Haxy001933.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- Hr39
- Assembly
- None
- Location
- chr3:50793185-50853791[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.045 1.2e+03 -0.9 3.6 52 132 185 267 97 300 0.67 2 4 1.4e-08 0.00036 20.6 0.1 1 23 371 393 371 403 0.89 3 4 0.00021 5.4 6.8 0.0 60 125 402 468 390 483 0.67 4 4 1.1e-72 2.9e-68 231.7 0.1 202 408 496 697 473 697 0.96
Sequence Information
- Coding Sequence
- ATGGCCGCCGAGATGAGGTCCCCCAATATATCAGTCACTCCAATCAATATGGAGGTTTATCACCAGCATGTCCCCTCCTCGTCTTCAGGGGAACCACCACCGGATGTCGCAGATGCGGAAGTTGCCCGTATCGAGTTCCATAGTGCCTCCGTGAACATGCGCAGTAAAAATAAAGAAGACGATGGGGATCGTCCACCGCGGCCGATGTCTTGGGAGGGGGAGTTGTCGGACAACGAAAGAGATATGTGCGTGGATGAAGAGTCTATAGATCAGATACCAGAAAACCTTTCCATACCCCAGCAAACAAAACAAACATCAACGATCATCTTAGATTCTAAGGACAGCCCTATACTAAGGATGAAGCAACCTCCTATGGGCAACTATTCACTTCATAGCACCCCCAGTCATTCGCCCCTCCTAGGACAACGTCACCCCATCACCGGTGTTCCGATGATAAGCCATAAAGACATGATGCACAAAGCTCTCAACGTTCCACCTACCCCGAGTCCCGACTCTGCTATTCATTCCGCCTACAGTGTGTTCAGTTCGCCAAATCAGAGTCCCCTTACTCAAAGACACATAAACTTAACCCCAAACTTGAGTCGGAACAATAGTGATGCATCGCATTCCAGTTGTTGCAGCTATTCTAGTGTTTCGGTATCAGTGTCGCCCACGCAACAGTTTTCACCAACTCATAGTCCGATACAGGGTCGTCATATGCACAACATCCATGGTAGCCCACTCCATCACAACGTACTTTATCGTAGTCTTCAAGAAGATTCACCCTCGCCGTATTCCAATGATAACGATGGCCTGGATGAAGTAGAAGAAAAGACTGGCCTACTCCACACCTCACTGCCCGCTCAACCAGGCATCTCAAGACAGCAACTCATCAACAGCCCCTGTCCTATATGCGGCGACAAGATATCTGGTTTTCACTACGGTATTTTCAGCTGTGAATCGTGTAAAGGTTTCTTCAAGAGAACAGTGCAAAACCGAAAGAACTACGTTTGTCTGAGAGGCGCTTCTTGTCCAGTTACAGTGGCTACCAGAAAAAAATGTCCAGCGTGCAGGTTCGAGAAGTGCTTGCAATGTGGTATGAAGCTGGAAGCCATCAGAGAAGACAGGACCAGGGGTGGTCGCTCAACATACCAGTGTTCATATTCTCTTCCACCGTCGTTAACAAATCACTCCGACTTCAGGAATAGTTCCTCGGATATGAGACATACTATGAATGACCATTCTTTAACTGTTAAATTAGAACCTTCAGAATTTAGTCATTCTCACCATCGGCGAAGTGCAATCCCAGGCTCAAAAGGAGTCCCACCATTATTGCAGGAAATAATGGATGTGGAGCACCTTTGGCATTATAATGAAACTGAACTTCAAAAACTCAACACTGAAGGACACTTGGGCAAGGAGAGCGGAAGTGGCGCAGTACATAATTTGGCCAATCATCCTCTTCTAGCTGGTACAGCTATAGCTTCATCTGAAACCAGTCCTGACTTTGTTGCTAATCTTTGCCATATAGCTGATCATAGACTGTACAAAATAGTCAAATGGTGCAAAAGTTTGCCATTATTTAAAAATATTTCGATTGATGATCAAATTTGTCTTCTCATAAATTCATGGTGTGAGTTACTCTTATTCTCTTGCTGTTTTCGATCAATGTCAACTCCAGGAGAAATAAGAGTGTCACTTGGAAAAAGTATCACTTTAAACCAAGCTAGGGAAATGGGTATGCAACCGTGTATAGAAAGAATGCTGAATTTTACTGAACAACTTAGGAGGCTAAGGGTAGACCAATATGAGTATATTGCAATGAAAGTTATTCTACTTTTAACTTCTGATACTTCTGAATTGAAAGAAGCTGAAAAGGTTAGAATATCTCAAGAGAAAGCATTGAAAGCTTTACAAGATTATACCCTAATTCATTATCCAGAAAGTCCTTCTAAATTTGGGGAGTTGTTACTTCGAATACCTGAACTACAACGAACCTGTCAGGTTGGGAAAGAAATGCTAACTATAAAATCAAAAGATGGAGAAGGACCTAGCTTCAACTTATTGATGGAGCTTCTACGTGGGGACCACTAA
- Protein Sequence
- MAAEMRSPNISVTPINMEVYHQHVPSSSSGEPPPDVADAEVARIEFHSASVNMRSKNKEDDGDRPPRPMSWEGELSDNERDMCVDEESIDQIPENLSIPQQTKQTSTIILDSKDSPILRMKQPPMGNYSLHSTPSHSPLLGQRHPITGVPMISHKDMMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHINLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHNIHGSPLHHNVLYRSLQEDSPSPYSNDNDGLDEVEEKTGLLHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHSDFRNSSSDMRHTMNDHSLTVKLEPSEFSHSHHRRSAIPGSKGVPPLLQEIMDVEHLWHYNETELQKLNTEGHLGKESGSGAVHNLANHPLLAGTAIASSETSPDFVANLCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLNQAREMGMQPCIERMLNFTEQLRRLRVDQYEYIAMKVILLLTSDTSELKEAEKVRISQEKALKALQDYTLIHYPESPSKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_00764843; iTF_01023937; iTF_00349154; iTF_01024162; iTF_00349156; iTF_00965228; iTF_00965262; iTF_00349332; iTF_00998897; iTF_00998722; iTF_00394551; iTF_00394631; iTF_00020318; iTF_00020580;
- 80% Identity
- iTF_00764843;