Gspa004249.1
Basic Information
- Insect
- Globia sparganii
- Gene Symbol
- pnr_1
- Assembly
- GCA_949316385.1
- Location
- OX438655.1:289666-303563[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-18 3e-14 53.4 3.8 1 35 111 144 111 145 0.97 2 2 2.8e-18 1.8e-14 54.1 6.0 1 34 165 197 165 199 0.98
Sequence Information
- Coding Sequence
- ATGttcggcggcggtggcggcgtaGGCGCGGGCTAcaacggcggcggcggcgactgCGCCGACGGCTACGGGCTGGGCTACGTGGCGGGCGGCGGCCGCTTGCAGCAGTACGCCGCGCACTTCGCGCCCCACCAGAACGTGTGGCACCACCACCACCCCACGCACCACGAAACCTATGCAGGCGGCGGCGGGGTGAGCGGCGTGGGCGGGGTGGCGGGGGGGCTGTACTCGCAGAACATGGTGATGGGGTCGTGGTGCGCGCCCTACGACGCGCTGCAGAGGCCCACTGCTTACGATGGCGTGCTGGAGATGTACGAGGAGGGGCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACGCCACGGGCCACTACCTGTGCAACGCGTGCGGGCTCTACCACAAGATCAACGGCGTCAACCGCCCGCTCGTGAAGCCGAGCAAGCGGCTGTCGGCTGCGCGGCGCCACGGGCAGTGCTGCACCAACTGCGGTTCGCGCAACACCACGCTGTGGCGGCGCAACAACGACGGCGAGCCCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGGATCAACCGGCCTCTAGCAATGAGGAAGGACGGTATCCAGACGCGGAAACGTAAGCCAAAGAAATCTGGCAACGGAACGAAGCCGCCACAAGACGGCAACAAGAAAGATGAGCACAGCTCTCCAGGGATGGACGACAGCAAACAGAGTCTCCCAGAGGTGCCACTGCCGTTGACGCAGTCAATGTCTAGTCACGGCGCGTCTAAAAGTCGTGAGGCGCACGTGACGCCGGACACGTCGCCGCACGGGCACGGGCACGCGCACGCGCACGCGGCGCAGCACGCGCACGCGCAGGGCGGGCAGCACGCGCAGTACCCGCTGGGGCTGCCCGGCGCGCCCTTCCTGACCAACCCGTCGCTGTTCAACATCAAGAGCGAGCCCAGCAACGCGACCGCATACGACTCATACCCGCCGCACTCCACTCCGCACTACCACTCGCAGCAACACTATCTGCACGCGTTACAGTACGGATTGGGCAACGGCGAGGAGGAGGAGGGCAGCGGCTTCCTGCACCAGCGCAACGTCACGGCGCACGCCAAGCTCATGGCGTCCACGTAG
- Protein Sequence
- MFGGGGGVGAGYNGGGGDCADGYGLGYVAGGGRLQQYAAHFAPHQNVWHHHHPTHHETYAGGGGVSGVGGVAGGLYSQNMVMGSWCAPYDALQRPTAYDGVLEMYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGTKPPQDGNKKDEHSSPGMDDSKQSLPEVPLPLTQSMSSHGASKSREAHVTPDTSPHGHGHAHAHAAQHAHAQGGQHAQYPLGLPGAPFLTNPSLFNIKSEPSNATAYDSYPPHSTPHYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041441; iTF_01064289; iTF_00953186; iTF_00726980; iTF_01027905; iTF_01193284; iTF_00040453; iTF_00445765; iTF_00933253; iTF_00124838; iTF_01539275; iTF_00122010; iTF_01492550; iTF_01342665; iTF_00685994; iTF_01085962; iTF_00712516; iTF_00043143; iTF_01534452; iTF_01084794; iTF_01065214; iTF_01535494; iTF_01076039; iTF_00384238; iTF_01173842; iTF_01198324; iTF_00044122; iTF_00707515; iTF_00301756; iTF_01502623; iTF_00450667; iTF_01152715; iTF_01361246; iTF_00177740; iTF_01063406; iTF_01265454; iTF_00678179; iTF_01077139; iTF_01532686; iTF_00375919; iTF_00447823; iTF_00809715; iTF_00077155; iTF_00365434; iTF_01231219; iTF_00042292; iTF_00300820; iTF_00952369; iTF_00772543; iTF_00302708; iTF_00929233; iTF_01526677; iTF_00785686; iTF_00018679; iTF_00274903; iTF_00364567; iTF_00037434; iTF_00906715; iTF_01030779; iTF_01031621; iTF_01028874; iTF_01029802; iTF_00888855; iTF_00123005; iTF_01533600;
- 90% Identity
- iTF_01526677;
- 80% Identity
- -