATCTAGCACAAGATCGTACAAAGATCAGGGAGCAGGAAATTTTGGCTTTAGTGGCAGGTCATTATGTGTGCAAACTTTGTAcgtataaaacaaatttaaaagcaaactttCAACTTCATTGTAAAACTGACAAGCACTTGCAAAGGCTACAGCATGTTAACCACGTGAAGGAAGGAGGTCCCAGGAATGAgtggaaattaaaattttgcagTGGTGTAGGCACGGGTGGTGCAAGCATCGGTGGTGTTCAAGTCAGATGCTGTGCTTGCGATTATTATACAAATTCAGCACATAAGCTACAGTTACATTCAGCAGGAGCTAGACACGAGGCTGCAACCTTACTATTGAGACATCTCCGCGACTGTTCTTCTAGGATACCTCGTGAACGTCCAAGAGTGTACCGATGTGCTCTCTGTGGCTTTGGTGCTCCTCATCGCCTCCCTCTTCTCCAACATGTGCGGTCGGTAAAACATTTACAGATGGAACAAATCCATCAGCTCCAACGACGTTCTGAAGGCAAAGATCCAACGCCTGATGTCGCTGAACTATTCCAAGTTATACCACAGCCTTCAGACTTATCCAGCCAATTGTCCAGTCCATATGATCAACAGGAAAATGATAATAAAGAGCAAATTGACGTGAAGCCGGAGTTAACTCAGGAACAAAAGTTGATGAGATTTTTAGAACAACACCAACAGCCGCAACAACAAGCCCAACAATTAGTGCAACAACAAATACAACAACAGATCCAGCAACAAGCCCAACAACAAACCCAACAACAATCTCAACAAGGTTCCAGTGATCGGGAGGAAGAGTGTGACACGCCAGGACTACATACATGTCCATACTGCAATTTTAGTTGCACAAGCGATACTCGCTTGCACGCCCATGTTACATCCATTCACGGCGATAGCAATCGACGCTTCATTTGCCCGCTATGCCAAGATGGCTTTAAAGAGCGGTCAGCTCTTGAACGTCATGTCATGCAAATTCATTCCGTAAATTCCGAAGGACTTCAAAGACTATTAATGCTAGTTGACCAAAGCCATTGGTTAAATGGTGGATCACAAACTCAGAGAGATGAATCTCGACTAGGGGATGATGAACGAGAGATTTCTTCACCTCGATCGGAAGGGAGCGCTGACGGAGAAACAGAGAGATGTTCAGCTTGCAATCGCACTTTCCGTAATGTGGATGAATTGTGTCAACATCAAAATGAATCAGGTCATTTAGAACTGAAACAAACACCACAGGGTCCAGGATACGTATGTTGGAAAAAAGGATGCAATCGCTATTTTGATGCAGCTCATGCACTTCAAAATCATTTCAGAGAAGCACACGCCCGTAACTCTACCGCGAATATGTCAGTATCAGAGAAACACGTTTATAAGTACCGTTGCAATCAGTGCAGCTTAGCATTCAAAACTATCGAAAAATTGCAACTGCATTCACAATATCACGTTATTAGAGATGCCACCAAATGCGTACTTTGCGGAAGGAGCTTTAGATCTGTGTTGGCTCTTCAGAAACATGTTGAAACATCCCACTCTGAACTATCTGAAGAAGATCTGGCAGCATTTAAACGAAGCTTAGCCTCAAATCCTCTACTTCAGTCTCCACAAAGCACCGTTTTAGATGCAAACACTGCTGAGCTACTACGAAAAGAAGCTCTTAGAACTCCTGATGATGAACTCGCCGATATAGAAGACCGAGATTCTAGTGCTACAGTCGCCGATGAGTCCGGACATAATGATGCAGAAAATTCTGATGATTCTATTGTTTATAAAGATCAGCAATTTCTCGAAGATTATTTAAACTCTCAAGCTATGGCGGAAGATTCGTACAATGATCCAAACCGAAAGTACAAGTGTCATCGTTGTAAAGTAGCATTTACTCGCCAGTCTTATTTGACAGCACACAATAAAACATTGCTGCACAGGAAAGGTGAAAAATTAACCTACCCAATGGAAAAGTATCTCGATCCGAACAGGCCGTTCAAATGCGACGTTTGTAAAGAATCTTTTACACAAAAGAATATTTTGCTAGTTCATTACAACAGCGTAAGTCATTTGCATAAATTAAAACGAGCTATGCAAGAACAACAGAATAATAACAATTCACCCGTATCACCCGGGGTGGGATCAGCGCCATCTAATTTGACACTCACTCCCAAAAGTACATCGAGCGAAGAGGACGATCGAAAGCGCTACAAATGTAATATTTGCAAAGTTGCATACACACAAGGCAGTACATTAGATATACACATGAGATCTGTGTTGCACCAGACTCGGGCGGGAAAACTACAAGAACTTGCCGCGACCGGACAAATCGACATAACAAAACCTCTTTTCGAGCAGCCCGATAAAGTCGATTCTgcaaaaatgttacaagatgtattGTCACCGAAAAATACTTCCCCTTCATCAACTAGTAGTGGGGGATTACGGTCCACGCCTACCGCCCCACCAGGTAGTCCGCAGTCAGTTATAAACACTTGTGAGCGGTGTCAAGCATCTTTTATAAATGGAGAACTCTTAGAAGCACATCGCACGTCCTCGTGCCCGTGTAGCGATGCTCGAACTCAATCTCCCAATGGAGAATCTGAGGCTACTCTGGATGAAATGTACTCGAAGAGTAGTGGCACAAAACGAAATGTTCATATGCATAAACAGTTATTAGAAAACTACGGCCAAGATTTAGTAAtgcaatataatgaaaatcagagaaaaaaattacaagaaatagaaataatacgtGCACCGAGTCCACCGCCCCCACCTCCCGAGGAAAAGCCCCCAGATGGTGACATCAAATCTACATGTTCGCACTGCAATAAGGAATTTTCTAGCgtgtttgttttaaaaactcATTATGAAGAAGTTCATAAAGATACAGTCCCGCAGGAGTTTCTGGAGCTGTTTGCAGAAAAGTTCAAAACTGAATATGAAAGAAAATCTGGTGCGCTTAATTCACCACGCGCCGCCTCTCCTGCGCCTCAATGTGATCGGTCACCGACCCCGAGCGGTGACAACAGTAACTTCAGTGCTAATGGAAACGCTCAGGGAGAAACTCAGGCGGGAGTCTTACTACAAGAAATGCAAAATGCGCTAAACTTTATGCAACTACAACAACAACTCGGACAAATAAATCAGCTGTTTGCACTGGGCTTACCTCTGGGCCTAAATATGGGAGCAATCGCAGCCATGAATTTGCAACCACCCTTAGTGCCTCTGATGCTGCCTCCACCACCATACGACGCTATGTCATTTGCACACGACGCTCAAATTAAACAGCAACAAATAttgcaacaacaacaacaacagTTTGCAGCATAA
- Protein Sequence
- MPTPLQPGGPASGPPPERKRRRKRDDPQSSAALEPDDDDGEMSPEEEPRNAPATPAAPTPAPSSAPAPTSPPVAPDAVDLTSHRDSPPLSSDVERFDGKIVYNPDGSAYIIEDVELSEGETSIPDLPKIEPGCIVDSRDNNVVERQLEFPQIASAFYVSRNSSLYGALYGRLAAERARARPDAPVMHSYRVFSFRGGKDPQRPPSPPAECPISVPVKPILMCFICKLSFAYAKSFVAHAQSDHSLSLLDSERDALSRENASAIIQCVGKDKEPLVSFLEPVGAAPPRVSNSGSPMNMTELSSPSVEKRHDLMIPDRENESMLLNGTCDDRKPSPTAWRPPRSIAESLMPQHSLISVAHPHTINASVQPRVSPNSSPPFQPTPPAFLSGTTIGVCPDHLGGRPSGAECPKCELILNSGRLGGPLAGMHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPEAETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQNGGNPGDTSLPPAPQHTPPGPHKPPLPHHSPLGQKPKPTFRCDVCNYETNVARNLRIHMTSEKHTHNMLVLQQNVKHMQTLSALHHRQQSQQQLESLLHFHGPDAPPQNPEAALADMAYSQALMIQLITSGSGPSPPELGAHLDVGLNPEAMEPPPEPADPEPERTFHCCICNCFSTDSLEALGHHLAQDRTKIREQEILALVAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGPRNEWKLKFCSGVGTGGASIGGVQVRCCACDYYTNSAHKLQLHSAGARHEAATLLLRHLRDCSSRIPRERPRVYRCALCGFGAPHRLPLLQHVRSVKHLQMEQIHQLQRRSEGKDPTPDVAELFQVIPQPSDLSSQLSSPYDQQENDNKEQIDVKPELTQEQKLMRFLEQHQQPQQQAQQLVQQQIQQQIQQQAQQQTQQQSQQGSSDREEECDTPGLHTCPYCNFSCTSDTRLHAHVTSIHGDSNRRFICPLCQDGFKERSALERHVMQIHSVNSEGLQRLLMLVDQSHWLNGGSQTQRDESRLGDDEREISSPRSEGSADGETERCSACNRTFRNVDELCQHQNESGHLELKQTPQGPGYVCWKKGCNRYFDAAHALQNHFREAHARNSTANMSVSEKHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRDATKCVLCGRSFRSVLALQKHVETSHSELSEEDLAAFKRSLASNPLLQSPQSTVLDANTAELLRKEALRTPDDELADIEDRDSSATVADESGHNDAENSDDSIVYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLTYPMEKYLDPNRPFKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNSPVSPGVGSAPSNLTLTPKSTSSEEDDRKRYKCNICKVAYTQGSTLDIHMRSVLHQTRAGKLQELAATGQIDITKPLFEQPDKVDSAKMLQDVLSPKNTSPSSTSSGGLRSTPTAPPGSPQSVINTCERCQASFINGELLEAHRTSSCPCSDARTQSPNGESEATLDEMYSKSSGTKRNVHMHKQLLENYGQDLVMQYNENQRKKLQEIEIIRAPSPPPPPPEEKPPDGDIKSTCSHCNKEFSSVFVLKTHYEEVHKDTVPQEFLELFAEKFKTEYERKSGALNSPRAASPAPQCDRSPTPSGDNSNFSANGNAQGETQAGVLLQEMQNALNFMQLQQQLGQINQLFALGLPLGLNMGAIAAMNLQPPLVPLMLPPPPYDAMSFAHDAQIKQQQILQQQQQQFAA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00776929;
- 90% Identity
- -
- 80% Identity
- -