Csep002950.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- Hr39
- Assembly
- GCA_907165205.1
- Location
- OU015578.1:26733545-26767815[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.17 3.7e+03 -1.8 4.9 51 132 185 268 86 295 0.60 2 4 2.8e-08 0.00061 20.6 0.0 1 23 372 394 372 403 0.89 3 4 0.0044 95 3.5 0.0 62 120 406 461 392 475 0.62 4 4 2.3e-72 5e-68 231.6 0.2 205 408 501 699 482 699 0.96
Sequence Information
- Coding Sequence
- ATGGCCGCCGAGATGAGGTCCCCCAATATATCAGTAACTCCGATCAATGTGGAGGTCTACCACCAGCCAATCCCCTCCGCCACTCCATCGTCCGGTGAACCACCCCCGGACGGCGCAGACGCGGAAGTAGCCCGCATAGACTTCCACAGCGCCAACGTGAACATGCGCAGTAAAAAGGAAGAGGGGGAGAGTCATCCGCCGCGGCCGATGTCTTGGGAGGGGGAGTTATCTGACCACGAAAGGGATATGTGCGTGGATGAGGACTCCTCGCATCAGATCCCGGAGAATCTTTCCATGTCTCAACAATCGAAACAAACATCGACCATCATCTTAGAAACCAAGGATAGTCCCATATTAAGGCTGAAACAACCCCCGATGGGAAATTATTCACTGCACAGCACCCCCAGCCATTCGCCCCTGCTAGGACAGCGTCACCCTATCACCGGCGTACCGATGATGAGCCATAAAGACATGATGCATAAAGCCCTCAACGTTCCTCCAACCCCGAGTCCCGATTCCGCAATCCATTCCGCCTACAGTGTGTTCAGTTCGCCCAATCAGAGTCCCTTAACTCAAAGACACATAAACTTAACCCCGAATCTGAGTCGGAACAATAGTGACGCTTCGCATTCCAGCTGCTGCAGCTATTCTAGTGTTTCGGTTTCAGTGTCGCCGACGCAGCAATTTTCGCCGACGCATAGTCCTATACAGGGTCGTCATATGCACAATGTCCACGGTAGCCCTCTACATCACAACGTGCTATATCGCAGCCTCCAAGAAGACTCGCCTTCTCCTTACTCGAACGAAAACGACGTCTTGGACGAGGTGGAGGAAAAGACCGGCCTACTTCACAACTCCCTGCCTGCCCAACCGGGCATCTCGAGGCAACAGCTGATCAACAGCCCCTGTCCGATATGCGGCGACAAAATATCAGGATTTCACTACGGCATCTTCAGCTGCGAATCCTGCAAGGGTTTCTTCAAGAGAACAGTACAAAACCGAAAGAACTACGTATGCCTGAGGGGTGCCTCTTGTCCGGTCACGGTGGCAACTAGGAAAAAATGCCCCGCGTGCCGATTCGAGAAGTGTCTGCAGTGCGGCATGAAGTTAGAAGCAATCAGAGAAGATAGAACAAGGGGCGGTCGCTCAACGTACCAGTGTTCATATTCCCTTCCGCCATCATTGACGAATCATTCCGACTTTAGGAGTAGTTCATCGGACTTGCGACACAATATGAACGATCATTCCTTAACAGTTAAATTGGAACCTCCGGAATTTGGAAGTAGTCATCATAGACGAAGCGCAATCCCAGGTTCTAAAGGCGTCCCACCATTATTGCAGGAAATAATGGATGTGGAGCACCTTTGGCATTACAACGAATCCGAGCTTCAAAAACTGAACACAGAGGGTCACTTGGGTAAAGAAGGCGGAAGTGGTGCTGTTCATAATCTGGCCAATCATCCTCTTCTCGCTGGTACGGCTCTGGCCGGTTCTACGGAAACGAGTCCTGACTTTGTTGCCAACCTGTGCAATATTGCCGATCACAGACTGTACAAAATAGTTAAATGGTGTAAAAGTCTGCCCTTATTCAAGAATATCTCTATCGATGATCAAATTTGCCTTCTTATAAATTCCTGGTGTGAGCTTCTCTTGTTTTCTTGCTGTTTTCGATCCATGTCAACGCCGGGAGAAATAAGGGTGTCCCTTGGGAAGAGCATCACTTTGAACCAAGCCAGGGATATGGGTATGCAGGCTTGTATAGAGAGAATGTTGAATTTCACAGAACAACTCAGAAGGCTAAGAGTAGACCAATATGAATACATTGCCATGAAAGTTATTCTTCTTTTAACTTCAGACACTTCCGAACTCAAAGAAGCCGAAAAAGTTAGGATATCACAGGAAAAGGCACTGAAAGCTTTACAGGATTACACACTAGTTCATTATCCGGAAAGTCCCTCCAAATTCGGGGAGTTGTTACTGAGAATACCCGAGCTGCAACGAACTTGTCAGGTTGGAAAGGAGATGCTTACGATAAAATCAAAAGATGGGGATGGGCCAAGCTTCAACTTACTGATGGAGCTCCTCCGTGGGGACCACTAA
- Protein Sequence
- MAAEMRSPNISVTPINVEVYHQPIPSATPSSGEPPPDGADAEVARIDFHSANVNMRSKKEEGESHPPRPMSWEGELSDHERDMCVDEDSSHQIPENLSMSQQSKQTSTIILETKDSPILRLKQPPMGNYSLHSTPSHSPLLGQRHPITGVPMMSHKDMMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHINLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHNVHGSPLHHNVLYRSLQEDSPSPYSNENDVLDEVEEKTGLLHNSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHSDFRSSSSDLRHNMNDHSLTVKLEPPEFGSSHHRRSAIPGSKGVPPLLQEIMDVEHLWHYNESELQKLNTEGHLGKEGGSGAVHNLANHPLLAGTALAGSTETSPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLNQARDMGMQACIERMLNFTEQLRRLRVDQYEYIAMKVILLLTSDTSELKEAEKVRISQEKALKALQDYTLVHYPESPSKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_00764767;
- 80% Identity
- iTF_00349154;