Xict008100.1
Basic Information
- Insect
- Xanthia icteritia
- Gene Symbol
- pnr
- Assembly
- GCA_949128155.2
- Location
- OX421934.2:23970164-23990703[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-18 3.4e-14 53.3 3.8 1 35 111 144 111 145 0.97 2 2 3.4e-18 2e-14 54.0 6.0 1 34 165 197 165 199 0.98
Sequence Information
- Coding Sequence
- ATgttcggcggcggcggcggcgtgggcGCGGGCTAcaacggcggcggcggcgactGCGCCGACGGCTACGGGCTAGGCTACGTGGCGGGCGGCGGGCGCCTGCAGCAGTACGCCGCGCACTTCGCGCCCCACCAGAACGTGTGGCACCACCACCACCCCACGCACCACGAGACCTACGCAGGCGGCGGCGGGGTGAGCGGCGTGGGCGGCGTGGCGGGGGGGCTGTACTCGCAGAACATGGTGATGGGCTCGTGGTGCGCGCCCTACGATGCGCTGCAGCGACCCACCGCTTACGATGGCGTGCTGGAGATGTACGAGGAGGGGCGCGAGTGCGTCAACTGCGGCGCCAATAACACGCCGTTGTGGCGCCGCGACGCCACGGGCCACTACCTGTGCAACGCCTGCGGCCTCTACCACAAGATCAACGGTGTTAACCGCCCGCTCGTGAAGCCGAGCAAGCGGCTGtcggcggcgcggcgccaCGGGCAGTGTTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGGCGCAACAACGACGGCGAGCCCGTCTGTAACGCGTGCGGCCTCTACTACAAACTGCACGGGATCAACCGGCCTTTAGCAATGAGGAAGGACGGCATCCAGACGAGGAAACGTAAGCCAAAGAAATCTGGGAACGGAGCGAAGCCGCCACAAGACGCCAACAAGAAAGATGAGCACAGCTCTCCAGGGATGGACGACAGCAAACAGAGTCTCCCAGAGGTTCCACTGCCGCTGACGCAGTCAATGTCTAGTCACGGCGCGTCGAAGAGCCGCGAAGCGCACGTGACGCCGGACACTTCGCCGCACGGGCACGGGCACGCGCACGCGCATGCGCTGGGGCACGCCCCGGCGCAGCAGCACGCGCACGCGCAGGCCGGCCACCACACGCACGCGCAGTACCCGCTGGGCCTGCCCGGCGCACCCTTCCTGTCCAACCCATCGCTGTTCAACATCAAGAGCGAGCCCAGCAACGCCGCCGGCTACGACTCGTACCCGCCGCATTCCACGCCGCACTACCACTCGCAGCAGCACTACCTACACGCGTTGCAGTACGGACTGGGCAACGGCGAGGAAGAGGAGGGCAGCGGCTTCCTGCACCAGCGCAACGTCACGGCACACGCAAAGCTCATGGCGTCCACGTAG
- Protein Sequence
- MFGGGGGVGAGYNGGGGDCADGYGLGYVAGGGRLQQYAAHFAPHQNVWHHHHPTHHETYAGGGGVSGVGGVAGGLYSQNMVMGSWCAPYDALQRPTAYDGVLEMYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGAKPPQDANKKDEHSSPGMDDSKQSLPEVPLPLTQSMSSHGASKSREAHVTPDTSPHGHGHAHAHALGHAPAQQHAHAQAGHHTHAQYPLGLPGAPFLSNPSLFNIKSEPSNAAGYDSYPPHSTPHYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00746375;
- 90% Identity
- iTF_00041441; iTF_00726980; iTF_01193284; iTF_00123005; iTF_01286085; iTF_00124838; iTF_01535494; iTF_00327527; iTF_00746375; iTF_01342665; iTF_00185802; iTF_00450667; iTF_01488204; iTF_01532686; iTF_00375919; iTF_00447823; iTF_00445765; iTF_00000849; iTF_00952369; iTF_00851349; iTF_00300820; iTF_01118897; iTF_01117917; iTF_01260658; iTF_00042292; iTF_00274903; iTF_00364567; iTF_00037434; iTF_01425634; iTF_00044122; iTF_00906715; iTF_00772543; iTF_00001664; iTF_00384238;
- 80% Identity
- -