Oleu019293.1
Basic Information
- Insect
- Ochropleura leucogaster
- Gene Symbol
- Zfy1
- Assembly
- GCA_958449745.1
- Location
- OY288219.1:16728237-16738440[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.15 12 7.3 1.1 2 23 246 267 245 267 0.96 2 14 1.2 96 4.5 0.0 6 23 280 298 280 298 0.94 3 14 0.26 21 6.5 0.3 3 23 308 329 307 329 0.92 4 14 7.6e-08 6.1e-06 27.1 1.0 2 23 352 373 352 373 0.97 5 14 1e-05 0.00081 20.4 2.3 1 23 379 402 379 402 0.96 6 14 0.18 14 7.1 0.0 1 23 408 430 408 430 0.96 7 14 2.4e-05 0.0019 19.3 2.3 1 23 436 458 436 458 0.97 8 14 0.15 12 7.3 3.6 1 23 578 600 578 600 0.95 9 14 0.00038 0.031 15.5 2.0 2 23 607 629 606 629 0.92 10 14 2.1e-06 0.00017 22.5 1.2 1 23 635 657 635 657 0.98 11 14 1.2e-06 9.5e-05 23.3 4.4 1 23 663 685 663 685 0.98 12 14 0.00011 0.009 17.1 0.2 1 23 691 713 691 713 0.98 13 14 0.00056 0.045 14.9 0.8 1 23 719 741 719 741 0.93 14 14 0.00018 0.015 16.4 0.7 1 23 747 770 747 770 0.95
Sequence Information
- Coding Sequence
- atgaataatggaactgaacaaatatttttactaaactCTCCCCCGAGTCAGTCTTCGGCCTCTACGCAAAGAATGGGTGCCATTGCACCGCCACCTAGCACACAGGTTAACCTTGATAATGTCCAAGACTTCTCACATGTGTGTCGGACATGCGCCACCATCACGGAGTTGGTTATGCCCATATTCTCTGGAGAGGGGCTTCAGAACAAACTGGCTGATAAAATAAAGAAGCACTTACCAATAAAGGTACGCGAAGCAGACACGCTGCCACTGGTGGTGTGCTACCCGTGCGCCAACACGCTGCTGGCGTGGCACGAGTTGGTGAAGTGTTGTGTGCAGGCCGACGCCGCACTGCGCGCCAAACTCGCCTCCAACCAGCAGAAAACCAATCCACCTAACAACGTTACCGTAAAATCGAGTGCAAACGTCGAAGATGAACCGCGGGGCAAGTTGTATTACGAAAGTGTCAGGAATGCTCTTACTGAATTTAATCTGGACGAAGATGAAACAGATGTAGAATTTGTTTGTCAAAAGTGTGTTGAAAAGCCAGCACTGACCTCTACACAAACCCTCGCTGAACATATCCAGCACGACCACTCGCTCGACGTACTTAACAACGGTGTTAAAACATACATCACCAACCATGTAATGTTCGAACAAGTGTTAGCTGAAGATTCTGATAGAGAAACACAATCTGAGGCGAAAGAGAAGCCCCAAGTCGCTCTGCCGAGCCTGCATTGTCCCTTCTGCGCTAGTGTGTTCTCTTCGGCCACTCGGTTACTTTACCACCTCAACAAGCACGTCGAAGTGAACATGGTTGACGGCGGTGTGATGTGTTGCGACCTCGTCTACAACGACAAGAAACTTTTCGCACAGCACTTGCAAGCAGCGCACGTCGACAGGTCACCCGAGGAGCCAGTGTGCGTCAGCTGTGGCTTCACCACTGACAGAATCGACAAGTTAAAGCAGCACTATAAAGATGCTCACAGCGATGTGAAAAGCACGAAAGAGAAGAAAGTCGAGAGCCCAAACAACCAGAAGTACATCCCGGCGGTGTGCCCCGAGTGCAACAAGACGTTCTCCAATAAGTACAACATGTTTGCGCACATGCGTAGTCATTCGCGCACCGCGGTCTACCCGTGCGATAAGTGCACGCGCACCTACCGCAGCCAGGGCAATCTCACGCACCACCAGAAGCTGGCGCATCAGGGTATACTCGATTACATCTGCGGGGAGTGCGGAGACGCCTTTCCGCGCCGAGCCGAGCGCGATACGCACGCGCGCCTGCACTCCGGGGAGACGCCGCACAGCTGCCCGCACTGCGGCAAGGCGTACCGTGCCAAGAACTCGCTCACTAAACACCTCGAGATTCACGCAGGTATACGCAAATACGAGAGCCCCTGCGACTCGCCCGAGGAGCCCCGCAGTGCGCTCTCTGACCAGTCCGAGCTGTCCGATGATGAGCCGCTGGCCACATTCGCTACTAGAAAACCCACAAATCTCTATACCAACTTCTACAATGCCCTCGTGAACTTTAGAGATCATTTTGTGAATGATCAACATCAGGAGGATTATCCTGACTTCACTGATTCGAGTGTGTCGGACGTTGAGGTCAACGACGTGGATAGGTTCGACGACCTGACGCAGTGCAACATGCGGCGAGACCGGCTGGATGAGGAGACGCGGCTGGAGCTGAGAGAGGTGCAGAACAAAATCGATAACAAGACGTACTACACGTGTAAGATCTGCAACAAGAACCTGAGCTCGGCACACACGTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTTTGCCACGTATGCGGCAAGCAGTTCCGCGCGCCCAACGGCCTGCAGCGCCACCTCACGGAGACACACGAACGCCTGCGCCGGTACAATTGCAGTCTCTGCACCAAGAACTTCGCCAACTCGCAGAATCTCAAGCAGCACATACGGATACACACGGGAGAGAAGCCGTTCGTGTGCTCTCACTGCGGGAAGAGGTTCACGCAGAGCGGTTCGCTACACGTGCATCTGAAGACTCACAGTGAACAGTTTCCGTACGAGTGCGCGGAGTGCGGGGCCAAGTTCAGGCTGCGGTCGGGCCTCGTGCGGCACCGCCTCAAGCACACCGGCGAGCGGCCGCACGCCTGCGCCACTTGCGGCGCCGCCTTCCGCCAGCCGCACGAGCTGCGCGCGCACCACGCCGCGCACCAAGCCACTGCGCCGCACGCATGCGCGCTGTGCCCGCGCGCCTTCCGCCAGCGCCGCGCGCTGCGCCAGCACGAGCGCCGCGCGCACGACCCGCCCTACGCGCACGACCCACCCTACTAG
- Protein Sequence
- MNNGTEQIFLLNSPPSQSSASTQRMGAIAPPPSTQVNLDNVQDFSHVCRTCATITELVMPIFSGEGLQNKLADKIKKHLPIKVREADTLPLVVCYPCANTLLAWHELVKCCVQADAALRAKLASNQQKTNPPNNVTVKSSANVEDEPRGKLYYESVRNALTEFNLDEDETDVEFVCQKCVEKPALTSTQTLAEHIQHDHSLDVLNNGVKTYITNHVMFEQVLAEDSDRETQSEAKEKPQVALPSLHCPFCASVFSSATRLLYHLNKHVEVNMVDGGVMCCDLVYNDKKLFAQHLQAAHVDRSPEEPVCVSCGFTTDRIDKLKQHYKDAHSDVKSTKEKKVESPNNQKYIPAVCPECNKTFSNKYNMFAHMRSHSRTAVYPCDKCTRTYRSQGNLTHHQKLAHQGILDYICGECGDAFPRRAERDTHARLHSGETPHSCPHCGKAYRAKNSLTKHLEIHAGIRKYESPCDSPEEPRSALSDQSELSDDEPLATFATRKPTNLYTNFYNALVNFRDHFVNDQHQEDYPDFTDSSVSDVEVNDVDRFDDLTQCNMRRDRLDEETRLELREVQNKIDNKTYYTCKICNKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERLRRYNCSLCTKNFANSQNLKQHIRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYECAECGAKFRLRSGLVRHRLKHTGERPHACATCGAAFRQPHELRAHHAAHQATAPHACALCPRAFRQRRALRQHERRAHDPPYAHDPPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00712186;
- 90% Identity
- iTF_01085641;
- 80% Identity
- -