Eruf002821.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- -
- Assembly
- GCA_963920795.1
- Location
- OY987204.1:22556168-22557548[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.3e-14 3.7e-11 43.7 0.0 2 43 260 301 259 302 0.93 2 3 0.011 6.4 7.7 0.0 8 39 313 343 309 349 0.75 3 3 4.1e-16 2.4e-13 50.7 0.0 5 39 369 402 367 406 0.94
Sequence Information
- Coding Sequence
- ATGAACCATTTGAAGTGGATGGGCCACGCCGATACGGTCCTGGAAATCCAGCGGGGCCTCTTCGCCGACTCGAGCACCTGTGACGTGACCGTGTCGTGTGGCCATGGCGAAAAGTCCCACCAGGCGCACAGATTTATCCTGTCCTCGTGCAGCGACTACTTCCGCGACATGCTGGCGGACATTCCCAACGGCCAGGAGACGACAATTATTATCCCGGACCTCAAGGAGGCGATCCTCGACAGCGTCCTCAAGTTCATCTACTTGGGCGAGGTGTCGGTGCGATCGTCCAACCTCTCCGAATTCCTCGAAACGATGAATCTGCTCGGGATCAAGAGCGCCATCAGCTTCGACTGCCACCTGAACAAGCGGAAACCAACGAGCGTTTTCACCCCCGTCGAGGTCGAGACCATTGAGGTCGACAAGACCCCCACTGAGGACGAGGAAACTGCCCCGGTGGAGGGCTGCGCCCCGAAAGACTTCGAGTACTTGGAGGTATACAACGAGGAGGCAAAAATCGGACAATTCACCATCGAGCACATCGAGCAGGATTCCAACGGCGACTACATTTTGGGGGATAACTCTGAAAACTCCTTCCATCTCGCTGCTGAGGAGAAAAGCGGCGATATTAAACAAGATTCGCTGCAGTTTAACGAGGACACCGCTGGCGACGACATTGTCATGAAAGAGGAGGACGAGGAGGATgaggaagaagaaaaatctcTCGACGAAAAAGATAAAGTGGACACCTCCTCCTTCAGTGACTTGATGCAGTCGCGAAACGCCGCTTTTGACGGAGCCGTCCGGGCGGTAATTGAGTGCGGCATGAGTCTCCAGAAAGCGGCCACTAAATTCAACATATCCAAAACAGTTCTCTGGCGGCGAGTCAAGAAGCACCCGCAGTACAGAATATACAGGGAAAATCCAATTATAGTCTCCGCGATTGAAAAACTCCAAAGGGGTGAATCCCTGAAGAGCATCAGCTCCGCGCTGGACATACCGATGTCCACCCTGCACAGGCATAAAATGCGCCTCCTCCAGGAGGGTCGTCTGCCCGAGCATATGCAGGTTAAGAAGCGCGACTCCAAGGAGACCCTGAAAATGCGCCTCTCGAAAGCCGTTGAAGCGTGTCGCCAGGGAATGTCCCAGAATCATGCGGCGAACGTATTCGGTGTCCCCAAATCGACACTTTGGAGGCACCTTCAGAAACAGAAGGTAAAGAGCGAAATTATCGAAGAAGTCTCCCTCTCGATAGCCTCCTTTGCGAAAGATTCGAAGCAAGTTAAAGAGGAGCCAGTCAGAGAAGATCCATTGCCGAGCTAA
- Protein Sequence
- MNHLKWMGHADTVLEIQRGLFADSSTCDVTVSCGHGEKSHQAHRFILSSCSDYFRDMLADIPNGQETTIIIPDLKEAILDSVLKFIYLGEVSVRSSNLSEFLETMNLLGIKSAISFDCHLNKRKPTSVFTPVEVETIEVDKTPTEDEETAPVEGCAPKDFEYLEVYNEEAKIGQFTIEHIEQDSNGDYILGDNSENSFHLAAEEKSGDIKQDSLQFNEDTAGDDIVMKEEDEEDEEEEKSLDEKDKVDTSSFSDLMQSRNAAFDGAVRAVIECGMSLQKAATKFNISKTVLWRRVKKHPQYRIYRENPIIVSAIEKLQRGESLKSISSALDIPMSTLHRHKMRLLQEGRLPEHMQVKKRDSKETLKMRLSKAVEACRQGMSQNHAANVFGVPKSTLWRHLQKQKVKSEIIEEVSLSIASFAKDSKQVKEEPVREDPLPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01183739;
- 90% Identity
- iTF_00717925; iTF_00937426; iTF_00937190; iTF_01461303; iTF_01461060; iTF_01183739; iTF_01183951; iTF_00936701; iTF_00936464; iTF_00628158; iTF_00628502; iTF_01049567; iTF_01049804;
- 80% Identity
- iTF_00717925;