Eocc027099.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eurois occulta
Gene Symbol
Zfy1
Assembly
GCA_950022335.1
Location
OX465497.1:833947-839855[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.67 70 5.3 0.1 6 23 282 300 282 300 0.95
2 14 0.13 14 7.6 0.2 2 23 309 331 308 331 0.92
3 14 8.2e-08 8.6e-06 27.1 1.0 2 23 354 375 354 375 0.97
4 14 4.5e-06 0.00047 21.6 1.4 1 23 381 404 381 404 0.96
5 14 0.0021 0.22 13.2 0.0 1 23 410 432 410 432 0.97
6 14 2.8e-05 0.0029 19.1 2.7 1 23 438 460 438 460 0.97
7 14 7.8 8.2e+02 2.0 0.4 1 9 466 474 466 476 0.89
8 14 0.16 17 7.2 3.6 1 23 587 609 587 609 0.95
9 14 0.00041 0.043 15.4 2.0 2 23 616 638 615 638 0.92
10 14 2.3e-06 0.00024 22.5 1.2 1 23 644 666 644 666 0.98
11 14 8.7e-07 9.1e-05 23.8 4.2 1 23 672 694 672 694 0.99
12 14 0.00012 0.013 17.1 0.2 1 23 700 722 700 722 0.98
13 14 0.002 0.21 13.2 0.3 1 23 728 750 728 750 0.91
14 14 0.00095 0.1 14.3 1.7 1 23 756 779 756 779 0.93

Sequence Information

Coding Sequence
atgaataatggaactgaacaaatatttttgctaAATGCTGCCCCAAATCAGTCTTCGGCCCCTACGCAGAGGATGAGCGCAATTGTGCCGCCGCCCAGCAGCACGCAGGTTAACCTTGATAATGTCGAAGACTTCTCACGTGTGTGTCGGATATGTGCCACCATCACAGAGCTTGTTATGCCCATACTATCTGGAGAGGGGCTGCAGAACAAACTGGGTAGTAAAATAAGGAAGCACTTACCAATAACGGTACGCGAAAGAGATGAGCTGCCGGTGGTAGTGTGCTACCAGTGCGCCAACACGCTGCTGGCGTGGCACGAGCTGGTCAAGTGCTGCGTGCAGGCCGACCTCGCGCTGCATGCCAAGATCGCCGCCAACAAACGGaaaacCAATCCACCTAACAACGTTATCGTAAAATCGAGTGCAATCGTTCAGGATGAACCACAGAGCAAGTTGTATTACAAGAGTGTCACAAATGCTCTTACTGAATTTAATCTGGACGAAGATGATACAGATGTAGAATTTGTTTGCCAAAAGTGTGTCGAGAAGCCAGCACTGACCACTACACAAACCCTCGCTGAACATATCCGCCACGACCACTCTCTCGACATTCTCAACAATGGTGTTAAAACATACATCACCAACCATGTAACGTTCGAACAAGTGCTAGCTGAAGATTCTGACAGAGAAACACAATCTGAGACTAAAGAGAAGCCCCAGGTTCTTCTGCCGAGCCTGCACTGTCCGTTCTGCGCGAGTGTGCAGTTCTCTTCGGCCACGCGGTTACTGTACCATCTCAACAGGCACGTTGAAGTGAGCATGGCTGACGGTGTCATCGAGTGTTGCGACCTCGTCTACAAGGACAAGAAACTCTTCGTACAGCACTTGCAAGAGGCACACGTCCACAGAACATTGGAGGAATCAGTGTGCGTCAGCTGTGGCTTCACGACTGACACATTCGACGAGTTGAAGCAGCACTATAATGATGCTCACAGCGATGTGAAAAGCACGAAAGAGAAGAAAGTTGAGAGCCCTAACAACCAAAAGTACATCCCGGCGGTATGCCCCGAGTGCAACAAGACGTTCTCCAACAAGTACAACATGTTCGCGCACATGCGCAGTCACTCGCGCGCCGCGGTCTACTCTTGCGACAAGTGCACGCGCACCTACAGCAACCAGGGCAACCTCACACAGCATCAGAAGCTCGTGCACCAAGGGATACTCAACTACATCTGCGGGGTGTGCGGGGAGGCCTTCCCGCGCCGCTCGGAGCGCGACACGCACGCGCGCCTGCACTCCGGCGAGAGGCCGCACCGCTGTCCGCACTGCGGCAAGGCGTACCGCGCCAAGAACACGCTCACCAAACACCTCGAGATACACGCAGACATACGCAAATACGAGTGCGAGATCTGCTCCAAGAAGAGCCCCTGCGACTCGCCCGAGGAGCCCCGCAGTGCGCTCTCTGACCGGTCCGAGCTGTCCGATGACGAGCCGCTCGCCACATTCGCTACTAGAAAGCCTACAACTCTCTATACCAACTTCTTCAATGCCCTCGTGAACTTTAGAGATCATTTTGTGAATGATCAACATCATGAGGATTATCCTGACTTCACGGACTCGAGTGTGTCGGACACTGAGGACAACGATGTGGATAGGTTCGACGACCTGACGCAGTGCAACATGCGGCGAGACCGGCTGGACGAGGAGGCGCGGCTGGAGCTGAGAGAGGTGCAGAACAAGATCGACAACAAGACGTACTACACGTGTAAGATCTGTAACAAGAACCTGAGCTCGGCGCACACGTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGACCGTGCGTGTGCCACGTCTGCGGCAAGCAGTTCCGCGCGCCCAACGGCCTGCAGCGCCACCTCACGGAGACACACGAGCGCCTGCGCCGGTACAACTGCAGCCTCTGCACCAAGAACTTCGCCAACTCGCAGAACCTCAAACAGCACATACGGATACACACCGGAGAGAAGCCTTACGTGTGCTCTCACTGCGGGAAGAGGTTCACGCAGAGCGGTTCGCTACACGTGCATCTGAAGACTCACAGTGAACAGTTCCCGTACGAGTGCGCGGAATGCGGGGCCAAGTTTAGGCTGCGGTCGGGGCTGGTGCGGCACCGGCTCAAGCACACGGGCGAGCGGCCGCACGCGTGCGCCACGTGCGGCGCCGGCTTCCGGCAGCGCCACGAGCTGCGCGCGCACGCCGCCGCGCACAGCGACGCCGCGCCGCACGCCTGCGCCGCCTGCCCGCGCGCCTTCCGCCAGCGCCGCGCGCTGCGGCACCACGTGCGGCGCGTGCACGAGGCCGAGCCGCCCGACCTGGCCTACACGCACGTCGCACACGACGCGCCCTACTAG
Protein Sequence
MNNGTEQIFLLNAAPNQSSAPTQRMSAIVPPPSSTQVNLDNVEDFSRVCRICATITELVMPILSGEGLQNKLGSKIRKHLPITVRERDELPVVVCYQCANTLLAWHELVKCCVQADLALHAKIAANKRKTNPPNNVIVKSSAIVQDEPQSKLYYKSVTNALTEFNLDEDDTDVEFVCQKCVEKPALTTTQTLAEHIRHDHSLDILNNGVKTYITNHVTFEQVLAEDSDRETQSETKEKPQVLLPSLHCPFCASVQFSSATRLLYHLNRHVEVSMADGVIECCDLVYKDKKLFVQHLQEAHVHRTLEESVCVSCGFTTDTFDELKQHYNDAHSDVKSTKEKKVESPNNQKYIPAVCPECNKTFSNKYNMFAHMRSHSRAAVYSCDKCTRTYSNQGNLTQHQKLVHQGILNYICGVCGEAFPRRSERDTHARLHSGERPHRCPHCGKAYRAKNTLTKHLEIHADIRKYECEICSKKSPCDSPEEPRSALSDRSELSDDEPLATFATRKPTTLYTNFFNALVNFRDHFVNDQHHEDYPDFTDSSVSDTEDNDVDRFDDLTQCNMRRDRLDEEARLELREVQNKIDNKTYYTCKICNKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERLRRYNCSLCTKNFANSQNLKQHIRIHTGEKPYVCSHCGKRFTQSGSLHVHLKTHSEQFPYECAECGAKFRLRSGLVRHRLKHTGERPHACATCGAGFRQRHELRAHAAAHSDAAPHACAACPRAFRQRRALRHHVRRVHEAEPPDLAYTHVAHDAPY