Plab001417.1
Basic Information
- Insect
- Pollenia labialis
- Gene Symbol
- pnr
- Assembly
- GCA_949318255.1
- Location
- OX439139.1:23742058-23747928[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4 4e+04 -4.2 1.7 1 5 450 454 450 455 0.78 2 2 1.4e-17 1.1e-13 52.0 7.4 1 34 502 534 502 536 0.97
Sequence Information
- Coding Sequence
- ATGGATCCACAAacgcaacaacagcaacaacaagagCAATtgcaccaacaacaacaacgatatCAACAAGTACAACAATCCCCTGAACGATATCATACACATTTATTGGATAAAATTAAAACGGAAAATAATGTTCCAGAGCATTTAAATCATACAAATGCTAATACGGTTATAGAAAAACAAACGCAGGTTGAACCCCAGCAGCAACCCCAACAATTAACCACTCAACATCATtcacaacagcagcagcagcaattACCGCCTGTTTCTCAACAGCAAACCCAACAAAATCCTTCAACCATTATACAAACACAACAATCCCAGCCCATTAACGCTGTAATACACACACAAAACAGTCAACcccaacaacagcagcagcaacaaccaGCCCAGCATCCTAGTCAGGAAGAATATGTGCCCATACCAAGAACACAACAACGGAGATTTATAACAACAACGGGAGAGTTAGTCCATCGTGATACCGAAGATCCTGAAACTGTTAGCGAATTCCAACGTCAACGTCATTCACCCACAGAGTATGTACAAATGGCTCCACGCAATGAGGAACACCAACCTCCACCAGGTAGCACCGTCTATACTTACACTACCAATGAAAATGGCCAGCCAATTATATGCACTACCGATCCATCAGGAGGCACTATTAAACTCGAGTCAATGGATAAAGACCAGGTACAAAATGAAGCTTCTCATCAACAGCAACTCCAACAGCAGCAACACCACCAACAATGTCCTACGCCAAATGGCAACTATGCCGAATCAATGGTGGTCTCTGCATCTGCTCTACATCATCAAAATCCCCATAATTTATCCAGTACAGGTCATGACACTATACCACATCCCACCCATTTGTTACGTTTTGAGGAAGACAATCGTTTTAGTCATACGCTCAATGATAATGGACCTGCCACATTATACTATGAAACATCTGTAATTGATCCCCATGCCCACCCTAATGAATCAAAAACTTTCACAGATTTGGGCAGTGCTCACTATTTGAACTATTCGTCCACATCATCGTATCAGCTGAGTCAAAATAATACCATCTATAGTGTTTCGCCGGCACCAAATCAATTGATTACCAAGAATGATCCCAACTTAAATATACTTCGGCAGCCAGTGCAATATCAGTCGATGGCCCTTTTTGATTCGGCACCAGTAGGTGAACAAAGTATATGGCCAACGTCTGGCGTCGAATATTCCAATATGGGCTTTAATTATCATCAGCAGGTGGTTGAGGAATATCCGGCGGGAAATATTTCCGCAAACTCTTGGGGCCCCACAAGTTCCATAACACATTACGAAGCTGCACCTCCTTTAGCGGTCAAATGTGAACAATGCAATTCTCCTTTGGGTATTAAAGCGAATGGTTATTGTCCTTCTTGTTATGGTAGTCCAATACGTCAAAATGTTAGGGTTGGACCTAGACAAGCCAAGCCGAAGGCTTCCGCAGCTGCCGCCAATAACAGACGGACTGGTGTAATTTGTGCCAACTGTCAAACGAATTCTACGACATTGTGGCGCCGCAACAATGATGGAAATCCGGTTTGTAATGCTTGTGGCCTGTATTACAAACTTCATAATATGAATCGTCCTCTATCGATGAAAAAGGAAGgcatacaaaaacgtaaacgtaaACCAAAGAATAGTGGTGTACCACCCATGAGACCTCAATTACCTAGCTTACCACCGGGAGGCGGTAATTTAATGGTGCATTCCAACGGTCCACTGTATCCCTCACAAGTTCAAACAATAGGCCTGCCTTTAAATGCTCCACCTCCAAATTCATCTGACTTGCAAGACATGACGACAACAACTACACGTTCAGTATCTATTGGTCATCCCGATATGACTTTAAATATGTCAAGGCCTCATGTGACATCAGATAGCCATTCACCTTATAGTAATCCACCTTCACAGAGTCAATCACCTCATTTACCTAGTTCAGCGAATTTTAAAGTGCCACCAATTGAAGTGCCCCGAACAACACAGAGCAGTGAAATACCCACCAGTGTTATAACGCGTACTGGACTACCAGAACGTACATCGAAtaattaa
- Protein Sequence
- MDPQTQQQQQQEQLHQQQQRYQQVQQSPERYHTHLLDKIKTENNVPEHLNHTNANTVIEKQTQVEPQQQPQQLTTQHHSQQQQQQLPPVSQQQTQQNPSTIIQTQQSQPINAVIHTQNSQPQQQQQQQPAQHPSQEEYVPIPRTQQRRFITTTGELVHRDTEDPETVSEFQRQRHSPTEYVQMAPRNEEHQPPPGSTVYTYTTNENGQPIICTTDPSGGTIKLESMDKDQVQNEASHQQQLQQQQHHQQCPTPNGNYAESMVVSASALHHQNPHNLSSTGHDTIPHPTHLLRFEEDNRFSHTLNDNGPATLYYETSVIDPHAHPNESKTFTDLGSAHYLNYSSTSSYQLSQNNTIYSVSPAPNQLITKNDPNLNILRQPVQYQSMALFDSAPVGEQSIWPTSGVEYSNMGFNYHQQVVEEYPAGNISANSWGPTSSITHYEAAPPLAVKCEQCNSPLGIKANGYCPSCYGSPIRQNVRVGPRQAKPKASAAAANNRRTGVICANCQTNSTTLWRRNNDGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNSGVPPMRPQLPSLPPGGGNLMVHSNGPLYPSQVQTIGLPLNAPPPNSSDLQDMTTTTTRSVSIGHPDMTLNMSRPHVTSDSHSPYSNPPSQSQSPHLPSSANFKVPPIEVPRTTQSSEIPTSVITRTGLPERTSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00760661;
- 90% Identity
- iTF_01237323;
- 80% Identity
- -