Tfer009265.1
Basic Information
- Insect
- Tachina fera
- Gene Symbol
- pnr
- Assembly
- GCA_905220375.1
- Location
- LR999963.1:152847677-152857616[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.46 2.7e+03 -0.6 0.0 15 25 210 220 208 220 0.87 2 3 6.2 3.7e+04 -4.2 1.7 1 5 462 466 462 467 0.78 3 3 1.7e-17 9.9e-14 52.0 7.4 1 34 514 546 514 548 0.97
Sequence Information
- Coding Sequence
- ATGGAAGCGCAAtcgcaacaacagcaacagcaagagCAATTGCAACAACAGCAAAGATTTCAGCACCAACAAGTGCAGCGATCGCCAGAAAAGTTTCATACGCATTTAttggataaaataaaaacggaaAGTAACAGTCAGGAGCAGTTAAATCAAGCGGTAATAGAGAAACAAACGGAAGTGGAGCAACCGCAACAATTAACCACTCAtcatcaacaacagcagcagcaattgCCACCAGTTACGCAACAACAAGATCATACAACCATTATACATGCACCGCAACAAACGCAACCTCTTAATGCTGTGATACAAACGCAAAGCAATCaagcacaacaacaacaacaacaacaacaacaacagcaaaactCTCAACAACAGTcccagcaacagcaacaacagcagcagcaacaacatccTAGTCAGGAAGAATATATACCCATACAAAGGACACAACAGCGGAGATTTATAACAACATCTGGAGAATTAGTTCATCGTGATACGGAAGATACCGACTCAGCCAGCGAGTATCAACGTCAACGTCATTCGCCACCCGAGTACGTGCAAATGGCTCCTCGCAATGAAGAGCAACAGCCACCACCAGGTACCACCGTCTACACTTACACCAATGAAAATGGTCAGCCCATTTTATGTACAGCTGATACTGCCGCTGGTACCATCAAACTAGAGTCCATAGAGAAAGATCAGGTGCAAAATGAAGCTGCCCAACAACttcagcagcaacagcaacagcaacaacaccaGCAACAATGTCCCACCCCTAATGGCAATTACACGGAATCCATGTTGGTACCTGCCTCCGCTTTACATCAACAGAATCCACACAATTTGTCTACTTCAGCTCATAACGTCCTGCCGCATCCCACTCATTTGTTACGTTTCGAGGACGACAGCCGTTTTGGTCAACCACTTAGCGATAGCGGTAATGGACCCGCCACATTGTACTACGAAGCAGCTGTAATTGATCCCAACGCTCATCCAAATGAATCGAAAACTTTCACAGATCTGGGTAGTTCCCATTATTCCCATTACTCGTCCTCGTCTTCGTATCAGTTTAGTCAAAATAATACCATATACAGCGTTTCGCCGGCTTCAAATCAATTGATCAGCAAAAATGATCCCAGTTTAAATATACTACGTCAACCAGTGCAGTATCAGCCAATGGCCTTATTCGATTCGGTCAATGCTCCTGTTACCGAACAAAATATCTGGCCTACAGTTGGGGTGGAATATTCCAATATGGGTTTTAGTTATCATCAGCAGGTGGTTGAGGAATATCCTCCGACTAATATAGCTGCCAGCTCTTGGGGTCCTACCAGCTCTATTACACATTACGAAGCTCCGCAACCCCTGTCCGACAAATGTGAACAATGCAACTCACCCCTAGGCATGAAAGCGAATGGCTACTGTCCCTCTTGTTATGGCAGCACCATACGTCAAACGGTGCGCGTAGGTCCTAGACAAGCAAAACCCAAACAATCAGCAGCTGCAGTCAATAACAGACGGACCGGTGTAATATGTGCCAACTGTCAAACAAACTCAACGACCTTGTGGCGTCGCAATAATGACGGTAATCCTGTCTGTAATGCTTGTGGACTTTATTACAAACTGCACAACATGAATCGCCCGCTTTCGATGAAAAAGGAAGGTATACAAAAGCGTAAGCGCAAGCCAAAGAATAGCGGCGGACCACCTTTGAGACCTCAATTACCCAGTCTACCACCAGGAGGTGGTAGCTTGATGGCCCATTCCAGTGGGCCACTGTATCCGTCACAAGTTCAAACCATAGGTTTGCCCTTAAATGCTCAAACGTCAAATTCAGCTGACTTGCAAGACATGACGACAACACGTGCAGTATCTATTGGTCAGTCAGACATGACTTTGAATATGTCTAGGGCCCATGTGGCAACCGATAATCATTCCTCGTACAGTACACCACCTTCACAGAGTCAATCACCACATCTGCCAACAGCAGCAAACTTTAAagtGCCACCAATCGAACTTCCTCGAACAACACAGAGCAGTGAAATACCCACCAGTGTTATAACACGTACTGGTGTACCAGAACGGTCAtcgaataattga
- Protein Sequence
- MEAQSQQQQQQEQLQQQQRFQHQQVQRSPEKFHTHLLDKIKTESNSQEQLNQAVIEKQTEVEQPQQLTTHHQQQQQQLPPVTQQQDHTTIIHAPQQTQPLNAVIQTQSNQAQQQQQQQQQQQNSQQQSQQQQQQQQQQHPSQEEYIPIQRTQQRRFITTSGELVHRDTEDTDSASEYQRQRHSPPEYVQMAPRNEEQQPPPGTTVYTYTNENGQPILCTADTAAGTIKLESIEKDQVQNEAAQQLQQQQQQQQHQQQCPTPNGNYTESMLVPASALHQQNPHNLSTSAHNVLPHPTHLLRFEDDSRFGQPLSDSGNGPATLYYEAAVIDPNAHPNESKTFTDLGSSHYSHYSSSSSYQFSQNNTIYSVSPASNQLISKNDPSLNILRQPVQYQPMALFDSVNAPVTEQNIWPTVGVEYSNMGFSYHQQVVEEYPPTNIAASSWGPTSSITHYEAPQPLSDKCEQCNSPLGMKANGYCPSCYGSTIRQTVRVGPRQAKPKQSAAAVNNRRTGVICANCQTNSTTLWRRNNDGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNSGGPPLRPQLPSLPPGGGSLMAHSSGPLYPSQVQTIGLPLNAQTSNSADLQDMTTTRAVSIGQSDMTLNMSRAHVATDNHSSYSTPPSQSQSPHLPTAANFKVPPIELPRTTQSSEIPTSVITRTGVPERSSNN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00760661;
- 90% Identity
- iTF_01075042; iTF_01400026; iTF_01399132;
- 80% Identity
- -