Mdis000170.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- Hr39
- Assembly
- GCA_030674115.1
- Location
- JARTUT010000001.1:3053698-3063529[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.17 4.2e+03 -1.8 3.4 47 91 188 230 89 299 0.59 2 4 2.6e-08 0.00064 20.7 0.1 1 24 375 398 375 409 0.88 3 4 0.0075 1.8e+02 2.7 0.0 57 121 405 465 393 476 0.62 4 4 8.2e-73 2e-68 233.1 0.1 205 408 504 702 483 702 0.96
Sequence Information
- Coding Sequence
- ATGGCCGCCGAGATGAGGTCCCCCAACATATCAGTGACTCCGATCAATGTGGAGGTCTACCACCAGCCAGTGCCGTCCTCCACAACGTCTTCTGGCGAGCCGCCCCCAGACGGCGCAGATGCGGAAGTCGCGCGCATCGAGTTCCACAGCTCTTCCGTAAACATGCGCAGTAAGAATAACGATGAAGAGGGGGGAAGTCATCCGCCGCGGCCGATGTCTTGGGAGGGGGAACTGTCTGACCACGAGAGGGACATGTGCGTAGACGAGGACTCTTCGCATCAGatcCCGGAAAATCTTTCCATTATACAGCAATCGAAACAAACATCGACCATCATCGTAGATTCTAAGGACAGCCCCATATTGAGGCTAAAACAACCCCCGATGGGCAACTATTCACTCCACAGCACCCCCAGCCATTCGCCCCTTCTTGGACAACGTCATCCTATCACCGGTGTTCCGATAATGAGCCATAAAGACATGATGTACAAAGCCCTAAACGTACCTCCAACCCCAAGCCCCGATTCTGCCATCCATTCCGCCTACAGTGTGTTCAGTTCACCTAATCAGAGCCCTCTTACTCAAAGACATATAAACTTAACCCCCAATTTGAGTCGGAACAATAGTGACGCATCGCATTCCAGTTGCTGTAGCTACTCTAGTGTTTCAGTTTCAGTGTCGCCAACGCAACAGTTCTCACCCACTCATAGCCCTATACAGGGTCGTCATATGCACAATGTTCATGGAAGCCCACTACATCACAACGTATTATACCGTAGCCTTCAAGAAGACTCCTCCCCCTCGCCTTACACCAATGAAAACGATGGCCTTGACGAGGTAGAGGAAAAGACCGGCCTACTCCACACCTCCCTACCTGCGCAGCCTGGAATATCAAGACAGCAGCTGATCAATAGTCCTTGTCCCATTTGCGGCGATAAAATATCAGGGTTTCACTATGGCATCTTCAGCTGCGAATCCTGCAAGGGTTTTTTCAAGAGGACTGTACAGAACCGAAAGAATTACGTATGCTTGAGAGGAGCGTCTTGCCCGGTCACAGTGGCGACGAGGAAGAAATGCCCGGCTTGCAGATTCGAGAAGTGCCTGCAGTGCGGTATGAAGTTGGAAGCAATCAGAGAAGATAGAACAAGAGGTGGTCGCTCAACGTATCAGTGTTCATATTCACTCCCCCCGTCATTAACGAATCATTCAGACTTCCGAAGTAGTTCGACGGAATTACGACATAACATGGGTGATCACTCCTTAACGGTCAAATTAGAACCTCCGGAATTTGGAAGTAGTCATCATAGAAGAAGTGCAATACCAGGATCCAAAGGAGTCCCTCCGTTATTACAGGAAATAATGGATGTGGAGCACCTATGGCACTACAACGAAACCGAACTTCATAAACTAAATACAGACGGCCACTTGGGTAAAGAAGGAGGCAGTGGGGCGGTGCATAACCTGGCCAATCATCCACTCCTTGCCGGTACGGCTCTGGCAGGTTCGACTGAAACAAGCCCCGACTTTGTTGCCAACCTTTGCAATATAGCCGATCATAGACTCTACAAAATAGTCAAATGGTGTAAAAGTCTACccctatttaaaaatatttcgATTGATGATCAAATTTGTCTTCTTATTAATTCTTGGTGCGAGCTACTTCTTTTCTCTTGCTGTTTTCGTTCGATGACAACACCAGGAGAAATAAGGGTATCTCTCGGAAAGAGTATAACGTTGAGTCAAGCCAGGGACATGGGTATGCAAGCGTGTATAGAGAGAATGTTGAATTTCACAGAACAACTCAGGAGGCTGAGGGTAGATCAGTACGAATACATTGCCATGAAAGTTATTCTTCTTCTGACTTCAGATACATCTGAACTGAAGGAAGCGGAAAAAGTAAGAATATCCCAAGAGAAAGCACTGAAAGCTTTACAAGACTATACACTAGTTCATTATCCAGATAGTCCCTCGAAATTTGGGGAATTATTACTGAGGATACCAGAATTACAAAGAACTTGTCAGgTTGGAAAGGAGATGTTAACAATAAAATCTAAAGATGGAGATGGGCCGAGCTTCAACTTATTGATGGAGCTCCTTCGTGGGGACCACTAA
- Protein Sequence
- MAAEMRSPNISVTPINVEVYHQPVPSSTTSSGEPPPDGADAEVARIEFHSSSVNMRSKNNDEEGGSHPPRPMSWEGELSDHERDMCVDEDSSHQIPENLSIIQQSKQTSTIIVDSKDSPILRLKQPPMGNYSLHSTPSHSPLLGQRHPITGVPIMSHKDMMYKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHINLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHNVHGSPLHHNVLYRSLQEDSSPSPYTNENDGLDEVEEKTGLLHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHSDFRSSSTELRHNMGDHSLTVKLEPPEFGSSHHRRSAIPGSKGVPPLLQEIMDVEHLWHYNETELHKLNTDGHLGKEGGSGAVHNLANHPLLAGTALAGSTETSPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMTTPGEIRVSLGKSITLSQARDMGMQACIERMLNFTEQLRRLRVDQYEYIAMKVILLLTSDTSELKEAEKVRISQEKALKALQDYTLVHYPDSPSKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_00764767;
- 80% Identity
- iTF_00998897;