Lcup012891.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- pnr
- Assembly
- GCA_001187945.1
- Location
- JRES01001605.1:809265-828544[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5 1.2e+04 -4.3 1.7 1 5 502 506 502 507 0.78 2 2 1.2e-17 2.8e-14 52.1 6.5 1 34 554 586 554 588 0.97
Sequence Information
- Coding Sequence
- atgcaaATATTAAGTTCCATGGTGTGTGAAAGTGGTGTTATTCATTCAAAAATGCATCTTAAGATGGAACCACAAgcgcagcaacagcaacaacaacaacaagatcaattgcagcaacaacagcaaagatatcagcaacaacaacaacaagtgcaACAATCACCAGAAAAATATCATACACATTTATTGGATAAAATCAAAACGGAAAGTAATGGTTCAGAACATTTAAATCATACAAATGCGAATACggttatagaaaaacaaactgtagttgaacaacaacaacaacaacagcagcagcatcaacaacaaccacaacaattGACTACCcagcatcatcaacaacaacagcaattacCACCCTCAACTCAACAACAggcacaacagcaacaaaatccCACCACTATTATACAATCGCAACAGAGTCAACCCATTAATGCTGtaatacaaacacaaaataatcaatcacaacaacaacaacaacaacagcaacaacaacaacaacctcaacaaccacaacatcaacaaccccaacatcaacaacatccCAGTCAAGAAGATTATGTACCTATACAAAGGACTCAACAACGCAGATTTATAACAACAACTGGAGAAttAGTCCATCGTGATTCCGACGACCCCGAAACGGTTAGCGAATACCAACGGCAGCGACATTCGCCCGCCGAATATGTACAAATGGCACCACGCAATGAAGAACAACAGCCACCGCCAGGTACCACAGTCTATACCTATACAACCAATGAAAATGGTCAACCCATTATATGTACAACCGATCCTGCGGGAGGAACGATTAAACTCGAGTCAATAGACAAAGATCAAGTGCAAAATGAAGCCGCCCAACAgttgcaacaacagcagcaacaccaacaacaatgtCCTACACCTAACGGCAACTATACGGAAACCATGGTGATACCTACGTCATCATTACATCATCAAAATCCTCATAATTTATCCAGTACAGCTCATACGACCATACCACATCCCACTCATTTGTTGCGATTCGAAGAAGATCGTTTTGGACAAACTCTCAACGATAATGGTAATGGTCCTACTACATTATACTATGAAGCGGCTGTGGTAGACACCAATGCACATCCTAATGAATCGAAAACGTTTACAGATTTGGGTAATGCTCATTATTTGAATTACTCCTCAACCTCCTCCTATCAGTTGAGTCAAAATAATACCATCTATAGTGTATCGCCGGCACCAAATCAATTGATAAGTAAAAATGATCCCAGTTTAAATATACTTCGGCAACAAGTGCCATATCAGTCAATGACTTTGTTTGATCCTGTTAATAGTTCAGTAGCCGAGCAGAGTATTTGGCCTACGGCCGGAGTGGAATATTCAAATATGGGCTTTAATTATCATCAGCAGGTGGTTGAAGAATATCCAACGGGCAATATAACCTCTAGCTCTTGGGCTCCCACTAGTTCCATAACACATTATGAAGCTCCACCTCCTTTGGCGGATAAATGTGAACAATGTAATTCTCCTTTAGGTAGTAAAGCAAACGGTTACTGCCCTTCTTGTTATGGAGGCCCTATACGTCAGACTGTACGTGTGGGTCCCCGACAAACAAAACCCAAAGCTTCAGCTGCCGCCGCCAATAATAGACGGACCGGTGTTACTTGTGCTAATTGTCAAACTAATTCAACTACTTTATGGCGTCGTAATAATGATGGAAATCCTGTTTGTAATGCCTGCGGTCTGTACTTCAAACTACACAACATGAATCGTCCGCTTTCCATGAAAAAGGACGGCATACAAAAACGTAAACGTAAACCAAAGAATAGCGGCCCACAACAGATGAGACCACCATTACCTAGCTTACCACCAGGTGGCGGTAGTCTAATGGTGCACTCGAATGGTCCTCTGTATCCTTCACAAGTGCAAACAATAGGCCTTCCCCTAAATGCTCAAGCACCAAATCCAGGTGATTTGCAAGACATGACTACCACAGGTCCTCGTACGGTATCCATTGGTCATCAAGATATGACTTTGAATATGTCACGACCCCATGTTACTTCAGATAGTCATTCACCGTATAGCAATCCTCCTTCGCAGAGTCAGTCACCGCATCTGCCAAGTACAGCGAGTTTTAAAGTGCCTCCAATTGAAGTGCCCCGAACAACGCAAAGCAGTGAAATACCTACGAGCGTTATAACACGCACTGGATTACCAGAACGTACATCGAATAACTGA
- Protein Sequence
- MQILSSMVCESGVIHSKMHLKMEPQAQQQQQQQQDQLQQQQQRYQQQQQQVQQSPEKYHTHLLDKIKTESNGSEHLNHTNANTVIEKQTVVEQQQQQQQQHQQQPQQLTTQHHQQQQQLPPSTQQQAQQQQNPTTIIQSQQSQPINAVIQTQNNQSQQQQQQQQQQQQPQQPQHQQPQHQQHPSQEDYVPIQRTQQRRFITTTGELVHRDSDDPETVSEYQRQRHSPAEYVQMAPRNEEQQPPPGTTVYTYTTNENGQPIICTTDPAGGTIKLESIDKDQVQNEAAQQLQQQQQHQQQCPTPNGNYTETMVIPTSSLHHQNPHNLSSTAHTTIPHPTHLLRFEEDRFGQTLNDNGNGPTTLYYEAAVVDTNAHPNESKTFTDLGNAHYLNYSSTSSYQLSQNNTIYSVSPAPNQLISKNDPSLNILRQQVPYQSMTLFDPVNSSVAEQSIWPTAGVEYSNMGFNYHQQVVEEYPTGNITSSSWAPTSSITHYEAPPPLADKCEQCNSPLGSKANGYCPSCYGGPIRQTVRVGPRQTKPKASAAAANNRRTGVTCANCQTNSTTLWRRNNDGNPVCNACGLYFKLHNMNRPLSMKKDGIQKRKRKPKNSGPQQMRPPLPSLPPGGGSLMVHSNGPLYPSQVQTIGLPLNAQAPNPGDLQDMTTTGPRTVSIGHQDMTLNMSRPHVTSDSHSPYSNPPSQSQSPHLPSTASFKVPPIEVPRTTQSSEIPTSVITRTGLPERTSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00760661;
- 90% Identity
- iTF_00922581;
- 80% Identity
- -