Hamb008404.2
Basic Information
- Insect
- Hoplodrina ambigua
- Gene Symbol
- pnr
- Assembly
- GCA_949774945.1
- Location
- OX458968.1:16154439-16165596[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-18 2.3e-14 53.3 3.8 1 35 111 144 111 145 0.97 2 2 4e-18 1.4e-14 54.0 6.0 1 34 179 211 179 213 0.98
Sequence Information
- Coding Sequence
- ATGttcggcggcggcggcggcgtggGCGCGGGCTACaacggcggcggcggcgactgCGCCGACGGCTACGGGCTCGGCTACGTGGCCGGCGGCGGGCGCCTGCAGCAGTACGCCGCGCACTTCGCGCCGCACCAGAACGTGTGGCACCACCACCACCCCACGCACCACGACACCTACGCAGGCGGCGGCGGGGTGAGCGGCGTGGGAGGGGTGGCGGGGGGGCTGTACTCGCAAAATATGGTCATGGGCTCCTGGTGCGCCCCCTACGATGCGCTGCAGAGGCCCACCGCTTACGATGGCGTGCTGGAGATGTACGAGGAGGGGCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACGCCACGGGACACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGCCCGCTCGTGAAGCCGAGCAAGCGGCTGAGATGGATGAGTGTGGAGGGCATGGCCAGGGGCATGAAGAAGTCCGCGGCGCGGCGCCACGGGCAGTGCTGCACCAACTGCGGCTCACGCAACACCACGCTGTGGCGGCGCAACAACGACGGCGAGCCCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCATCAACCGGCCTCTAGCAATGAGGAAGGACGGCATCCAGACGCGGAAGCGTAAGCCAAAGAAATCTGGCAATGGAGCCAAACCACCAAACGACGCCAATAAGAAAGACGAGCACAGCTCTCCTGGAATGGATGACAGCAAACAGAGTCTTCCAGAGGTGCCACTGCCGCTGACGCAGTCAATGTCTAGTCACGGCGCTTCCAAGAGCCGCGAGCACGTCACGCCGGACACGTCGCCGCACGGACACGGACACGGGCACGCGCTCGGTCACGCGCAGGCGCAAAATCACGCGCACGCGCCGACGGGCCACCACGCACACGCGCAGTACCCGCTGGGCCTGCCCGCCGCGCCCTTCCTCTCCAACCCCTCACTGTTCAACATCAAGAGCGAGCCCAGCAACGCCGCCGGCTACGACTCGTACCCGGCGCACTCCGGACCGCACTACCACTCGCAGCAGCACTACCTGCACGCGCTGCAGTACGGTCTGGGCAACGGCGAGGAGGAGGAAGGCAGCGGCTTCCTGCACCAACGCAACGTCACGGCGCACGCCAAGCTTATGGCGTCCACGTAG
- Protein Sequence
- MFGGGGGVGAGYNGGGGDCADGYGLGYVAGGGRLQQYAAHFAPHQNVWHHHHPTHHDTYAGGGGVSGVGGVAGGLYSQNMVMGSWCAPYDALQRPTAYDGVLEMYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLRWMSVEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGAKPPNDANKKDEHSSPGMDDSKQSLPEVPLPLTQSMSSHGASKSREHVTPDTSPHGHGHGHALGHAQAQNHAHAPTGHHAHAQYPLGLPAAPFLSNPSLFNIKSEPSNAAGYDSYPAHSGPHYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00746375;
- 90% Identity
- iTF_00177740;
- 80% Identity
- -