Basic Information

Insect: Eurois occulta
Gene Symbol: Bcl11a
Assembly: GCA_950022335.1
Location: OX465493.1:17127788-17138308[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.076 8 8.3 8.6 1 23 267 289 267 289 0.96

2 12 9.7e-06 0.001 20.5 1.9 2 23 297 318 296 318 0.95

3 12 0.083 8.7 8.2 0.3 1 23 322 344 322 344 0.97

4 12 0.00052 0.055 15.1 3.0 1 23 349 372 349 372 0.97

5 12 0.0017 0.17 13.5 0.2 3 23 378 399 377 399 0.96

6 12 0.013 1.4 10.7 0.1 2 20 415 433 415 435 0.93

7 12 0.009 0.95 11.2 0.1 3 23 449 470 449 470 0.95

8 12 0.00067 0.071 14.7 1.3 2 23 493 515 493 515 0.96

9 12 0.033 3.5 9.4 2.1 2 23 527 548 526 548 0.96

10 12 0.00022 0.023 16.3 4.9 1 23 554 576 554 576 0.99

11 12 2.7e-06 0.00028 22.3 0.3 1 23 582 604 582 604 0.98

12 12 0.00086 0.091 14.4 0.9 1 23 610 633 610 633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.076	8	8.3	8.6	1	23	267	289	267	289	0.96
2	12	9.7e-06	0.001	20.5	1.9	2	23	297	318	296	318	0.95
3	12	0.083	8.7	8.2	0.3	1	23	322	344	322	344	0.97
4	12	0.00052	0.055	15.1	3.0	1	23	349	372	349	372	0.97
5	12	0.0017	0.17	13.5	0.2	3	23	378	399	377	399	0.96
6	12	0.013	1.4	10.7	0.1	2	20	415	433	415	435	0.93
7	12	0.009	0.95	11.2	0.1	3	23	449	470	449	470	0.95
8	12	0.00067	0.071	14.7	1.3	2	23	493	515	493	515	0.96
9	12	0.033	3.5	9.4	2.1	2	23	527	548	526	548	0.96
10	12	0.00022	0.023	16.3	4.9	1	23	554	576	554	576	0.99
11	12	2.7e-06	0.00028	22.3	0.3	1	23	582	604	582	604	0.98
12	12	0.00086	0.091	14.4	0.9	1	23	610	633	610	633	0.98

Sequence Information

Coding Sequence: ATGGGAGACGTTCAAGTGTGTCGTATTTGTTTAAACATGGATGTAAAAATGCAGGACCTGTCTGCATACCCTTTAGAAACTTATTTTGCATCATTGATGATAGAAAgtaagCCTCTGTACACCAATTTGCCGCCGTATGCCTGTTATGAATGTACAGCGCTTGTGAAgaagttttatttattcagagaAAAGTGTCTGCAGAGCCAGGGTCTGCTGTGTGGAATAATTGATGAATGCGGGAAGTTAACACACATAGCAATAAAATCAATACCCAGAAAAAATCTCCTCACAGTTACAAATGTCACCAATATAAGCATAGAAGAAGATAGCACAACTGACTGCATCAGCCTAGAAAGACCTGAATTTGCTGTagaagtaataaaaaaagagGATCATGATGATATTGATATTCCTGATCATGTCAGTCCTGATAATAGTTccagtgatgatgatgatgatgaatgtgagAAGAATGACAAGAAGAAAATTCATGATGTGGAGAAGGTGGAGATTTCTGTGAAGATAAACATTGAAGAAGAGTCTGATGATCTTGAACTTCCCGAAACAACAGTTGATGTACCAAAATTGTCAATCAAAAAATCACTGTCAGTCCAGTCCAAGAAGGGAATAAGGCCAAAGAGGACTCGCACTACGGTTGCTAAGAAGAAGGTGAAGAAAGACGACACACAATGCGACGACCAGACTGATGATttgattaatgttattactCTATCGCTTGAAGAACAGTTAGAGGAGATGAACAAACGCAAGCAATCATCCAACTACCTCGAGTGTCCGTACAAGTGCCACCAGTGCTACAGGGGGTTCAACAACACGCACGCCTGGAAACATCACCTCACCAAACATTCTCCGAATCTCGGCGACATAGAGTGCAAAATCTGCAAGTATAGGTTTAAAACGAAACGAAATCTTCAGAGACACGCCCTAAACCACGGGAAGAGATACGTCTGCAATTTGTGTCCATACAACTCAAGTAATATAACTACTGTGAAGCAGCATCAAGGATCACATAAGGGAGTCACGCACAAGTGCAAATTCTGTGATGAAGTTTTCAATGTAAGAACAACATACGTCAGTCACATGCGAATAAAACATCCATCGGAAAATATTTGTGGTTTCTGTGGGTACTCGTTCTACAGCAAGCAAGGACTCGTCGTACATAAGAATATGATGCACAAGGAACTTGAAgcAAAACAAGAAGAGAACACAGAAGAAGGTCCATACTGCGAGGATTGTGACGTCAAGTTCATATCAACAGAGGCGTACAAGAGACATTTGGTCATGTCAGTCAAACACACCAGGAGTACAGTCTCTATGAACGGGTGTCGTGTTTGCGGCGACGTCTTCACAGACCCTGAGCAGTTACGTCTGCACAATCGTGAGGAGCATCCGAAGAAACAACCGAAGCATTACAATTATAATCGGAAGAGTCAAGTTCGGACGAAATGGCCTGCCAAGTGTCAACATTGTCCAGAGGAGTTTGCCACACCTCGCTCATACTGGAACCATTACCGACTCAAGCACCCTGACAAGTACGAGCCAGTGCGGAAGAATTGCGTCTGTGATATATGCGGCAAGAGATATGCGTGCAACGCCGTCCTAGAGCTGCACAAGCGCACGCACTTCGGGGAGCGTCCCTACAAGTGCTCCCAATGCGACAAGGCGTGCTTCTCGGCGCACGACCTGCGCGTCCATCAGCAGAAGCACTCCGACACCAGACCCTTCCCTTGCAGCGTGTGCTCACAGGCTTTCAAACGGAAAGAAGCGCTGGAACGGCATTTGAAAatCCATTCCGGCGACAACCCGTATAAGTGTGAGATATGCGGCGTAGCATTCGCCAAGTCTTGTACGAGAACACTCCACGTGCGCACAGTACACACTAAGGAACCTCCGCCGCCGCGCAAACGACGGAACAAGGTCAACAAATAA
Protein Sequence: MGDVQVCRICLNMDVKMQDLSAYPLETYFASLMIESKPLYTNLPPYACYECTALVKKFYLFREKCLQSQGLLCGIIDECGKLTHIAIKSIPRKNLLTVTNVTNISIEEDSTTDCISLERPEFAVEVIKKEDHDDIDIPDHVSPDNSSSDDDDDECEKNDKKKIHDVEKVEISVKINIEEESDDLELPETTVDVPKLSIKKSLSVQSKKGIRPKRTRTTVAKKKVKKDDTQCDDQTDDLINVITLSLEEQLEEMNKRKQSSNYLECPYKCHQCYRGFNNTHAWKHHLTKHSPNLGDIECKICKYRFKTKRNLQRHALNHGKRYVCNLCPYNSSNITTVKQHQGSHKGVTHKCKFCDEVFNVRTTYVSHMRIKHPSENICGFCGYSFYSKQGLVVHKNMMHKELEAKQEENTEEGPYCEDCDVKFISTEAYKRHLVMSVKHTRSTVSMNGCRVCGDVFTDPEQLRLHNREEHPKKQPKHYNYNRKSQVRTKWPAKCQHCPEEFATPRSYWNHYRLKHPDKYEPVRKNCVCDICGKRYACNAVLELHKRTHFGERPYKCSQCDKACFSAHDLRVHQQKHSDTRPFPCSVCSQAFKRKEALERHLKIHSGDNPYKCEICGVAFAKSCTRTLHVRTVHTKEPPPPRKRRNKVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00906431;
90% Identity: iTF_01084517; iTF_01085677; iTF_00928970; iTF_01063091; iTF_01534195; iTF_00301465; iTF_01064923; iTF_01533308; iTF_01062111; iTF_00302400;
80% Identity: -