Gvir018293.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- pnr
- Assembly
- GCA_956483585.1
- Location
- OY101442.1:29057639-29065601[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.57 2.4e+03 -0.6 0.0 15 25 204 214 202 214 0.87 2 3 7.7 3.2e+04 -4.2 1.7 1 5 456 460 456 461 0.78 3 3 2.1e-17 8.6e-14 52.0 7.4 1 34 508 540 508 542 0.97
Sequence Information
- Coding Sequence
- ATGGAACCACAATCgcagcaacatcaacaacaagAGCAATTGCAACAACAGCAAAGATTTCAGCAGCAACAAGCGCAACGATCCCCAGAAAAATATCACGCACATttattagataaaataaaaacggaaaataacAGTCAGGAGCACTTAAGCCAAACGGTAATAGAAAAGCAAGCAGAAGTAGAACAGCAACAACATCCACAACAATTAACCACTCAGCATCAGCAACTGCCACCAACAACACAACAACAGGCGCAGCAGCAACCAAATCCTACCACCACTATTATACAAACACAACAATCGCAACCTATTAATGCTGTGATACAAGCACAAAGCAGCCAAACGcatcaacaacagcagcagcaaccacctcaacaacaacaaccccAGCAACAACATTCCAGCCAGGAGGAATATGTACCCATACAGAGGCCACAACAGCGCCGATTTATAACCACATCTGGAGAATTAGTTCACAGAGATTCCGAAGAACCAGAAACAGCTAGTGAATACCAACGTCAACGTCATTCACCACCCGAATACGTACAAATGCCTCCCCGCAATGAGGAACAGCAGCCACCACCAGGAACCACAGTCTACACATACACCAATGAAAATGGACAACCCATTTTATGCACAGCGGATACTGCTGGTGGTACCATCAAACTAGAGTCAATAGATAAAGATCAGGTGCAAAATGAAAGTGGACATCAGCAGCAActtcaacagcagcagcagcaacatcaacaacaatgtCCCACTCCCAATGGTAACTATGCCGAATCAATGGTGGTTTCTTCATCGGCTTTACATCAACAGAATCCACACAACTTGTCCAGTTCGGCTCATACAACTCTGCCACATCCTGCCCATTTGCTGCGTTTCGAGGAAGACAATCGTTTCGGTCAAACACTCAATGATAACGGCAATGGACCGGCAACATTGTACTATGAAACAGCTGTTGTTGATCACAACGTTCATCCAAATGAATCCAAAACCTTTACAGATTTAGGCAATGCCCACTATTTGAATTATTCATCCACCTCTTCGTACCAGTTTAGtcaaaataatactttatataGTGTTTCGCCCGCTCCAAATCAATTGTTAACGAAAAGTGATCCAAGTTTGAATATCCTTCGTCAACCAGTGCAATATCAGCCAATGGCCTTATTCGATTCAGTCAATGCTCCAGTGGGCGAACAGAGTATATGGCCTACGGCTGGAGTGGAATATTCTAACATGGGCTTTAATTATCATCAGCAGGTGGTTGAGGATTATCCTCCGGCTAATCTAACTGCTAGCTCATGGGCTCCCACGAGTTCTATCTCACACTATGAGGCTCCACCTCCTTTGGCGGACAAATGTGAGCAATGTAACTCTCCTCTGGGTAGCAAAGCGAACGGCTACTGTCCCTCTTGTTATGGTAGCACCATACGTCAAACGGTGCGGGTGGGTCCTAGGCAGCCAAAAGCTAAAACAACAACATCTACAGCCAATAACAGACGGACTGGCGTAATCTGTGCCAACTGTCAAACAAACTCAACGACCTTGTGGCGCCGCAATAACGATGGTAATCCCGTTTGCAATGCTTGTGGGCTTTATTACAAGCTACACAATATGAATCGTCCGCTGTCGATGAAAAAGGAGGGCATACAAACACGTAAACGTAAGCCAAAGAATAGCGGTGCCCCACAAATGAGGCCTCAATTACCCAGCTTACCACCAGGTGGCGGCAGCTTAATGGTTCACTCCAACGGTCCATTGTATCCATCACAGGTTCAAACTATAGGTTTGTCTTTAAATGCTCAAACATCAAATACAGCTGACTTGCAAGACATGACGACAACAAATACCCGTGCGGTATCTATTGGCCATCCCGATATAACTTTGAATATGTCAAGGACTCATTTGACATCGGAGAGTCATTCACCGTATAGCAATCCGCCTTCGCAGAGTCACTCTCCACATCTGCCAACTGCAGCGAGTTTTAAaGTGCCACCAATTGAGGTTCCACGAACAACACAAAGCAGCGAAATGCCCACCAGTGTTATAACACGTACTGGTCTTCCAGAACGATcatcgaataattaa
- Protein Sequence
- MEPQSQQHQQQEQLQQQQRFQQQQAQRSPEKYHAHLLDKIKTENNSQEHLSQTVIEKQAEVEQQQHPQQLTTQHQQLPPTTQQQAQQQPNPTTTIIQTQQSQPINAVIQAQSSQTHQQQQQQPPQQQQPQQQHSSQEEYVPIQRPQQRRFITTSGELVHRDSEEPETASEYQRQRHSPPEYVQMPPRNEEQQPPPGTTVYTYTNENGQPILCTADTAGGTIKLESIDKDQVQNESGHQQQLQQQQQQHQQQCPTPNGNYAESMVVSSSALHQQNPHNLSSSAHTTLPHPAHLLRFEEDNRFGQTLNDNGNGPATLYYETAVVDHNVHPNESKTFTDLGNAHYLNYSSTSSYQFSQNNTLYSVSPAPNQLLTKSDPSLNILRQPVQYQPMALFDSVNAPVGEQSIWPTAGVEYSNMGFNYHQQVVEDYPPANLTASSWAPTSSISHYEAPPPLADKCEQCNSPLGSKANGYCPSCYGSTIRQTVRVGPRQPKAKTTTSTANNRRTGVICANCQTNSTTLWRRNNDGNPVCNACGLYYKLHNMNRPLSMKKEGIQTRKRKPKNSGAPQMRPQLPSLPPGGGSLMVHSNGPLYPSQVQTIGLSLNAQTSNTADLQDMTTTNTRAVSIGHPDITLNMSRTHLTSESHSPYSNPPSQSHSPHLPTAASFKVPPIEVPRTTQSSEMPTSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01075042; iTF_00921765; iTF_01162755; iTF_01259747; iTF_01138632; iTF_00350667; iTF_00260340; iTF_01261558; iTF_01194937; iTF_01177479; iTF_00742440; iTF_00655758; iTF_01377134; iTF_00259441; iTF_00200420; iTF_01236326; iTF_00045800; iTF_01237323; iTF_01238226; iTF_01202141; iTF_00436146; iTF_01398098; iTF_01400026; iTF_01174741; iTF_01399132;
- 90% Identity
- -
- 80% Identity
- -