Ctra006273.1
Basic Information
- Insect
- Cosmia trapezina
- Gene Symbol
- pnr
- Assembly
- GCA_905163495.1
- Location
- LR991022.1:357022-377153[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-18 4.3e-14 53.3 3.8 1 35 115 148 115 149 0.97 2 2 3.9e-18 2.6e-14 54.0 6.0 1 34 169 201 169 203 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGCGGCAGCGCGGGCGCAGGCTACGGCGGCGGCGCCGACTGCGGCGACGGCTACGGGCTGGGCTACGTGGCGGGCGGCGCACGGCTGCAGCAGTACGCCGCGCACTTCGCGCCGCACCAGAACGTGTGGCACCACCACCACCCGACGCACCACGACACCtacgCAGGTGGCGGCGGGGTGAGCGGCGTGGGCGGCGTGGGCGGCGTGGGCGGGGTGGCGGGGGGGCTGTACTCGCAGAACATGGTGATGGGCTCGTGGTGCGCGCCCTACGACGCGCTGCAGAGGCCCACCGCTTACGATGGCGTGCTGGAGATGTACGAGGAGGGGCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACGCCACCGGCCACTACCTGTGCAACGCCTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGCCCGCTCGTGAAGCCGAGCAAGCGGCTGTCGGCTGCGCGGCGCCACGGGCAGTGCTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGGCGCAACAACGACGGAGAGCCCGTCTGCAACGCGTGCGGCCTCTACTACAAACTGCACGGTATCAACCGGCCTCTAGCAATGAGGAAGGATGGCATCCAGACGAGGAAACGCAAGCCAAAGAAATCTGGCAACGGAGCGAAGCCGCCACAAGACGCTAACAAGAAAGATGAGCACAGCTCTCCAGGGATGGACGACAGCAAACAGAGTCTCCCGGAGGTGCCCCTGCCGCTGACGCAGTCAATGTCTAGTCACAGCGCGTCCAAGAGCCGCGAGGCGCATGCGACACCGGACACGTCGCCGCACGGGCACGGGCACGCGCACGCGCACGCGCTGGGGCACGCGCCGGCGCAGCAGCACGCGCACGCGCAGGCCGGCCACCACGCGCACGCGCAGTACCCGCTGGGCCTGCCCGGCGCGCCCTTCATGTCCAACCCGTCGCTGTTCAACATCAAGAGCGAGCCCAGCAACGCCGCCGGCTACGACTCGTACCCGCCGCACTCCACGCCGCACTACCACTCGCAGCAACACTATCTGCACGCGTTACAGTACGGACTGGGCAACGGCGACGAGGAGGAGGGTAGCGGCTTCCTGCACCAGCGCAACGTCACGGCGCACGCCAAGCTCATGGCGTCCACGTAG
- Protein Sequence
- MFGGGSAGAGYGGGADCGDGYGLGYVAGGARLQQYAAHFAPHQNVWHHHHPTHHDTYAGGGGVSGVGGVGGVGGVAGGLYSQNMVMGSWCAPYDALQRPTAYDGVLEMYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGAKPPQDANKKDEHSSPGMDDSKQSLPEVPLPLTQSMSSHSASKSREAHATPDTSPHGHGHAHAHALGHAPAQQHAHAQAGHHAHAQYPLGLPGAPFMSNPSLFNIKSEPSNAAGYDSYPPHSTPHYHSQQHYLHALQYGLGNGDEEEGSGFLHQRNVTAHAKLMAST*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00746375;
- 90% Identity
- iTF_01526677;
- 80% Identity
- -