Basic Information

Gene Symbol
pnr
Assembly
GCA_963859945.1
Location
OY982560.1:28672041-28684092[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7e-18 2.5e-14 53.5 3.8 1 35 74 107 74 108 0.97
2 2 4.2e-18 1.5e-14 54.2 6.0 1 34 128 160 128 162 0.98

Sequence Information

Coding Sequence
ATGGAAGCGTTACCTTACAATCTTGATCTACCAGCTCACTGGTTGCAAAGCATGGCGATGTTCGCAGCTGGCGGCGGCGGTGTGAGCGGCGTGGGTTCGGTAGCCGGCGGGTTGTATTCCCAGAACATGGTCATGGGTTCCTGGTGTCCGCCTTACGACGCGTTGCAGAGACCTACTGCTTACGATGGCGTTCTGGAGATGTGCGAGGAAGGGCGCGAGTGCGTGAACTGCGGCGCGAACAACACGCCGCTGTGGCGGCGCGACGCCACCGGCCACTATTTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGACCGCTCGTCAAACCGAGCAAGCGGCTGTCAGCCCAGCGACGTCACGGCCAGTGCTGCACCAATTGCGGCTCTCGGAACACAACGCTGTGGCGACGCAACAACGATGGGGAGCCAGTTTGCAACGCGTGCGGATTGTACTACAAACTGCACGGCATCAATAGGCCATTAGCGATGCGTAAAGATGGTATCCAGACCCGGAAACGCAAACCAAAGAAGTCTGGCAACGGAACGAAACCTCCCCAGGATAATAACAAAAAGGATGACCATAGTTCTCCCGGACTTGAAGACAGCAAACAGAGTGTAGGAGAAATGCCTCTCCCTCTGCCCCTCACGCAGTCGATGTCTAGTCACAGCCAGAGCACGAGCAAGCCGCAGTCACCACAGGCGCACATCCACACGCACGCTCAgcacgcgcacgcgcacgcgcacgcTCAAGCGCACGCGCATGCGCAGGGCGCCGGCGCGCACGCGCAGTACGCGCTCGGTCTGCCCACTGCGCCCGCCTTCCTCTCCAACCCCTCGCTGTTCAACATCAAAAGCGAGCCCAGTACCGCCAATGGTTACGACTCTTACTCCGCTCACTCCGGCGGACACTACCACTCGCAACAACACTACCTGCACGCCTTACAGTACGGCCTCGGTAACGGCGAGGAGGAGGAAGGCAGCGGGTTCCTCCACCAGCGCAACGTCACAGCACACGCCAAGCTCATGGCGTCCACGTAG
Protein Sequence
MEALPYNLDLPAHWLQSMAMFAAGGGGVSGVGSVAGGLYSQNMVMGSWCPPYDALQRPTAYDGVLEMCEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAQRRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGTKPPQDNNKKDDHSSPGLEDSKQSVGEMPLPLPLTQSMSSHSQSTSKPQSPQAHIHTHAQHAHAHAHAQAHAHAQGAGAHAQYALGLPTAPAFLSNPSLFNIKSEPSTANGYDSYSAHSGGHYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2